RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 TTC37Q6PGP7 1564 aa15.66■□□□□ 0.1
CCDC142-208ENST00000486335 SCAPERQ9BY12 1400 aa15.65■□□□□ 0.1
CCDC142-208ENST00000486335 PLCH2O75038 1416 aa15.63■□□□□ 0.09
CCDC142-208ENST00000486335 STRCQ7RTU9 1775 aa15.63■□□□□ 0.09
CCDC142-208ENST00000486335 ATP10AO60312 1499 aa15.63■□□□□ 0.09
CCDC142-208ENST00000486335 EFCAB5A4FU69 1503 aa15.63■□□□□ 0.09
CCDC142-208ENST00000486335 FER1L4A9Z1Z3 1794 aa15.59■□□□□ 0.09
CCDC142-208ENST00000486335 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.09
CCDC142-208ENST00000486335 AFAP1Q8N556 730 aa15.58■□□□□ 0.08
CCDC142-208ENST00000486335 C9orf84Q5VXU9 1444 aa15.57■□□□□ 0.08
CCDC142-208ENST00000486335 CFAP74Q9C0B2 1584 aa15.57■□□□□ 0.08
CCDC142-208ENST00000486335 DMRT2Q9Y5R5 561 aa15.56■□□□□ 0.08
CCDC142-208ENST00000486335 LTBP4Q8N2S1 1624 aa15.54■□□□□ 0.08
CCDC142-208ENST00000486335 PTPRTO14522 1441 aa15.54■□□□□ 0.08
CCDC142-208ENST00000486335 EFCAB2Q5VUJ9 269 aa15.54■□□□□ 0.08
CCDC142-208ENST00000486335 PREX1Q8TCU6 1659 aa15.54■□□□□ 0.08
CCDC142-208ENST00000486335 SETD1BQ9UPS6 1966 aaKnown RBP15.52■□□□□ 0.07
CCDC142-208ENST00000486335 UHRF1BP1Q6BDS2 1440 aa15.51■□□□□ 0.07
CCDC142-208ENST00000486335 KDM5CP41229 1560 aa15.48■□□□□ 0.07
CCDC142-208ENST00000486335 SPATA31D1Q6ZQQ2 1576 aa15.46■□□□□ 0.07
CCDC142-208ENST00000486335 ZNF518AQ6AHZ1 1483 aa15.46■□□□□ 0.06
CCDC142-208ENST00000486335 DIP2CQ9Y2E4 1556 aa15.45■□□□□ 0.06
CCDC142-208ENST00000486335 NCOA1Q15788 1441 aa15.45■□□□□ 0.06
CCDC142-208ENST00000486335 TRAPPC8Q9Y2L5 1435 aa15.45■□□□□ 0.06
CCDC142-208ENST00000486335 KIF14Q15058 1648 aa15.45■□□□□ 0.06
CCDC142-208ENST00000486335 MLH3Q9UHC1 1453 aa15.44■□□□□ 0.06
CCDC142-208ENST00000486335 EEA1Q15075 1411 aa15.43■□□□□ 0.06
CCDC142-208ENST00000486335 REREQ9P2R6 1566 aa15.43■□□□□ 0.06
CCDC142-208ENST00000486335 C3P01024 1663 aa15.42■□□□□ 0.06
CCDC142-208ENST00000486335 AGLP35573 1532 aa15.42■□□□□ 0.06
CCDC142-208ENST00000486335 TROQ12816 1431 aaPredicted RBP15.42■□□□□ 0.06
CCDC142-208ENST00000486335 IQSEC2Q5JU85 1478 aa15.41■□□□□ 0.06
CCDC142-208ENST00000486335 ATP1B4Q9UN42 357 aaPredicted RBP15.41■□□□□ 0.06
CCDC142-208ENST00000486335 NCKAP5LQ9HCH0 1330 aa15.41■□□□□ 0.06
CCDC142-208ENST00000486335 ARHGAP35Q9NRY4 1499 aa15.4■□□□□ 0.06
CCDC142-208ENST00000486335 ABCA6Q8N139 1617 aa15.4■□□□□ 0.06
CCDC142-208ENST00000486335 ZNF335Q9H4Z2 1342 aaPredicted RBP15.4■□□□□ 0.06
CCDC142-208ENST00000486335 MYO5CQ9NQX4 1742 aa15.39■□□□□ 0.05
CCDC142-208ENST00000486335 ARHGAP5Q13017 1502 aa15.38■□□□□ 0.05
CCDC142-208ENST00000486335 CDK11AQ9UQ88 783 aaPredicted RBP15.37■□□□□ 0.05
CCDC142-208ENST00000486335 FMN1Q68DA7 1419 aa15.36■□□□□ 0.05
CCDC142-208ENST00000486335 MYT1LQ9UL68 1186 aa15.36■□□□□ 0.05
CCDC142-208ENST00000486335 ZMYM3Q14202 1370 aa15.36■□□□□ 0.05
CCDC142-208ENST00000486335 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
CCDC142-208ENST00000486335 CDC42BPBQ9Y5S2 1711 aa15.34■□□□□ 0.05
CCDC142-208ENST00000486335 CAMSAP1Q5T5Y3 1602 aa15.34■□□□□ 0.05
CCDC142-208ENST00000486335 UBAP1LF5GYI3 381 aa15.33■□□□□ 0.04
CCDC142-208ENST00000486335 KIDINS220Q9ULH0 1771 aa15.33■□□□□ 0.04
CCDC142-208ENST00000486335 NPATQ14207 1427 aa15.33■□□□□ 0.04
CCDC142-208ENST00000486335 ABCC1P33527 1531 aa15.33■□□□□ 0.04
CCDC142-208ENST00000486335 LRRIQ1Q96JM4 1722 aa15.32■□□□□ 0.04
CCDC142-208ENST00000486335 CNTLNQ9NXG0 1405 aa15.32■□□□□ 0.04
CCDC142-208ENST00000486335 UBTFP17480 764 aaKnown RBP15.3■□□□□ 0.04
CCDC142-208ENST00000486335 ESF1Q9H501 851 aaKnown RBP15.3■□□□□ 0.04
CCDC142-208ENST00000486335 TCOF1Q13428 1488 aaKnown RBP15.29■□□□□ 0.04
CCDC142-208ENST00000486335 PTPRKQ15262 1439 aa15.28■□□□□ 0.04
CCDC142-208ENST00000486335 PKD2Q13563 968 aa15.28■□□□□ 0.04
CCDC142-208ENST00000486335 CLIP1P30622 1438 aa15.27■□□□□ 0.04
CCDC142-208ENST00000486335 HSPA1LP34931 641 aa15.27■□□□□ 0.04
CCDC142-208ENST00000486335 HNRNPMP52272 730 aaKnown RBP eCLIP15.27■□□□□ 0.04
CCDC142-208ENST00000486335 SAMD9LQ8IVG5 1584 aa15.26■□□□□ 0.03
CCDC142-208ENST00000486335 ITSN2Q9NZM3 1697 aa15.25■□□□□ 0.03
CCDC142-208ENST00000486335 PREX2Q70Z35 1606 aa15.25■□□□□ 0.03
CCDC142-208ENST00000486335 PLA2R1Q13018 1463 aa15.25■□□□□ 0.03
CCDC142-208ENST00000486335 MROH2AA6NES4 1674 aa15.22■□□□□ 0.03
CCDC142-208ENST00000486335 SPAG9O60271 1321 aaKnown RBP15.22■□□□□ 0.03
CCDC142-208ENST00000486335 GPATCH8Q9UKJ3 1502 aaKnown RBP15.22■□□□□ 0.03
CCDC142-208ENST00000486335 CASKIN1Q8WXD9 1431 aa15.21■□□□□ 0.03
CCDC142-208ENST00000486335 ZNF777Q9ULD5 760 aaPredicted RBP15.21■□□□□ 0.03
CCDC142-208ENST00000486335 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.03
CCDC142-208ENST00000486335 GGT6Q6P531 493 aa15.2■□□□□ 0.02
CCDC142-208ENST00000486335 CDC42BPAQ5VT25 1732 aa15.2■□□□□ 0.02
CCDC142-208ENST00000486335 PLXNC1O60486 1568 aa15.19■□□□□ 0.02
CCDC142-208ENST00000486335 CEP170BQ9Y4F5 1589 aaPredicted RBP15.19■□□□□ 0.02
CCDC142-208ENST00000486335 ZNF142P52746 1687 aaPredicted RBP15.19■□□□□ 0.02
CCDC142-208ENST00000486335 SYCP2Q9BX26 1530 aa15.18■□□□□ 0.02
CCDC142-208ENST00000486335 ALKQ9UM73 1620 aa15.18■□□□□ 0.02
CCDC142-208ENST00000486335 A2MP01023 1474 aa15.18■□□□□ 0.02
CCDC142-208ENST00000486335 MED1Q15648 1581 aaPredicted RBP15.18■□□□□ 0.02
CCDC142-208ENST00000486335 KIAA1107Q9UPP5 1409 aa15.17■□□□□ 0.02
CCDC142-208ENST00000486335 MYO3AQ8NEV4 1616 aa15.17■□□□□ 0.02
CCDC142-208ENST00000486335 CLTCQ00610 1675 aaKnown RBP15.17■□□□□ 0.02
CCDC142-208ENST00000486335 PIP4K2BP78356 416 aa15.17■□□□□ 0.02
CCDC142-208ENST00000486335 FBXO31Q5XUX0 539 aaPredicted RBP15.17■□□□□ 0.02
CCDC142-208ENST00000486335 SUPT6HQ7KZ85 1726 aaKnown RBP15.17■□□□□ 0.02
CCDC142-208ENST00000486335 ZNF644Q9H582 1327 aaPredicted RBP15.16■□□□□ 0.02
CCDC142-208ENST00000486335 A2ML1A8K2U0 1454 aa15.14■□□□□ 0.01
CCDC142-208ENST00000486335 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
CCDC142-208ENST00000486335 DNMT1P26358 1616 aaKnown RBP15.14■□□□□ 0.01
CCDC142-208ENST00000486335 ATP7AQ04656 1500 aa15.14■□□□□ 0.01
CCDC142-208ENST00000486335 NEURL4Q96JN8 1562 aa15.14■□□□□ 0.01
CCDC142-208ENST00000486335 INO80Q9ULG1 1556 aaPredicted RBP15.13■□□□□ 0.01
CCDC142-208ENST00000486335 SHANK2Q9UPX8 1470 aa15.13■□□□□ 0.01
CCDC142-208ENST00000486335 TOM1O60784 492 aa15.12■□□□□ 0.01
CCDC142-208ENST00000486335 CFDP1Q9UEE9 299 aaPredicted RBP15.12■□□□□ 0.01
CCDC142-208ENST00000486335 RGS17Q9UGC6 210 aaPredicted RBP15.11■□□□□ 0.01
CCDC142-208ENST00000486335 MBD5Q9P267 1494 aa15.11■□□□□ 0.01
CCDC142-208ENST00000486335 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
CCDC142-208ENST00000486335 VWDEQ8N2E2 1590 aa15.1■□□□□ 0.01
CCDC142-208ENST00000486335 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms