RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 SETD1BQ9UPS6 1966 aaKnown RBP21.56■■□□□ 1.04
SGIP1-212ENST00000487507 LTBP4Q8N2S1 1624 aa21.56■■□□□ 1.04
SGIP1-212ENST00000487507 UHRF1BP1Q6BDS2 1440 aa21.55■■□□□ 1.04
SGIP1-212ENST00000487507 PTPRTO14522 1441 aa21.5■■□□□ 1.03
SGIP1-212ENST00000487507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.5■■□□□ 1.03
SGIP1-212ENST00000487507 C3P01024 1663 aa21.49■■□□□ 1.03
SGIP1-212ENST00000487507 MAGI2Q86UL8 1455 aa21.48■■□□□ 1.03
SGIP1-212ENST00000487507 NUP153P49790 1475 aaKnown RBP21.46■■□□□ 1.03
SGIP1-212ENST00000487507 IQSEC2Q5JU85 1478 aa21.46■■□□□ 1.03
SGIP1-212ENST00000487507 SAMD9Q5K651 1589 aa21.45■■□□□ 1.02
SGIP1-212ENST00000487507 ATP10AO60312 1499 aa21.45■■□□□ 1.02
SGIP1-212ENST00000487507 UBAP1LF5GYI3 381 aa21.44■■□□□ 1.02
SGIP1-212ENST00000487507 C9orf84Q5VXU9 1444 aa21.44■■□□□ 1.02
SGIP1-212ENST00000487507 MED1Q15648 1581 aaPredicted RBP21.42■■□□□ 1.02
SGIP1-212ENST00000487507 SCAPERQ9BY12 1400 aa21.41■■□□□ 1.02
SGIP1-212ENST00000487507 PLEKHD1A6NEE1 506 aa21.41■■□□□ 1.02
SGIP1-212ENST00000487507 RANGAP1P46060 587 aaPredicted RBP21.39■■□□□ 1.01
SGIP1-212ENST00000487507 PRXQ9BXM0 1461 aa21.37■■□□□ 1.01
SGIP1-212ENST00000487507 SUPT6HQ7KZ85 1726 aaKnown RBP21.35■■□□□ 1.01
SGIP1-212ENST00000487507 NCOA1Q15788 1441 aa21.34■■□□□ 1.01
SGIP1-212ENST00000487507 ZNF335Q9H4Z2 1342 aaPredicted RBP21.33■■□□□ 1.01
SGIP1-212ENST00000487507 SCAF1Q9H7N4 1312 aaKnown RBP21.33■■□□□ 1.01
SGIP1-212ENST00000487507 MYO5CQ9NQX4 1742 aa21.33■■□□□ 1.01
SGIP1-212ENST00000487507 MYT1LQ9UL68 1186 aa21.33■■□□□ 1.01
SGIP1-212ENST00000487507 CAMSAP1Q5T5Y3 1602 aa21.33■■□□□ 1
SGIP1-212ENST00000487507 NCKAP5LQ9HCH0 1330 aa21.28■■□□□ 1
SGIP1-212ENST00000487507 DIP2CQ9Y2E4 1556 aa21.27■■□□□ 1
SGIP1-212ENST00000487507 HSPA1LP34931 641 aa21.27■■□□□ 1
SGIP1-212ENST00000487507 ESF1Q9H501 851 aaKnown RBP21.27■■□□□ 1
SGIP1-212ENST00000487507 CDK13Q14004 1512 aaKnown RBP21.26■□□□□ 0.99
SGIP1-212ENST00000487507 PIP4K2BP78356 416 aa21.26■□□□□ 0.99
SGIP1-212ENST00000487507 PLCH2O75038 1416 aa21.25■□□□□ 0.99
SGIP1-212ENST00000487507 PHF23Q9BUL5 403 aaPredicted RBP21.25■□□□□ 0.99
SGIP1-212ENST00000487507 TRAPPC8Q9Y2L5 1435 aa21.25■□□□□ 0.99
SGIP1-212ENST00000487507 ABCA6Q8N139 1617 aa21.25■□□□□ 0.99
SGIP1-212ENST00000487507 ZNF518AQ6AHZ1 1483 aa21.2■□□□□ 0.98
SGIP1-212ENST00000487507 AFAP1Q8N556 730 aa21.2■□□□□ 0.98
SGIP1-212ENST00000487507 KDM5CP41229 1560 aa21.19■□□□□ 0.98
SGIP1-212ENST00000487507 EFCAB2Q5VUJ9 269 aa21.18■□□□□ 0.98
SGIP1-212ENST00000487507 KIF14Q15058 1648 aa21.16■□□□□ 0.98
SGIP1-212ENST00000487507 REREQ9P2R6 1566 aa21.16■□□□□ 0.98
SGIP1-212ENST00000487507 ARHGAP5Q13017 1502 aa21.15■□□□□ 0.98
SGIP1-212ENST00000487507 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
SGIP1-212ENST00000487507 MYO3AQ8NEV4 1616 aa21.14■□□□□ 0.97
SGIP1-212ENST00000487507 MROH2AA6NES4 1674 aa21.13■□□□□ 0.97
SGIP1-212ENST00000487507 ZNF142P52746 1687 aaPredicted RBP21.12■□□□□ 0.97
SGIP1-212ENST00000487507 AGLP35573 1532 aa21.11■□□□□ 0.97
SGIP1-212ENST00000487507 CLTCQ00610 1675 aaKnown RBP21.1■□□□□ 0.97
SGIP1-212ENST00000487507 ATP1B4Q9UN42 357 aaPredicted RBP21.1■□□□□ 0.97
SGIP1-212ENST00000487507 CDC42BPBQ9Y5S2 1711 aa21.09■□□□□ 0.97
SGIP1-212ENST00000487507 CNTLNQ9NXG0 1405 aa21.08■□□□□ 0.97
SGIP1-212ENST00000487507 KIDINS220Q9ULH0 1771 aa21.07■□□□□ 0.96
SGIP1-212ENST00000487507 CEP170BQ9Y4F5 1589 aaPredicted RBP21.06■□□□□ 0.96
SGIP1-212ENST00000487507 TOM1O60784 492 aa21.06■□□□□ 0.96
SGIP1-212ENST00000487507 PPP6R1Q9UPN7 881 aa21.06■□□□□ 0.96
SGIP1-212ENST00000487507 ITSN2Q9NZM3 1697 aa21.05■□□□□ 0.96
SGIP1-212ENST00000487507 NPATQ14207 1427 aa21.05■□□□□ 0.96
SGIP1-212ENST00000487507 PKD2Q13563 968 aa21.04■□□□□ 0.96
SGIP1-212ENST00000487507 POLR1AO95602 1720 aaPredicted RBP21.04■□□□□ 0.96
SGIP1-212ENST00000487507 PLA2R1Q13018 1463 aa21.03■□□□□ 0.96
SGIP1-212ENST00000487507 TCOF1Q13428 1488 aaKnown RBP21.03■□□□□ 0.96
SGIP1-212ENST00000487507 MLH3Q9UHC1 1453 aa21.03■□□□□ 0.96
SGIP1-212ENST00000487507 ZMYM3Q14202 1370 aa21.01■□□□□ 0.95
SGIP1-212ENST00000487507 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
SGIP1-212ENST00000487507 LRRIQ1Q96JM4 1722 aa20.97■□□□□ 0.95
SGIP1-212ENST00000487507 CPS1P31327 1500 aa20.97■□□□□ 0.95
SGIP1-212ENST00000487507 ABCC1P33527 1531 aa20.97■□□□□ 0.95
SGIP1-212ENST00000487507 PREX2Q70Z35 1606 aa20.96■□□□□ 0.95
SGIP1-212ENST00000487507 ALKQ9UM73 1620 aa20.95■□□□□ 0.94
SGIP1-212ENST00000487507 DNMT1P26358 1616 aaKnown RBP20.93■□□□□ 0.94
SGIP1-212ENST00000487507 SHANK2Q9UPX8 1470 aa20.93■□□□□ 0.94
SGIP1-212ENST00000487507 SETD1AO15047 1707 aaKnown RBP20.91■□□□□ 0.94
SGIP1-212ENST00000487507 NEURL4Q96JN8 1562 aa20.91■□□□□ 0.94
SGIP1-212ENST00000487507 CDK11AQ9UQ88 783 aaPredicted RBP20.91■□□□□ 0.94
SGIP1-212ENST00000487507 TROQ12816 1431 aaPredicted RBP20.9■□□□□ 0.94
SGIP1-212ENST00000487507 PTPRKQ15262 1439 aa20.9■□□□□ 0.94
SGIP1-212ENST00000487507 RGS17Q9UGC6 210 aaPredicted RBP20.9■□□□□ 0.94
SGIP1-212ENST00000487507 CLIP1P30622 1438 aa20.89■□□□□ 0.94
SGIP1-212ENST00000487507 CDC42BPAQ5VT25 1732 aa20.89■□□□□ 0.93
SGIP1-212ENST00000487507 SAMD9LQ8IVG5 1584 aa20.87■□□□□ 0.93
SGIP1-212ENST00000487507 VWDEQ8N2E2 1590 aa20.85■□□□□ 0.93
SGIP1-212ENST00000487507 A2ML1A8K2U0 1454 aa20.85■□□□□ 0.93
SGIP1-212ENST00000487507 STRCP1A6NGW2 1772 aa20.85■□□□□ 0.93
SGIP1-212ENST00000487507 GGT6Q6P531 493 aa20.83■□□□□ 0.93
SGIP1-212ENST00000487507 EHMT2Q96KQ7 1210 aa20.81■□□□□ 0.92
SGIP1-212ENST00000487507 ZNF777Q9ULD5 760 aaPredicted RBP20.81■□□□□ 0.92
SGIP1-212ENST00000487507 FMN1Q68DA7 1419 aa20.79■□□□□ 0.92
SGIP1-212ENST00000487507 SYCP2Q9BX26 1530 aa20.79■□□□□ 0.92
SGIP1-212ENST00000487507 RNF17Q9BXT8 1623 aaKnown RBP20.79■□□□□ 0.92
SGIP1-212ENST00000487507 PLXNC1O60486 1568 aa20.78■□□□□ 0.92
SGIP1-212ENST00000487507 ATP7AQ04656 1500 aa20.78■□□□□ 0.92
SGIP1-212ENST00000487507 SPAG9O60271 1321 aaKnown RBP20.78■□□□□ 0.92
SGIP1-212ENST00000487507 POTEAQ6S8J7 498 aa20.77■□□□□ 0.92
SGIP1-212ENST00000487507 IQGAP1P46940 1657 aa20.75■□□□□ 0.91
SGIP1-212ENST00000487507 A2MP01023 1474 aa20.75■□□□□ 0.91
SGIP1-212ENST00000487507 INO80Q9ULG1 1556 aaPredicted RBP20.74■□□□□ 0.91
SGIP1-212ENST00000487507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.73■□□□□ 0.91
SGIP1-212ENST00000487507 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.91
SGIP1-212ENST00000487507 ADGBQ8N7X0 1667 aa20.73■□□□□ 0.91
SGIP1-212ENST00000487507 LRRC7Q96NW7 1537 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms