RNA–Protein interactions for RNA: ENST00000488025.1

CPA4-207, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-207ENST00000488025 LTBP4Q8N2S1 1624 aa14.42□□□□□ -0.1
CPA4-207ENST00000488025 C3P01024 1663 aa14.42□□□□□ -0.1
CPA4-207ENST00000488025 ARHGEF12Q9NZN5 1544 aa14.41□□□□□ -0.1
CPA4-207ENST00000488025 FHOD3Q2V2M9 1422 aa14.41□□□□□ -0.1
CPA4-207ENST00000488025 SAMD9Q5K651 1589 aa14.4□□□□□ -0.1
CPA4-207ENST00000488025 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.4□□□□□ -0.1
CPA4-207ENST00000488025 SUPT6HQ7KZ85 1726 aaKnown RBP14.37□□□□□ -0.11
CPA4-207ENST00000488025 NUP153P49790 1475 aaKnown RBP14.37□□□□□ -0.11
CPA4-207ENST00000488025 UHRF1BP1Q6BDS2 1440 aa14.34□□□□□ -0.11
CPA4-207ENST00000488025 DMRT2Q9Y5R5 561 aa14.34□□□□□ -0.11
CPA4-207ENST00000488025 MYO5CQ9NQX4 1742 aa14.33□□□□□ -0.12
CPA4-207ENST00000488025 PTPRTO14522 1441 aa14.32□□□□□ -0.12
CPA4-207ENST00000488025 ATP10AO60312 1499 aa14.31□□□□□ -0.12
CPA4-207ENST00000488025 MAGI2Q86UL8 1455 aa14.31□□□□□ -0.12
CPA4-207ENST00000488025 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
CPA4-207ENST00000488025 RANGAP1P46060 587 aaPredicted RBP14.3□□□□□ -0.12
CPA4-207ENST00000488025 FAM9AQ8IZU1 332 aaPredicted RBP14.3□□□□□ -0.12
CPA4-207ENST00000488025 MED1Q15648 1581 aaPredicted RBP14.3□□□□□ -0.12
CPA4-207ENST00000488025 C9orf84Q5VXU9 1444 aa14.29□□□□□ -0.12
CPA4-207ENST00000488025 SCAPERQ9BY12 1400 aa14.29□□□□□ -0.12
CPA4-207ENST00000488025 IQSEC2Q5JU85 1478 aa14.28□□□□□ -0.12
CPA4-207ENST00000488025 ABCA6Q8N139 1617 aa14.26□□□□□ -0.13
CPA4-207ENST00000488025 CDK13Q14004 1512 aaKnown RBP14.26□□□□□ -0.13
CPA4-207ENST00000488025 CAMSAP1Q5T5Y3 1602 aa14.26□□□□□ -0.13
CPA4-207ENST00000488025 DIP2CQ9Y2E4 1556 aa14.26□□□□□ -0.13
CPA4-207ENST00000488025 PLEKHD1A6NEE1 506 aa14.25□□□□□ -0.13
CPA4-207ENST00000488025 UBAP1LF5GYI3 381 aa14.25□□□□□ -0.13
CPA4-207ENST00000488025 NCOA1Q15788 1441 aa14.23□□□□□ -0.13
CPA4-207ENST00000488025 KIF14Q15058 1648 aa14.23□□□□□ -0.13
CPA4-207ENST00000488025 ZNF335Q9H4Z2 1342 aaPredicted RBP14.22□□□□□ -0.13
CPA4-207ENST00000488025 CDC42BPBQ9Y5S2 1711 aa14.21□□□□□ -0.14
CPA4-207ENST00000488025 KDM5CP41229 1560 aa14.19□□□□□ -0.14
CPA4-207ENST00000488025 LRRIQ1Q96JM4 1722 aa14.18□□□□□ -0.14
CPA4-207ENST00000488025 NCKAP5LQ9HCH0 1330 aa14.18□□□□□ -0.14
CPA4-207ENST00000488025 PLCH2O75038 1416 aa14.18□□□□□ -0.14
CPA4-207ENST00000488025 MYT1LQ9UL68 1186 aa14.18□□□□□ -0.14
CPA4-207ENST00000488025 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
CPA4-207ENST00000488025 ZNF142P52746 1687 aaPredicted RBP14.17□□□□□ -0.14
CPA4-207ENST00000488025 CLTCQ00610 1675 aaKnown RBP14.17□□□□□ -0.14
CPA4-207ENST00000488025 MYO3AQ8NEV4 1616 aa14.16□□□□□ -0.14
CPA4-207ENST00000488025 HSPA1LP34931 641 aa14.16□□□□□ -0.14
CPA4-207ENST00000488025 MROH2AA6NES4 1674 aa14.16□□□□□ -0.14
CPA4-207ENST00000488025 ITSN2Q9NZM3 1697 aa14.16□□□□□ -0.14
CPA4-207ENST00000488025 KIDINS220Q9ULH0 1771 aa14.16□□□□□ -0.14
CPA4-207ENST00000488025 REREQ9P2R6 1566 aa14.15□□□□□ -0.14
CPA4-207ENST00000488025 AFAP1Q8N556 730 aa14.15□□□□□ -0.14
CPA4-207ENST00000488025 TRAPPC8Q9Y2L5 1435 aa14.15□□□□□ -0.14
CPA4-207ENST00000488025 ZNF518AQ6AHZ1 1483 aa14.14□□□□□ -0.15
CPA4-207ENST00000488025 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
CPA4-207ENST00000488025 ARHGAP5Q13017 1502 aa14.14□□□□□ -0.15
CPA4-207ENST00000488025 POLR1AO95602 1720 aaPredicted RBP14.13□□□□□ -0.15
CPA4-207ENST00000488025 ESF1Q9H501 851 aaKnown RBP14.11□□□□□ -0.15
CPA4-207ENST00000488025 EFCAB2Q5VUJ9 269 aa14.1□□□□□ -0.15
CPA4-207ENST00000488025 AGLP35573 1532 aa14.1□□□□□ -0.15
CPA4-207ENST00000488025 CEP170BQ9Y4F5 1589 aaPredicted RBP14.09□□□□□ -0.15
CPA4-207ENST00000488025 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
CPA4-207ENST00000488025 ATP1B4Q9UN42 357 aaPredicted RBP14.07□□□□□ -0.16
CPA4-207ENST00000488025 PREX2Q70Z35 1606 aa14.07□□□□□ -0.16
CPA4-207ENST00000488025 ALKQ9UM73 1620 aa14.05□□□□□ -0.16
CPA4-207ENST00000488025 ABCC1P33527 1531 aa14.05□□□□□ -0.16
CPA4-207ENST00000488025 SETD1AO15047 1707 aaKnown RBP14.04□□□□□ -0.16
CPA4-207ENST00000488025 STRCP1A6NGW2 1772 aa14.04□□□□□ -0.16
CPA4-207ENST00000488025 MLH3Q9UHC1 1453 aa14.04□□□□□ -0.16
CPA4-207ENST00000488025 TCOF1Q13428 1488 aaKnown RBP14.03□□□□□ -0.16
CPA4-207ENST00000488025 DNMT1P26358 1616 aaKnown RBP14.02□□□□□ -0.16
CPA4-207ENST00000488025 NPATQ14207 1427 aa14.02□□□□□ -0.16
CPA4-207ENST00000488025 CNTLNQ9NXG0 1405 aa14.02□□□□□ -0.16
CPA4-207ENST00000488025 NEURL4Q96JN8 1562 aa14.01□□□□□ -0.17
CPA4-207ENST00000488025 PLA2R1Q13018 1463 aa14.01□□□□□ -0.17
CPA4-207ENST00000488025 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
CPA4-207ENST00000488025 ZMYM3Q14202 1370 aa14□□□□□ -0.17
CPA4-207ENST00000488025 PPP6R1Q9UPN7 881 aa14□□□□□ -0.17
CPA4-207ENST00000488025 SAMD9LQ8IVG5 1584 aa13.98□□□□□ -0.17
CPA4-207ENST00000488025 PKD2Q13563 968 aa13.97□□□□□ -0.17
CPA4-207ENST00000488025 CPS1P31327 1500 aa13.96□□□□□ -0.17
CPA4-207ENST00000488025 TOM1O60784 492 aa13.96□□□□□ -0.17
CPA4-207ENST00000488025 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
CPA4-207ENST00000488025 TROQ12816 1431 aaPredicted RBP13.96□□□□□ -0.18
CPA4-207ENST00000488025 PTPRKQ15262 1439 aa13.96□□□□□ -0.18
CPA4-207ENST00000488025 CFAP65Q6ZU64 1925 aaKnown RBP13.96□□□□□ -0.18
CPA4-207ENST00000488025 XIRP1Q702N8 1843 aaKnown RBP13.95□□□□□ -0.18
CPA4-207ENST00000488025 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
CPA4-207ENST00000488025 VWDEQ8N2E2 1590 aa13.95□□□□□ -0.18
CPA4-207ENST00000488025 RGS17Q9UGC6 210 aaPredicted RBP13.94□□□□□ -0.18
CPA4-207ENST00000488025 SYCP2Q9BX26 1530 aa13.93□□□□□ -0.18
CPA4-207ENST00000488025 A2ML1A8K2U0 1454 aa13.92□□□□□ -0.18
CPA4-207ENST00000488025 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
CPA4-207ENST00000488025 INO80Q9ULG1 1556 aaPredicted RBP13.92□□□□□ -0.18
CPA4-207ENST00000488025 CLIP1P30622 1438 aa13.91□□□□□ -0.18
CPA4-207ENST00000488025 ATP7AQ04656 1500 aa13.91□□□□□ -0.18
CPA4-207ENST00000488025 ADGBQ8N7X0 1667 aa13.91□□□□□ -0.18
CPA4-207ENST00000488025 IQGAP1P46940 1657 aa13.9□□□□□ -0.18
CPA4-207ENST00000488025 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.19
CPA4-207ENST00000488025 CDK11AQ9UQ88 783 aaPredicted RBP13.89□□□□□ -0.19
CPA4-207ENST00000488025 ARHGAP35Q9NRY4 1499 aa13.88□□□□□ -0.19
CPA4-207ENST00000488025 GGT6Q6P531 493 aa13.88□□□□□ -0.19
CPA4-207ENST00000488025 ZNF777Q9ULD5 760 aaPredicted RBP13.88□□□□□ -0.19
CPA4-207ENST00000488025 FMN1Q68DA7 1419 aa13.87□□□□□ -0.19
CPA4-207ENST00000488025 HNRNPMP52272 730 aaKnown RBP eCLIP13.85□□□□□ -0.19
CPA4-207ENST00000488025 POTEAQ6S8J7 498 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms