RNA–Protein interactions for RNA: ENST00000486762.6

CUEDC2-204, Transcript of CUE domain containing 2, humanhuman

TSL 3

Gene CUEDC2, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-204ENST00000486762 PREX1Q8TCU6 1659 aa18.84■□□□□ 0.61
CUEDC2-204ENST00000486762 RAPGEF6Q8TEU7 1601 aa18.83■□□□□ 0.61
CUEDC2-204ENST00000486762 SIGLEC1Q9BZZ2 1709 aa18.83■□□□□ 0.6
CUEDC2-204ENST00000486762 CFAP74Q9C0B2 1584 aa18.82■□□□□ 0.6
CUEDC2-204ENST00000486762 UHRF1BP1Q6BDS2 1440 aa18.82■□□□□ 0.6
CUEDC2-204ENST00000486762 RANGAP1P46060 587 aaPredicted RBP18.81■□□□□ 0.6
CUEDC2-204ENST00000486762 PTPRTO14522 1441 aa18.81■□□□□ 0.6
CUEDC2-204ENST00000486762 ARHGEF12Q9NZN5 1544 aa18.8■□□□□ 0.6
CUEDC2-204ENST00000486762 STRCQ7RTU9 1775 aa18.8■□□□□ 0.6
CUEDC2-204ENST00000486762 NUP153P49790 1475 aaKnown RBP18.79■□□□□ 0.6
CUEDC2-204ENST00000486762 HECW1Q76N89 1606 aa18.78■□□□□ 0.6
CUEDC2-204ENST00000486762 ATP10AO60312 1499 aa18.77■□□□□ 0.6
CUEDC2-204ENST00000486762 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.59
CUEDC2-204ENST00000486762 C9orf84Q5VXU9 1444 aa18.75■□□□□ 0.59
CUEDC2-204ENST00000486762 SCAPERQ9BY12 1400 aa18.75■□□□□ 0.59
CUEDC2-204ENST00000486762 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.74■□□□□ 0.59
CUEDC2-204ENST00000486762 UBTFP17480 764 aaKnown RBP18.73■□□□□ 0.59
CUEDC2-204ENST00000486762 LTBP4Q8N2S1 1624 aa18.73■□□□□ 0.59
CUEDC2-204ENST00000486762 SETD1BQ9UPS6 1966 aaKnown RBP18.69■□□□□ 0.58
CUEDC2-204ENST00000486762 UBAP1LF5GYI3 381 aa18.67■□□□□ 0.58
CUEDC2-204ENST00000486762 PLCH2O75038 1416 aa18.66■□□□□ 0.58
CUEDC2-204ENST00000486762 EHMT2Q96KQ7 1210 aa18.66■□□□□ 0.58
CUEDC2-204ENST00000486762 EFCAB2Q5VUJ9 269 aa18.64■□□□□ 0.57
CUEDC2-204ENST00000486762 ESF1Q9H501 851 aaKnown RBP18.64■□□□□ 0.57
CUEDC2-204ENST00000486762 NCOA1Q15788 1441 aa18.63■□□□□ 0.57
CUEDC2-204ENST00000486762 MYT1LQ9UL68 1186 aa18.62■□□□□ 0.57
CUEDC2-204ENST00000486762 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
CUEDC2-204ENST00000486762 TRAPPC8Q9Y2L5 1435 aa18.62■□□□□ 0.57
CUEDC2-204ENST00000486762 ARHGAP35Q9NRY4 1499 aa18.61■□□□□ 0.57
CUEDC2-204ENST00000486762 ZNF518AQ6AHZ1 1483 aa18.58■□□□□ 0.57
CUEDC2-204ENST00000486762 ZNF335Q9H4Z2 1342 aaPredicted RBP18.57■□□□□ 0.56
CUEDC2-204ENST00000486762 AFAP1Q8N556 730 aa18.57■□□□□ 0.56
CUEDC2-204ENST00000486762 C3P01024 1663 aa18.55■□□□□ 0.56
CUEDC2-204ENST00000486762 ATP1B4Q9UN42 357 aaPredicted RBP18.54■□□□□ 0.56
CUEDC2-204ENST00000486762 CDK11AQ9UQ88 783 aaPredicted RBP18.54■□□□□ 0.56
CUEDC2-204ENST00000486762 CDK13Q14004 1512 aaKnown RBP18.54■□□□□ 0.56
CUEDC2-204ENST00000486762 NCKAP5LQ9HCH0 1330 aa18.52■□□□□ 0.56
CUEDC2-204ENST00000486762 CAMSAP1Q5T5Y3 1602 aa18.52■□□□□ 0.55
CUEDC2-204ENST00000486762 REREQ9P2R6 1566 aa18.51■□□□□ 0.55
CUEDC2-204ENST00000486762 KDM5CP41229 1560 aa18.51■□□□□ 0.55
CUEDC2-204ENST00000486762 DIP2CQ9Y2E4 1556 aa18.51■□□□□ 0.55
CUEDC2-204ENST00000486762 CNTLNQ9NXG0 1405 aa18.5■□□□□ 0.55
CUEDC2-204ENST00000486762 HSPA1LP34931 641 aa18.5■□□□□ 0.55
CUEDC2-204ENST00000486762 MED1Q15648 1581 aaPredicted RBP18.5■□□□□ 0.55
CUEDC2-204ENST00000486762 AGLP35573 1532 aa18.49■□□□□ 0.55
CUEDC2-204ENST00000486762 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
CUEDC2-204ENST00000486762 PKD2Q13563 968 aa18.48■□□□□ 0.55
CUEDC2-204ENST00000486762 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
CUEDC2-204ENST00000486762 NPATQ14207 1427 aa18.47■□□□□ 0.55
CUEDC2-204ENST00000486762 MLH3Q9UHC1 1453 aa18.46■□□□□ 0.55
CUEDC2-204ENST00000486762 MYO5CQ9NQX4 1742 aa18.46■□□□□ 0.55
CUEDC2-204ENST00000486762 ARHGAP5Q13017 1502 aa18.46■□□□□ 0.55
CUEDC2-204ENST00000486762 PIP4K2BP78356 416 aa18.45■□□□□ 0.54
CUEDC2-204ENST00000486762 TROQ12816 1431 aaPredicted RBP18.44■□□□□ 0.54
CUEDC2-204ENST00000486762 CASKIN1Q8WXD9 1431 aa18.43■□□□□ 0.54
CUEDC2-204ENST00000486762 ABCA6Q8N139 1617 aa18.43■□□□□ 0.54
CUEDC2-204ENST00000486762 TOM1O60784 492 aa18.43■□□□□ 0.54
CUEDC2-204ENST00000486762 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
CUEDC2-204ENST00000486762 ZMYM3Q14202 1370 aa18.42■□□□□ 0.54
CUEDC2-204ENST00000486762 PLA2R1Q13018 1463 aa18.41■□□□□ 0.54
CUEDC2-204ENST00000486762 CLIP1P30622 1438 aa18.4■□□□□ 0.54
CUEDC2-204ENST00000486762 TCOF1Q13428 1488 aaKnown RBP18.38■□□□□ 0.53
CUEDC2-204ENST00000486762 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
CUEDC2-204ENST00000486762 KIF14Q15058 1648 aa18.38■□□□□ 0.53
CUEDC2-204ENST00000486762 LRRIQ1Q96JM4 1722 aa18.34■□□□□ 0.53
CUEDC2-204ENST00000486762 MROH2AA6NES4 1674 aa18.34■□□□□ 0.53
CUEDC2-204ENST00000486762 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.53
CUEDC2-204ENST00000486762 CEP170BQ9Y4F5 1589 aaPredicted RBP18.31■□□□□ 0.52
CUEDC2-204ENST00000486762 CPS1P31327 1500 aa18.3■□□□□ 0.52
CUEDC2-204ENST00000486762 ABCC1P33527 1531 aa18.3■□□□□ 0.52
CUEDC2-204ENST00000486762 ZNF142P52746 1687 aaPredicted RBP18.3■□□□□ 0.52
CUEDC2-204ENST00000486762 MYO3AQ8NEV4 1616 aa18.3■□□□□ 0.52
CUEDC2-204ENST00000486762 PTPRKQ15262 1439 aa18.29■□□□□ 0.52
CUEDC2-204ENST00000486762 KIDINS220Q9ULH0 1771 aa18.29■□□□□ 0.52
CUEDC2-204ENST00000486762 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
CUEDC2-204ENST00000486762 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
CUEDC2-204ENST00000486762 SUPT6HQ7KZ85 1726 aaKnown RBP18.25■□□□□ 0.51
CUEDC2-204ENST00000486762 ITSN2Q9NZM3 1697 aa18.25■□□□□ 0.51
CUEDC2-204ENST00000486762 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
CUEDC2-204ENST00000486762 GGT6Q6P531 493 aa18.24■□□□□ 0.51
CUEDC2-204ENST00000486762 A2ML1A8K2U0 1454 aa18.23■□□□□ 0.51
CUEDC2-204ENST00000486762 PREX2Q70Z35 1606 aa18.23■□□□□ 0.51
CUEDC2-204ENST00000486762 CLTCQ00610 1675 aaKnown RBP18.22■□□□□ 0.51
CUEDC2-204ENST00000486762 SENP3Q9H4L4 574 aaPredicted RBP18.22■□□□□ 0.51
CUEDC2-204ENST00000486762 ZNF777Q9ULD5 760 aaPredicted RBP18.21■□□□□ 0.51
CUEDC2-204ENST00000486762 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
CUEDC2-204ENST00000486762 GPATCH8Q9UKJ3 1502 aaKnown RBP18.18■□□□□ 0.5
CUEDC2-204ENST00000486762 CEP162Q5TB80 1403 aa18.18■□□□□ 0.5
CUEDC2-204ENST00000486762 DNMT1P26358 1616 aaKnown RBP18.18■□□□□ 0.5
CUEDC2-204ENST00000486762 ANKLE2Q86XL3 938 aa18.17■□□□□ 0.5
CUEDC2-204ENST00000486762 RGS17Q9UGC6 210 aaPredicted RBP18.17■□□□□ 0.5
CUEDC2-204ENST00000486762 A2MP01023 1474 aa18.17■□□□□ 0.5
CUEDC2-204ENST00000486762 HNRNPMP52272 730 aaKnown RBP eCLIP18.16■□□□□ 0.5
CUEDC2-204ENST00000486762 MTUS2Q5JR59 1369 aa18.16■□□□□ 0.5
CUEDC2-204ENST00000486762 CDC42BPAQ5VT25 1732 aa18.15■□□□□ 0.5
CUEDC2-204ENST00000486762 CFDP1Q9UEE9 299 aaPredicted RBP18.15■□□□□ 0.5
CUEDC2-204ENST00000486762 NEURL4Q96JN8 1562 aa18.15■□□□□ 0.5
CUEDC2-204ENST00000486762 ALKQ9UM73 1620 aa18.15■□□□□ 0.5
CUEDC2-204ENST00000486762 PLXNC1O60486 1568 aa18.14■□□□□ 0.49
CUEDC2-204ENST00000486762 CCNB3Q8WWL7 1395 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms