RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 HSPA1LP34931 641 aa13.69□□□□□ -0.22
RTCB-205ENST00000487704 ARID3CA6NKF2 412 aa13.68□□□□□ -0.22
RTCB-205ENST00000487704 NCOA1Q15788 1441 aa13.67□□□□□ -0.22
RTCB-205ENST00000487704 PHF23Q9BUL5 403 aaPredicted RBP13.67□□□□□ -0.22
RTCB-205ENST00000487704 SUPT5HO00267 1087 aaKnown RBP13.65□□□□□ -0.22
RTCB-205ENST00000487704 ATP10AO60312 1499 aa13.65□□□□□ -0.22
RTCB-205ENST00000487704 ZNF335Q9H4Z2 1342 aaPredicted RBP13.64□□□□□ -0.23
RTCB-205ENST00000487704 C9orf84Q5VXU9 1444 aa13.62□□□□□ -0.23
RTCB-205ENST00000487704 TRAPPC8Q9Y2L5 1435 aa13.62□□□□□ -0.23
RTCB-205ENST00000487704 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
RTCB-205ENST00000487704 CFAP74Q9C0B2 1584 aa13.61□□□□□ -0.23
RTCB-205ENST00000487704 TOM1O60784 492 aa13.59□□□□□ -0.23
RTCB-205ENST00000487704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
RTCB-205ENST00000487704 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
RTCB-205ENST00000487704 CTTNBP2Q8WZ74 1663 aa13.56□□□□□ -0.24
RTCB-205ENST00000487704 PIP4K2BP78356 416 aa13.56□□□□□ -0.24
RTCB-205ENST00000487704 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
RTCB-205ENST00000487704 SCAPERQ9BY12 1400 aa13.56□□□□□ -0.24
RTCB-205ENST00000487704 PLEKHD1A6NEE1 506 aa13.55□□□□□ -0.24
RTCB-205ENST00000487704 PKD2Q13563 968 aa13.55□□□□□ -0.24
RTCB-205ENST00000487704 NCKAP5LQ9HCH0 1330 aa13.55□□□□□ -0.24
RTCB-205ENST00000487704 CAMSAP1Q5T5Y3 1602 aa13.54□□□□□ -0.24
RTCB-205ENST00000487704 C3P01024 1663 aa13.53□□□□□ -0.24
RTCB-205ENST00000487704 RGS17Q9UGC6 210 aaPredicted RBP13.53□□□□□ -0.24
RTCB-205ENST00000487704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.52□□□□□ -0.25
RTCB-205ENST00000487704 P3H3Q8IVL6 736 aa13.51□□□□□ -0.25
RTCB-205ENST00000487704 ESF1Q9H501 851 aaKnown RBP13.5□□□□□ -0.25
RTCB-205ENST00000487704 RAPGEF6Q8TEU7 1601 aa13.5□□□□□ -0.25
RTCB-205ENST00000487704 NPATQ14207 1427 aa13.49□□□□□ -0.25
RTCB-205ENST00000487704 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
RTCB-205ENST00000487704 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
RTCB-205ENST00000487704 PLCH2O75038 1416 aa13.47□□□□□ -0.25
RTCB-205ENST00000487704 PPP6R1Q9UPN7 881 aa13.47□□□□□ -0.25
RTCB-205ENST00000487704 TCOF1Q13428 1488 aaKnown RBP13.47□□□□□ -0.25
RTCB-205ENST00000487704 CNTLNQ9NXG0 1405 aa13.47□□□□□ -0.25
RTCB-205ENST00000487704 REREQ9P2R6 1566 aa13.46□□□□□ -0.25
RTCB-205ENST00000487704 AGLP35573 1532 aa13.46□□□□□ -0.25
RTCB-205ENST00000487704 PTPRKQ15262 1439 aa13.45□□□□□ -0.26
RTCB-205ENST00000487704 CPS1P31327 1500 aa13.44□□□□□ -0.26
RTCB-205ENST00000487704 EFCAB2Q5VUJ9 269 aa13.44□□□□□ -0.26
RTCB-205ENST00000487704 ZNF518AQ6AHZ1 1483 aa13.43□□□□□ -0.26
RTCB-205ENST00000487704 AFAP1Q8N556 730 aa13.42□□□□□ -0.26
RTCB-205ENST00000487704 POTEAQ6S8J7 498 aa13.4□□□□□ -0.26
RTCB-205ENST00000487704 ZMYM3Q14202 1370 aa13.4□□□□□ -0.26
RTCB-205ENST00000487704 PRXQ9BXM0 1461 aa13.4□□□□□ -0.26
RTCB-205ENST00000487704 KDM5CP41229 1560 aa13.4□□□□□ -0.26
RTCB-205ENST00000487704 ALKQ9UM73 1620 aa13.39□□□□□ -0.27
RTCB-205ENST00000487704 SHANK2Q9UPX8 1470 aa13.39□□□□□ -0.27
RTCB-205ENST00000487704 DIP2CQ9Y2E4 1556 aa13.39□□□□□ -0.27
RTCB-205ENST00000487704 SAMD9Q5K651 1589 aa13.38□□□□□ -0.27
RTCB-205ENST00000487704 MLH3Q9UHC1 1453 aa13.37□□□□□ -0.27
RTCB-205ENST00000487704 MYT1LQ9UL68 1186 aa13.37□□□□□ -0.27
RTCB-205ENST00000487704 ZNF142P52746 1687 aaPredicted RBP13.36□□□□□ -0.27
RTCB-205ENST00000487704 SRCAPQ6ZRS2 3230 aa13.36□□□□□ -0.27
RTCB-205ENST00000487704 MROH2AA6NES4 1674 aa13.35□□□□□ -0.27
RTCB-205ENST00000487704 CEP170BQ9Y4F5 1589 aaPredicted RBP13.33□□□□□ -0.28
RTCB-205ENST00000487704 ABCA6Q8N139 1617 aa13.31□□□□□ -0.28
RTCB-205ENST00000487704 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
RTCB-205ENST00000487704 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
RTCB-205ENST00000487704 SUPT6HQ7KZ85 1726 aaKnown RBP13.3□□□□□ -0.28
RTCB-205ENST00000487704 SENP3Q9H4L4 574 aaPredicted RBP13.29□□□□□ -0.28
RTCB-205ENST00000487704 VWDEQ8N2E2 1590 aa13.27□□□□□ -0.29
RTCB-205ENST00000487704 MYO5CQ9NQX4 1742 aa13.27□□□□□ -0.29
RTCB-205ENST00000487704 A2ML1A8K2U0 1454 aa13.26□□□□□ -0.29
RTCB-205ENST00000487704 NEURL4Q96JN8 1562 aa13.25□□□□□ -0.29
RTCB-205ENST00000487704 DNMT1P26358 1616 aaKnown RBP13.24□□□□□ -0.29
RTCB-205ENST00000487704 ANKLE2Q86XL3 938 aa13.24□□□□□ -0.29
RTCB-205ENST00000487704 ARHGAP5Q13017 1502 aa13.23□□□□□ -0.29
RTCB-205ENST00000487704 CDK13Q14004 1512 aaKnown RBP13.22□□□□□ -0.29
RTCB-205ENST00000487704 LRRC7Q96NW7 1537 aa13.22□□□□□ -0.29
RTCB-205ENST00000487704 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
RTCB-205ENST00000487704 POLR1AO95602 1720 aaPredicted RBP13.22□□□□□ -0.29
RTCB-205ENST00000487704 CDK11AQ9UQ88 783 aaPredicted RBP13.21□□□□□ -0.29
RTCB-205ENST00000487704 KIDINS220Q9ULH0 1771 aa13.21□□□□□ -0.29
RTCB-205ENST00000487704 MED14O60244 1454 aa13.21□□□□□ -0.3
RTCB-205ENST00000487704 RNF17Q9BXT8 1623 aaKnown RBP13.2□□□□□ -0.3
RTCB-205ENST00000487704 FAM135BQ49AJ0 1406 aa13.19□□□□□ -0.3
RTCB-205ENST00000487704 CLTCQ00610 1675 aaKnown RBP13.18□□□□□ -0.3
RTCB-205ENST00000487704 NPHP4O75161 1426 aaPredicted RBP13.17□□□□□ -0.3
RTCB-205ENST00000487704 THEMISQ8N1K5 641 aaPredicted RBP13.17□□□□□ -0.3
RTCB-205ENST00000487704 ABCC1P33527 1531 aa13.15□□□□□ -0.3
RTCB-205ENST00000487704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.15□□□□□ -0.3
RTCB-205ENST00000487704 DEPDC5O75140 1603 aa13.14□□□□□ -0.31
RTCB-205ENST00000487704 KIF14Q15058 1648 aa13.14□□□□□ -0.31
RTCB-205ENST00000487704 RANGAP1P46060 587 aaPredicted RBP13.14□□□□□ -0.31
RTCB-205ENST00000487704 GGT6Q6P531 493 aa13.14□□□□□ -0.31
RTCB-205ENST00000487704 SYNMO15061 1565 aa13.14□□□□□ -0.31
RTCB-205ENST00000487704 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
RTCB-205ENST00000487704 STRCP1A6NGW2 1772 aa13.13□□□□□ -0.31
RTCB-205ENST00000487704 TNRQ92752 1358 aa13.12□□□□□ -0.31
RTCB-205ENST00000487704 CDC42BPBQ9Y5S2 1711 aa13.12□□□□□ -0.31
RTCB-205ENST00000487704 ITSN2Q9NZM3 1697 aa13.11□□□□□ -0.31
RTCB-205ENST00000487704 SPAG9O60271 1321 aaKnown RBP13.11□□□□□ -0.31
RTCB-205ENST00000487704 CLIP1P30622 1438 aa13.1□□□□□ -0.31
RTCB-205ENST00000487704 PLXNC1O60486 1568 aa13.1□□□□□ -0.31
RTCB-205ENST00000487704 SAMD9LQ8IVG5 1584 aa13.1□□□□□ -0.31
RTCB-205ENST00000487704 FBXO31Q5XUX0 539 aaPredicted RBP13.09□□□□□ -0.31
RTCB-205ENST00000487704 ZNF772Q68DY9 489 aaPredicted RBP13.09□□□□□ -0.31
RTCB-205ENST00000487704 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
RTCB-205ENST00000487704 A2MP01023 1474 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms