RNA–Protein interactions for RNA: ENST00000485835.1

PSMD3-203, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 2,888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-203ENST00000485835 CCDC7Q96M83 1385 aa13.96□□□□□ -0.17
PSMD3-203ENST00000485835 EXOC6Q8TAG9 804 aa13.96□□□□□ -0.17
PSMD3-203ENST00000485835 PDIA4P13667 645 aaKnown RBP13.96□□□□□ -0.18
PSMD3-203ENST00000485835 CFAP43Q8NDM7 1665 aa13.94□□□□□ -0.18
PSMD3-203ENST00000485835 ARHGAP35Q9NRY4 1499 aa13.93□□□□□ -0.18
PSMD3-203ENST00000485835 VIRMAQ69YN4 1812 aaKnown RBP13.93□□□□□ -0.18
PSMD3-203ENST00000485835 PHLDB1Q86UU1 1377 aa13.92□□□□□ -0.18
PSMD3-203ENST00000485835 LRRC9Q6ZRR7 1453 aa13.92□□□□□ -0.18
PSMD3-203ENST00000485835 RGS3P49796 1198 aa13.92□□□□□ -0.18
PSMD3-203ENST00000485835 UACAQ9BZF9 1416 aa13.91□□□□□ -0.18
PSMD3-203ENST00000485835 CCDC18Q5T9S5 1454 aa13.9□□□□□ -0.18
PSMD3-203ENST00000485835 BCL11BQ9C0K0 894 aaPredicted RBP13.9□□□□□ -0.18
PSMD3-203ENST00000485835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.19
PSMD3-203ENST00000485835 FSD2A1L4K1 749 aa13.89□□□□□ -0.19
PSMD3-203ENST00000485835 XRCC6P12956 609 aaKnown RBP eCLIP13.89□□□□□ -0.19
PSMD3-203ENST00000485835 EIF4G2P78344 907 aaKnown RBP eCLIP13.89□□□□□ -0.19
PSMD3-203ENST00000485835 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
PSMD3-203ENST00000485835 PTPN23Q9H3S7 1636 aa13.86□□□□□ -0.19
PSMD3-203ENST00000485835 GOLGA6L3A6NEY3 463 aa13.85□□□□□ -0.19
PSMD3-203ENST00000485835 BIVM-ERCC5R4GMW8 1640 aa13.85□□□□□ -0.19
PSMD3-203ENST00000485835 FAM50AQ14320 339 aaKnown RBP13.84□□□□□ -0.19
PSMD3-203ENST00000485835 FAM161AQ3B820 660 aa13.84□□□□□ -0.19
PSMD3-203ENST00000485835 ESPNB1AK53 854 aa13.83□□□□□ -0.2
PSMD3-203ENST00000485835 C8orf34Q49A92 452 aa13.83□□□□□ -0.2
PSMD3-203ENST00000485835 SMAP1Q8IYB5 467 aaPredicted RBP13.83□□□□□ -0.2
PSMD3-203ENST00000485835 RCAN3Q9UKA8 241 aa13.83□□□□□ -0.2
PSMD3-203ENST00000485835 KTN1Q86UP2 1357 aaKnown RBP13.83□□□□□ -0.2
PSMD3-203ENST00000485835 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
PSMD3-203ENST00000485835 MAP7D2Q96T17 732 aa13.82□□□□□ -0.2
PSMD3-203ENST00000485835 DHX29Q7Z478 1369 aaKnown RBP13.82□□□□□ -0.2
PSMD3-203ENST00000485835 MYOM3Q5VTT5 1437 aa13.82□□□□□ -0.2
PSMD3-203ENST00000485835 PANK2Q9BZ23 570 aa13.81□□□□□ -0.2
PSMD3-203ENST00000485835 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
PSMD3-203ENST00000485835 ERBB4Q15303 1308 aa13.8□□□□□ -0.2
PSMD3-203ENST00000485835 LRPPRCP42704 1394 aaKnown RBP13.8□□□□□ -0.2
PSMD3-203ENST00000485835 SKAP1Q86WV1 359 aa13.8□□□□□ -0.2
PSMD3-203ENST00000485835 KDM2BQ8NHM5 1336 aa13.8□□□□□ -0.2
PSMD3-203ENST00000485835 HECW1Q76N89 1606 aa13.79□□□□□ -0.2
PSMD3-203ENST00000485835 KIF7Q2M1P5 1343 aa13.78□□□□□ -0.2
PSMD3-203ENST00000485835 PNISRQ8TF01 805 aaKnown RBP13.78□□□□□ -0.2
PSMD3-203ENST00000485835 MRE11P49959 708 aa13.77□□□□□ -0.2
PSMD3-203ENST00000485835 TAF7LQ5H9L4 462 aa13.77□□□□□ -0.2
PSMD3-203ENST00000485835 GTF2E1P29083 439 aaPredicted RBP13.77□□□□□ -0.21
PSMD3-203ENST00000485835 TERF1P54274 439 aa13.77□□□□□ -0.21
PSMD3-203ENST00000485835 BBXQ8WY36 941 aaPredicted RBP13.76□□□□□ -0.21
PSMD3-203ENST00000485835 ARID4BQ4LE39 1312 aaPredicted RBP13.76□□□□□ -0.21
PSMD3-203ENST00000485835 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
PSMD3-203ENST00000485835 AQRO60306 1485 aaKnown RBP eCLIP13.75□□□□□ -0.217e-7■■□□□ 14.2
PSMD3-203ENST00000485835 UTP14CQ5TAP6 766 aaKnown RBP13.75□□□□□ -0.21
PSMD3-203ENST00000485835 KIAA1211Q6ZU35 1233 aa13.75□□□□□ -0.21
PSMD3-203ENST00000485835 NAP1L2Q9ULW6 460 aaPredicted RBP13.74□□□□□ -0.21
PSMD3-203ENST00000485835 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
PSMD3-203ENST00000485835 ANTXR1Q9H6X2 564 aa13.73□□□□□ -0.21
PSMD3-203ENST00000485835 RIPK4P57078 832 aa13.73□□□□□ -0.21
PSMD3-203ENST00000485835 PDE3BQ13370 1112 aa13.73□□□□□ -0.21
PSMD3-203ENST00000485835 ISY1Q9ULR0 285 aaKnown RBP13.73□□□□□ -0.21
PSMD3-203ENST00000485835 STAC3Q96MF2 364 aa13.72□□□□□ -0.21
PSMD3-203ENST00000485835 CRBNQ96SW2 442 aa13.72□□□□□ -0.21
PSMD3-203ENST00000485835 MYH16Q9H6N6 1097 aa13.72□□□□□ -0.21
PSMD3-203ENST00000485835 BECN1Q14457 450 aa13.72□□□□□ -0.21
PSMD3-203ENST00000485835 PCF11O94913 1555 aaKnown RBP13.71□□□□□ -0.21
PSMD3-203ENST00000485835 NCLP19338 710 aaKnown RBP13.71□□□□□ -0.21
PSMD3-203ENST00000485835 ARXQ96QS3 562 aa13.71□□□□□ -0.21
PSMD3-203ENST00000485835 NAIPQ13075 1403 aa13.71□□□□□ -0.22
PSMD3-203ENST00000485835 CANXP27824 592 aaKnown RBP13.7□□□□□ -0.22
PSMD3-203ENST00000485835 FMN1Q68DA7 1419 aa13.7□□□□□ -0.22
PSMD3-203ENST00000485835 GRPEL1Q9HAV7 217 aa13.7□□□□□ -0.22
PSMD3-203ENST00000485835 USP19O94966 1318 aa13.7□□□□□ -0.22
PSMD3-203ENST00000485835 OFD1O75665 1012 aa13.69□□□□□ -0.22
PSMD3-203ENST00000485835 DMTNQ08495 405 aa13.69□□□□□ -0.22
PSMD3-203ENST00000485835 IPO4Q8TEX9 1081 aaKnown RBP13.69□□□□□ -0.22
PSMD3-203ENST00000485835 DENND4BO75064 1496 aaPredicted RBP13.69□□□□□ -0.22
PSMD3-203ENST00000485835 GCC2Q8IWJ2 1684 aa13.69□□□□□ -0.22
PSMD3-203ENST00000485835 MTERF4Q7Z6M4 381 aaKnown RBP13.69□□□□□ -0.22
PSMD3-203ENST00000485835 TRIM44Q96DX7 344 aaPredicted RBP13.68□□□□□ -0.22
PSMD3-203ENST00000485835 FGD6Q6ZV73 1430 aa13.68□□□□□ -0.22
PSMD3-203ENST00000485835 MIA2Q96PC5 1412 aa13.68□□□□□ -0.22
PSMD3-203ENST00000485835 NLRP1Q9C000 1473 aa13.67□□□□□ -0.22
PSMD3-203ENST00000485835 ZHX1Q9UKY1 873 aaPredicted RBP13.67□□□□□ -0.22
PSMD3-203ENST00000485835 BCORL1Q5H9F3 1711 aa13.67□□□□□ -0.22
PSMD3-203ENST00000485835 CUX1P39880 1505 aa13.67□□□□□ -0.22
PSMD3-203ENST00000485835 PTPRKQ15262 1439 aa13.67□□□□□ -0.22
PSMD3-203ENST00000485835 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.67□□□□□ -0.22
PSMD3-203ENST00000485835 BRD4O60885 1362 aaPredicted RBP13.67□□□□□ -0.22
PSMD3-203ENST00000485835 MCM4P33991 863 aa13.66□□□□□ -0.22
PSMD3-203ENST00000485835 SENP3-EIF4A1A0A087X0R7 540 aa13.66□□□□□ -0.22
PSMD3-203ENST00000485835 SLKQ9H2G2 1235 aaPredicted RBP13.66□□□□□ -0.22
PSMD3-203ENST00000485835 TMC1Q8TDI8 760 aa13.65□□□□□ -0.22
PSMD3-203ENST00000485835 CNGB1Q14028 1251 aaPredicted RBP13.65□□□□□ -0.22
PSMD3-203ENST00000485835 CHMP4BQ9H444 224 aaKnown RBP13.64□□□□□ -0.23
PSMD3-203ENST00000485835 PLIN1O60240 522 aa13.63□□□□□ -0.23
PSMD3-203ENST00000485835 GZF1Q9H116 711 aaPredicted RBP13.63□□□□□ -0.23
PSMD3-203ENST00000485835 TEX14Q8IWB6 1497 aa13.63□□□□□ -0.23
PSMD3-203ENST00000485835 CTTNBP2Q8WZ74 1663 aa13.62□□□□□ -0.23
PSMD3-203ENST00000485835 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
PSMD3-203ENST00000485835 TRAK2O60296 914 aa13.62□□□□□ -0.23
PSMD3-203ENST00000485835 FAM13BQ9NYF5 915 aa13.62□□□□□ -0.23
PSMD3-203ENST00000485835 KIF27Q86VH2 1401 aa13.61□□□□□ -0.23
PSMD3-203ENST00000485835 L3MBTL2Q969R5 705 aa13.61□□□□□ -0.23
PSMD3-203ENST00000485835 ZNF326Q5BKZ1 582 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms