RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DNMT1P26358 1616 aaKnown RBP25.64■■□□□ 1.69
PDLIM7-207ENST00000486828 DENND4BO75064 1496 aaPredicted RBP25.63■■□□□ 1.69
PDLIM7-207ENST00000486828 ROCK1Q13464 1354 aa25.63■■□□□ 1.69
PDLIM7-207ENST00000486828 KDM5BQ9UGL1 1544 aa25.61■■□□□ 1.69
PDLIM7-207ENST00000486828 TROQ12816 1431 aaPredicted RBP25.61■■□□□ 1.69
PDLIM7-207ENST00000486828 PLB1Q6P1J6 1458 aa25.59■■□□□ 1.69
PDLIM7-207ENST00000486828 ABCC5O15440 1437 aa25.59■■□□□ 1.69
PDLIM7-207ENST00000486828 DDX10Q13206 875 aaKnown RBP25.59■■□□□ 1.69
PDLIM7-207ENST00000486828 TRIM52Q96A61 297 aa25.57■■□□□ 1.68
PDLIM7-207ENST00000486828 ADCY10Q96PN6 1610 aa25.56■■□□□ 1.68
PDLIM7-207ENST00000486828 ITSN2Q9NZM3 1697 aa25.55■■□□□ 1.68
PDLIM7-207ENST00000486828 MPHOSPH9Q99550 1183 aa25.53■■□□□ 1.68
PDLIM7-207ENST00000486828 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
PDLIM7-207ENST00000486828 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
PDLIM7-207ENST00000486828 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
PDLIM7-207ENST00000486828 ZNF644Q9H582 1327 aaPredicted RBP25.52■■□□□ 1.68
PDLIM7-207ENST00000486828 HIRIP3Q9BW71 556 aaPredicted RBP25.51■■□□□ 1.67
PDLIM7-207ENST00000486828 PTPRGP23470 1445 aa25.5■■□□□ 1.67
PDLIM7-207ENST00000486828 MYT1Q01538 1121 aa25.5■■□□□ 1.67
PDLIM7-207ENST00000486828 CAMSAP2Q08AD1 1489 aa25.49■■□□□ 1.67
PDLIM7-207ENST00000486828 KIF14Q15058 1648 aa25.49■■□□□ 1.67
PDLIM7-207ENST00000486828 GPATCH8Q9UKJ3 1502 aaKnown RBP25.48■■□□□ 1.67
PDLIM7-207ENST00000486828 ABCA8O94911 1581 aa25.47■■□□□ 1.67
PDLIM7-207ENST00000486828 CFDP1Q9UEE9 299 aaPredicted RBP25.45■■□□□ 1.66
PDLIM7-207ENST00000486828 KCNH8Q96L42 1107 aa25.44■■□□□ 1.66
PDLIM7-207ENST00000486828 CYB5RLQ6IPT4 315 aa25.43■■□□□ 1.66
PDLIM7-207ENST00000486828 ADGBQ8N7X0 1667 aa25.43■■□□□ 1.66
PDLIM7-207ENST00000486828 CROCC2H7BZ55 1655 aa25.41■■□□□ 1.66
PDLIM7-207ENST00000486828 ANKRD30BQ9BXX2 1392 aa25.39■■□□□ 1.66
PDLIM7-207ENST00000486828 ADGRL2O95490 1459 aa25.39■■□□□ 1.65
PDLIM7-207ENST00000486828 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
PDLIM7-207ENST00000486828 ATP10BO94823 1461 aa25.37■■□□□ 1.65
PDLIM7-207ENST00000486828 RPRD2Q5VT52 1461 aaKnown RBP25.37■■□□□ 1.65
PDLIM7-207ENST00000486828 CCER2I3L3R5 266 aa25.37■■□□□ 1.65
PDLIM7-207ENST00000486828 ANP32CO43423 234 aa25.37■■□□□ 1.65
PDLIM7-207ENST00000486828 FOXD1Q16676 465 aa25.35■■□□□ 1.65
PDLIM7-207ENST00000486828 ABCC10Q5T3U5 1492 aa25.35■■□□□ 1.65
PDLIM7-207ENST00000486828 PLEKHD1A6NEE1 506 aa25.34■■□□□ 1.65
PDLIM7-207ENST00000486828 CDC42BPAQ5VT25 1732 aa25.33■■□□□ 1.65
PDLIM7-207ENST00000486828 L3MBTL2Q969R5 705 aa25.33■■□□□ 1.65
PDLIM7-207ENST00000486828 SLC4A1APQ9BWU0 796 aaKnown RBP25.31■■□□□ 1.64
PDLIM7-207ENST00000486828 PZPP20742 1482 aa25.31■■□□□ 1.64
PDLIM7-207ENST00000486828 ZNF777Q9ULD5 760 aaPredicted RBP25.31■■□□□ 1.64
PDLIM7-207ENST00000486828 HSPA5P11021 654 aaKnown RBP25.29■■□□□ 1.64
PDLIM7-207ENST00000486828 TEX14Q8IWB6 1497 aa25.29■■□□□ 1.64
PDLIM7-207ENST00000486828 ANKRD30AQ9BXX3 1397 aa25.29■■□□□ 1.64
PDLIM7-207ENST00000486828 ABCC2Q92887 1545 aa25.27■■□□□ 1.64
PDLIM7-207ENST00000486828 SHANK2Q9UPX8 1470 aa25.27■■□□□ 1.64
PDLIM7-207ENST00000486828 EIF4G2P78344 907 aaKnown RBP eCLIP25.26■■□□□ 1.63
PDLIM7-207ENST00000486828 UHRF1BP1LA0JNW5 1464 aa25.25■■□□□ 1.63
PDLIM7-207ENST00000486828 SUPT16HQ9Y5B9 1047 aaKnown RBP25.22■■□□□ 1.63
PDLIM7-207ENST00000486828 WASHC2AQ641Q2 1341 aa25.21■■□□□ 1.63
PDLIM7-207ENST00000486828 KIAA1107Q9UPP5 1409 aa25.2■■□□□ 1.63
PDLIM7-207ENST00000486828 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.62
PDLIM7-207ENST00000486828 C9orf84Q5VXU9 1444 aa25.19■■□□□ 1.62
PDLIM7-207ENST00000486828 NBPF8Q3BBV2 869 aa25.17■■□□□ 1.62
PDLIM7-207ENST00000486828 ARHGEF5Q12774 1597 aa25.16■■□□□ 1.62
PDLIM7-207ENST00000486828 PREX2Q70Z35 1606 aa25.12■■□□□ 1.61
PDLIM7-207ENST00000486828 MBD5Q9P267 1494 aa25.12■■□□□ 1.61
PDLIM7-207ENST00000486828 KDM5DQ9BY66 1539 aa25.11■■□□□ 1.61
PDLIM7-207ENST00000486828 CNTLNQ9NXG0 1405 aa25.11■■□□□ 1.61
PDLIM7-207ENST00000486828 TSPY4P0CV99 314 aa25.1■■□□□ 1.61
PDLIM7-207ENST00000486828 TSPY10P0CW01 314 aa25.1■■□□□ 1.61
PDLIM7-207ENST00000486828 PKD2Q13563 968 aa25.1■■□□□ 1.61
PDLIM7-207ENST00000486828 ZCCHC11Q5TAX3 1644 aaKnown RBP25.1■■□□□ 1.61
PDLIM7-207ENST00000486828 SPATA31E1Q6ZUB1 1445 aa25.09■■□□□ 1.61
PDLIM7-207ENST00000486828 CCDC7Q96M83 1385 aa25.09■■□□□ 1.61
PDLIM7-207ENST00000486828 CDC42BPBQ9Y5S2 1711 aa25.08■■□□□ 1.61
PDLIM7-207ENST00000486828 SAMD9LQ8IVG5 1584 aa25.08■■□□□ 1.61
PDLIM7-207ENST00000486828 CCDC141Q6ZP82 1450 aa25.06■■□□□ 1.6
PDLIM7-207ENST00000486828 NPM1P06748 294 aaKnown RBP eCLIP25.06■■□□□ 1.6
PDLIM7-207ENST00000486828 POLR1AO95602 1720 aaPredicted RBP25.06■■□□□ 1.6
PDLIM7-207ENST00000486828 NUP155O75694 1391 aa25.05■■□□□ 1.6
PDLIM7-207ENST00000486828 HNRNPMP52272 730 aaKnown RBP eCLIP25.05■■□□□ 1.61e-7■■■□□ 16.6
PDLIM7-207ENST00000486828 KIF15Q9NS87 1388 aa25.05■■□□□ 1.6
PDLIM7-207ENST00000486828 C11orf95C9JLR9 678 aaPredicted RBP25.04■■□□□ 1.6
PDLIM7-207ENST00000486828 RSPH4AQ5TD94 716 aa25.02■■□□□ 1.6
PDLIM7-207ENST00000486828 TTC37Q6PGP7 1564 aa24.99■■□□□ 1.59
PDLIM7-207ENST00000486828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.98■■□□□ 1.592e-7■■□□□ 13
PDLIM7-207ENST00000486828 MAST1Q9Y2H9 1570 aa24.96■■□□□ 1.59
PDLIM7-207ENST00000486828 KIF7Q2M1P5 1343 aa24.96■■□□□ 1.59
PDLIM7-207ENST00000486828 ARHGEF12Q9NZN5 1544 aa24.96■■□□□ 1.59
PDLIM7-207ENST00000486828 UHRF1BP1Q6BDS2 1440 aa24.96■■□□□ 1.59
PDLIM7-207ENST00000486828 ASXL2Q76L83 1435 aa24.96■■□□□ 1.59
PDLIM7-207ENST00000486828 ARHGAP5Q13017 1502 aa24.95■■□□□ 1.58
PDLIM7-207ENST00000486828 SYCP2Q9BX26 1530 aa24.95■■□□□ 1.58
PDLIM7-207ENST00000486828 WDR7Q9Y4E6 1490 aa24.93■■□□□ 1.58
PDLIM7-207ENST00000486828 MYO5CQ9NQX4 1742 aa24.92■■□□□ 1.58
PDLIM7-207ENST00000486828 USP47Q96K76 1375 aa24.9■■□□□ 1.58
PDLIM7-207ENST00000486828 KDM5CP41229 1560 aa24.9■■□□□ 1.58
PDLIM7-207ENST00000486828 RALGAPBQ86X10 1494 aa24.9■■□□□ 1.58
PDLIM7-207ENST00000486828 PRKRIP1Q9H875 184 aaPredicted RBP24.9■■□□□ 1.58
PDLIM7-207ENST00000486828 FAM135AQ9P2D6 1515 aa24.9■■□□□ 1.58
PDLIM7-207ENST00000486828 PLEKHH2Q8IVE3 1493 aa24.89■■□□□ 1.58
PDLIM7-207ENST00000486828 FKBP8Q14318 412 aa24.87■■□□□ 1.57
PDLIM7-207ENST00000486828 UNC13BO14795 1591 aa24.87■■□□□ 1.57
PDLIM7-207ENST00000486828 ZNF326Q5BKZ1 582 aaKnown RBP24.86■■□□□ 1.57
PDLIM7-207ENST00000486828 PLXNC1O60486 1568 aa24.86■■□□□ 1.57
PDLIM7-207ENST00000486828 BCORL1Q5H9F3 1711 aa24.85■■□□□ 1.57
PDLIM7-207ENST00000486828 HNRNPUQ00839 825 aaKnown RBP eCLIP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms