RNA–Protein interactions for RNA: ENST00000485252.6

RAP1B-211, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 5

Gene RAP1B, Length 312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-211ENST00000485252 MAGI2Q86UL8 1455 aa27.95■■■□□ 2.07
RAP1B-211ENST00000485252 SETD1BQ9UPS6 1966 aaKnown RBP27.95■■■□□ 2.06
RAP1B-211ENST00000485252 NUP153P49790 1475 aaKnown RBP27.92■■■□□ 2.06
RAP1B-211ENST00000485252 PRXQ9BXM0 1461 aa27.92■■■□□ 2.06
RAP1B-211ENST00000485252 UHRF1BP1Q6BDS2 1440 aa27.92■■■□□ 2.06
RAP1B-211ENST00000485252 SAMD9Q5K651 1589 aa27.91■■■□□ 2.06
RAP1B-211ENST00000485252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.91■■■□□ 2.068e-7■■□□□ 12.8
RAP1B-211ENST00000485252 LTBP4Q8N2S1 1624 aa27.89■■■□□ 2.05
RAP1B-211ENST00000485252 PLEKHD1A6NEE1 506 aa27.88■■■□□ 2.05
RAP1B-211ENST00000485252 PTPRTO14522 1441 aa27.88■■■□□ 2.05
RAP1B-211ENST00000485252 ATP10AO60312 1499 aa27.84■■■□□ 2.05
RAP1B-211ENST00000485252 C9orf84Q5VXU9 1444 aa27.84■■■□□ 2.05
RAP1B-211ENST00000485252 IQSEC2Q5JU85 1478 aa27.83■■■□□ 2.04
RAP1B-211ENST00000485252 SCAPERQ9BY12 1400 aa27.82■■■□□ 2.04
RAP1B-211ENST00000485252 C3P01024 1663 aa27.75■■■□□ 2.03
RAP1B-211ENST00000485252 RANGAP1P46060 587 aaPredicted RBP27.72■■■□□ 2.03
RAP1B-211ENST00000485252 UBAP1LF5GYI3 381 aa27.69■■■□□ 2.02
RAP1B-211ENST00000485252 PLCH2O75038 1416 aa27.67■■■□□ 2.02
RAP1B-211ENST00000485252 NCOA1Q15788 1441 aa27.66■■■□□ 2.02
RAP1B-211ENST00000485252 MYO5CQ9NQX4 1742 aa27.64■■■□□ 2.01
RAP1B-211ENST00000485252 MYT1LQ9UL68 1186 aa27.62■■■□□ 2.01
RAP1B-211ENST00000485252 CDK13Q14004 1512 aaKnown RBP27.6■■■□□ 2.01
RAP1B-211ENST00000485252 TRAPPC8Q9Y2L5 1435 aa27.59■■■□□ 2.01
RAP1B-211ENST00000485252 MED1Q15648 1581 aaPredicted RBP27.58■■■□□ 2.01
RAP1B-211ENST00000485252 DIP2CQ9Y2E4 1556 aa27.58■■■□□ 2.01
RAP1B-211ENST00000485252 EFCAB2Q5VUJ9 269 aa27.58■■■□□ 2.01
RAP1B-211ENST00000485252 ESF1Q9H501 851 aaKnown RBP27.58■■■□□ 2.01
RAP1B-211ENST00000485252 CAMSAP1Q5T5Y3 1602 aa27.58■■■□□ 2.01
RAP1B-211ENST00000485252 ZNF335Q9H4Z2 1342 aaPredicted RBP27.58■■■□□ 2.01
RAP1B-211ENST00000485252 ZNF518AQ6AHZ1 1483 aa27.57■■■□□ 2
RAP1B-211ENST00000485252 KDM5CP41229 1560 aa27.54■■■□□ 2
RAP1B-211ENST00000485252 AFAP1Q8N556 730 aa27.54■■■□□ 2
RAP1B-211ENST00000485252 ABCA6Q8N139 1617 aa27.52■■■□□ 2
RAP1B-211ENST00000485252 REREQ9P2R6 1566 aa27.52■■■□□ 2
RAP1B-211ENST00000485252 NCKAP5LQ9HCH0 1330 aa27.51■■□□□ 1.99
RAP1B-211ENST00000485252 SCAF1Q9H7N4 1312 aaKnown RBP27.47■■□□□ 1.99
RAP1B-211ENST00000485252 SUPT6HQ7KZ85 1726 aaKnown RBP27.47■■□□□ 1.99
RAP1B-211ENST00000485252 HSPA1LP34931 641 aa27.46■■□□□ 1.99
RAP1B-211ENST00000485252 AGLP35573 1532 aa27.46■■□□□ 1.99
RAP1B-211ENST00000485252 ARHGAP5Q13017 1502 aa27.46■■□□□ 1.99
RAP1B-211ENST00000485252 KIF14Q15058 1648 aa27.45■■□□□ 1.98
RAP1B-211ENST00000485252 CSRNP3Q8WYN3 585 aa27.44■■□□□ 1.98
RAP1B-211ENST00000485252 CNTLNQ9NXG0 1405 aa27.41■■□□□ 1.98
RAP1B-211ENST00000485252 PIP4K2BP78356 416 aa27.4■■□□□ 1.98
RAP1B-211ENST00000485252 PHF23Q9BUL5 403 aaPredicted RBP27.39■■□□□ 1.98
RAP1B-211ENST00000485252 MLH3Q9UHC1 1453 aa27.38■■□□□ 1.97
RAP1B-211ENST00000485252 MROH2AA6NES4 1674 aa27.38■■□□□ 1.97
RAP1B-211ENST00000485252 ATP1B4Q9UN42 357 aaPredicted RBP27.38■■□□□ 1.97
RAP1B-211ENST00000485252 NPATQ14207 1427 aa27.37■■□□□ 1.97
RAP1B-211ENST00000485252 CDC42BPBQ9Y5S2 1711 aa27.34■■□□□ 1.97
RAP1B-211ENST00000485252 PKD2Q13563 968 aa27.34■■□□□ 1.97
RAP1B-211ENST00000485252 ZNF142P52746 1687 aaPredicted RBP27.33■■□□□ 1.97
RAP1B-211ENST00000485252 MYO3AQ8NEV4 1616 aa27.33■■□□□ 1.97
RAP1B-211ENST00000485252 KIDINS220Q9ULH0 1771 aa27.32■■□□□ 1.96
RAP1B-211ENST00000485252 PLA2R1Q13018 1463 aa27.32■■□□□ 1.96
RAP1B-211ENST00000485252 ZMYM3Q14202 1370 aa27.3■■□□□ 1.96
RAP1B-211ENST00000485252 ITSN2Q9NZM3 1697 aa27.3■■□□□ 1.96
RAP1B-211ENST00000485252 PPP6R1Q9UPN7 881 aa27.29■■□□□ 1.96
RAP1B-211ENST00000485252 CDK11AQ9UQ88 783 aaPredicted RBP27.29■■□□□ 1.96
RAP1B-211ENST00000485252 TCOF1Q13428 1488 aaKnown RBP27.29■■□□□ 1.96
RAP1B-211ENST00000485252 TOM1O60784 492 aa27.28■■□□□ 1.96
RAP1B-211ENST00000485252 CEP170BQ9Y4F5 1589 aaPredicted RBP27.27■■□□□ 1.96
RAP1B-211ENST00000485252 CLTCQ00610 1675 aaKnown RBP27.27■■□□□ 1.96
RAP1B-211ENST00000485252 ABCC1P33527 1531 aa27.25■■□□□ 1.95
RAP1B-211ENST00000485252 TROQ12816 1431 aaPredicted RBP27.24■■□□□ 1.95
RAP1B-211ENST00000485252 CLIP1P30622 1438 aa27.21■■□□□ 1.95
RAP1B-211ENST00000485252 PREX2Q70Z35 1606 aa27.2■■□□□ 1.95
RAP1B-211ENST00000485252 CPS1P31327 1500 aa27.17■■□□□ 1.94
RAP1B-211ENST00000485252 LRRIQ1Q96JM4 1722 aa27.17■■□□□ 1.94
RAP1B-211ENST00000485252 POLR1AO95602 1720 aaPredicted RBP27.16■■□□□ 1.94
RAP1B-211ENST00000485252 SENP3Q9H4L4 574 aaPredicted RBP27.15■■□□□ 1.94
RAP1B-211ENST00000485252 PTPRKQ15262 1439 aa27.15■■□□□ 1.94
RAP1B-211ENST00000485252 FMN1Q68DA7 1419 aa27.15■■□□□ 1.94
RAP1B-211ENST00000485252 SHANK2Q9UPX8 1470 aa27.12■■□□□ 1.93
RAP1B-211ENST00000485252 DNMT1P26358 1616 aaKnown RBP27.11■■□□□ 1.93
RAP1B-211ENST00000485252 SAMD9LQ8IVG5 1584 aa27.1■■□□□ 1.93
RAP1B-211ENST00000485252 ALKQ9UM73 1620 aa27.08■■□□□ 1.93
RAP1B-211ENST00000485252 CDC42BPAQ5VT25 1732 aa27.08■■□□□ 1.93
RAP1B-211ENST00000485252 NEURL4Q96JN8 1562 aa27.07■■□□□ 1.92
RAP1B-211ENST00000485252 EEA1Q15075 1411 aa27.07■■□□□ 1.92
RAP1B-211ENST00000485252 A2ML1A8K2U0 1454 aa27.06■■□□□ 1.92
RAP1B-211ENST00000485252 GGT6Q6P531 493 aa27.04■■□□□ 1.92
RAP1B-211ENST00000485252 SPAG9O60271 1321 aaKnown RBP27.02■■□□□ 1.92
RAP1B-211ENST00000485252 ZNF777Q9ULD5 760 aaPredicted RBP27.01■■□□□ 1.91
RAP1B-211ENST00000485252 ARHGAP35Q9NRY4 1499 aa27■■□□□ 1.91
RAP1B-211ENST00000485252 RGS17Q9UGC6 210 aaPredicted RBP27■■□□□ 1.91
RAP1B-211ENST00000485252 PLXNC1O60486 1568 aa27■■□□□ 1.91
RAP1B-211ENST00000485252 SYCP2Q9BX26 1530 aa27■■□□□ 1.91
RAP1B-211ENST00000485252 VWDEQ8N2E2 1590 aa26.99■■□□□ 1.91
RAP1B-211ENST00000485252 ATP7AQ04656 1500 aa26.99■■□□□ 1.91
RAP1B-211ENST00000485252 EHMT2Q96KQ7 1210 aa26.98■■□□□ 1.91
RAP1B-211ENST00000485252 A2MP01023 1474 aa26.98■■□□□ 1.91
RAP1B-211ENST00000485252 HNRNPMP52272 730 aaKnown RBP eCLIP26.95■■□□□ 1.9
RAP1B-211ENST00000485252 INO80Q9ULG1 1556 aaPredicted RBP26.92■■□□□ 1.9
RAP1B-211ENST00000485252 STRCP1A6NGW2 1772 aa26.91■■□□□ 1.9
RAP1B-211ENST00000485252 UBTFP17480 764 aaKnown RBP26.9■■□□□ 1.9
RAP1B-211ENST00000485252 ANKLE2Q86XL3 938 aa26.89■■□□□ 1.9
RAP1B-211ENST00000485252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.88■■□□□ 1.896e-8■□□□□ 11.2
RAP1B-211ENST00000485252 ADGBQ8N7X0 1667 aa26.88■■□□□ 1.89
RAP1B-211ENST00000485252 RNF17Q9BXT8 1623 aaKnown RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms