RNA–Protein interactions for RNA: ENST00000484922.1

SHROOM4-205, Transcript of shroom family member 4, humanhuman

TSL 5

Gene SHROOM4, Length 295 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-205ENST00000484922 CHD1O14646 1710 aa4.35□□□□□ -1.71
SHROOM4-205ENST00000484922 IFNL1Q8IU54 200 aa4.35□□□□□ -1.71
SHROOM4-205ENST00000484922 TDRD9Q8NDG6 1382 aaKnown RBP4.35□□□□□ -1.71
SHROOM4-205ENST00000484922 KIF27Q86VH2 1401 aa4.35□□□□□ -1.71
SHROOM4-205ENST00000484922 ERICH3Q5RHP9 1530 aa4.35□□□□□ -1.71
SHROOM4-205ENST00000484922 CHMP7Q8WUX9 453 aaPredicted RBP4.34□□□□□ -1.71
SHROOM4-205ENST00000484922 CUL7Q14999 1698 aa4.34□□□□□ -1.71
SHROOM4-205ENST00000484922 SYNJ2O15056 1496 aa4.33□□□□□ -1.72
SHROOM4-205ENST00000484922 SNAPC4Q5SXM2 1469 aa4.33□□□□□ -1.72
SHROOM4-205ENST00000484922 SGIP1Q9BQI5 828 aa4.32□□□□□ -1.72
SHROOM4-205ENST00000484922 TMEM106CQ9BVX2 250 aa4.32□□□□□ -1.72
SHROOM4-205ENST00000484922 ADAMTS12P58397 1594 aa4.31□□□□□ -1.72
SHROOM4-205ENST00000484922 FHAD1B1AJZ9 1412 aa4.31□□□□□ -1.72
SHROOM4-205ENST00000484922 FKBP8Q14318 412 aa4.31□□□□□ -1.72
SHROOM4-205ENST00000484922 DCAF8Q5TAQ9 597 aa4.31□□□□□ -1.72
SHROOM4-205ENST00000484922 CDAN1Q8IWY9 1227 aa4.31□□□□□ -1.72
SHROOM4-205ENST00000484922 SLAIN1Q8ND83 568 aa4.31□□□□□ -1.72
SHROOM4-205ENST00000484922 DNAJC5Q9H3Z4 198 aa4.31□□□□□ -1.72
SHROOM4-205ENST00000484922 EEA1Q15075 1411 aa4.3□□□□□ -1.72
SHROOM4-205ENST00000484922 ST18O60284 1047 aa4.3□□□□□ -1.72
SHROOM4-205ENST00000484922 PYGBP11216 843 aa4.3□□□□□ -1.72
SHROOM4-205ENST00000484922 IER5LQ5T953 404 aa4.3□□□□□ -1.72
SHROOM4-205ENST00000484922 GRIN2AQ12879 1464 aa4.3□□□□□ -1.72
SHROOM4-205ENST00000484922 PCDHB8Q9UN66 801 aa4.29□□□□□ -1.72
SHROOM4-205ENST00000484922 CTTNBP2Q8WZ74 1663 aa4.29□□□□□ -1.72
SHROOM4-205ENST00000484922 CARMIL1Q5VZK9 1371 aa4.28□□□□□ -1.72
SHROOM4-205ENST00000484922 PLCG2P16885 1265 aa4.28□□□□□ -1.72
SHROOM4-205ENST00000484922 IRX5P78411 483 aaPredicted RBP4.28□□□□□ -1.72
SHROOM4-205ENST00000484922 FAM9AQ8IZU1 332 aaPredicted RBP4.28□□□□□ -1.72
SHROOM4-205ENST00000484922 FAM212AQ96EL1 285 aa4.28□□□□□ -1.72
SHROOM4-205ENST00000484922 ZBTB47Q9UFB7 747 aaPredicted RBP4.28□□□□□ -1.72
SHROOM4-205ENST00000484922 RAPGEF2Q9Y4G8 1499 aa4.28□□□□□ -1.72
SHROOM4-205ENST00000484922 IGF1RP08069 1367 aa4.27□□□□□ -1.73
SHROOM4-205ENST00000484922 CLASP1Q7Z460 1538 aa4.26□□□□□ -1.73
SHROOM4-205ENST00000484922 RIMBP3CA6NJZ7 1639 aa4.26□□□□□ -1.73
SHROOM4-205ENST00000484922 RIMBP3BA6NNM3 1639 aa4.26□□□□□ -1.73
SHROOM4-205ENST00000484922 RIMBP3Q9UFD9 1639 aa4.26□□□□□ -1.73
SHROOM4-205ENST00000484922 OCEL1Q9H607 264 aa4.26□□□□□ -1.73
SHROOM4-205ENST00000484922 NUP160Q12769 1436 aa4.26□□□□□ -1.73
SHROOM4-205ENST00000484922 CEP170Q5SW79 1584 aa4.26□□□□□ -1.73
SHROOM4-205ENST00000484922 KIAA0586Q9BVV6 1533 aa4.26□□□□□ -1.73
SHROOM4-205ENST00000484922 IQGAP2Q13576 1575 aa4.25□□□□□ -1.73
SHROOM4-205ENST00000484922 ARHGEF11O15085 1522 aa4.25□□□□□ -1.73
SHROOM4-205ENST00000484922 RUSC2Q8N2Y8 1516 aa4.25□□□□□ -1.73
SHROOM4-205ENST00000484922 KIF21BO75037 1637 aa4.24□□□□□ -1.73
SHROOM4-205ENST00000484922 SHROOM2Q13796 1616 aa4.24□□□□□ -1.73
SHROOM4-205ENST00000484922 CARMIL2Q6F5E8 1435 aa4.24□□□□□ -1.73
SHROOM4-205ENST00000484922 MARVELD3Q96A59 401 aa4.24□□□□□ -1.73
SHROOM4-205ENST00000484922 JPH4Q96JJ6 628 aa4.24□□□□□ -1.73
SHROOM4-205ENST00000484922 GOLGA3Q08378 1498 aa4.23□□□□□ -1.73
SHROOM4-205ENST00000484922 PRXQ9BXM0 1461 aa4.23□□□□□ -1.73
SHROOM4-205ENST00000484922 PRG4Q92954 1404 aaPredicted RBP4.22□□□□□ -1.73
SHROOM4-205ENST00000484922 UBTFP17480 764 aaKnown RBP4.22□□□□□ -1.73
SHROOM4-205ENST00000484922 KLHL34Q8N239 644 aa4.22□□□□□ -1.73
SHROOM4-205ENST00000484922 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.22□□□□□ -1.73
SHROOM4-205ENST00000484922 MMRN1Q13201 1228 aa4.21□□□□□ -1.74
SHROOM4-205ENST00000484922 CYB5RLQ6IPT4 315 aa4.21□□□□□ -1.74
SHROOM4-205ENST00000484922 SPNS2Q8IVW8 549 aa4.21□□□□□ -1.74
SHROOM4-205ENST00000484922 UGGT2Q9NYU1 1516 aa4.21□□□□□ -1.74
SHROOM4-205ENST00000484922 DPY19L2Q6NUT2 758 aa4.2□□□□□ -1.74
SHROOM4-205ENST00000484922 PDCD7Q8N8D1 485 aaKnown RBP4.2□□□□□ -1.74
SHROOM4-205ENST00000484922 ARAP1Q96P48 1450 aa4.19□□□□□ -1.74
SHROOM4-205ENST00000484922 TNIKQ9UKE5 1360 aa4.19□□□□□ -1.74
SHROOM4-205ENST00000484922 POTEB3A0JP26 581 aa4.19□□□□□ -1.74
SHROOM4-205ENST00000484922 POTEBQ6S5H4 581 aa4.19□□□□□ -1.74
SHROOM4-205ENST00000484922 FBXO3Q9UK99 471 aa4.19□□□□□ -1.74
SHROOM4-205ENST00000484922 KIAA0556O60303 1618 aa4.19□□□□□ -1.74
SHROOM4-205ENST00000484922 EFCAB5A4FU69 1503 aa4.19□□□□□ -1.74
SHROOM4-205ENST00000484922 PTPRGP23470 1445 aa4.19□□□□□ -1.74
SHROOM4-205ENST00000484922 SNPHO15079 494 aa4.18□□□□□ -1.74
SHROOM4-205ENST00000484922 PSEN1P49768 467 aa4.18□□□□□ -1.74
SHROOM4-205ENST00000484922 MKRN3Q13064 507 aaKnown RBP4.18□□□□□ -1.74
SHROOM4-205ENST00000484922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.18□□□□□ -1.74
SHROOM4-205ENST00000484922 CHRM1P11229 460 aaPredicted RBP4.17□□□□□ -1.74
SHROOM4-205ENST00000484922 VASPP50552 380 aaPredicted RBP4.17□□□□□ -1.74
SHROOM4-205ENST00000484922 GOLGA2Q08379 1002 aa4.17□□□□□ -1.74
SHROOM4-205ENST00000484922 GSE1Q14687 1217 aa4.17□□□□□ -1.74
SHROOM4-205ENST00000484922 TMEM121BQ9BXQ6 578 aaPredicted RBP4.17□□□□□ -1.74
SHROOM4-205ENST00000484922 SAMD9Q5K651 1589 aa4.17□□□□□ -1.74
SHROOM4-205ENST00000484922 ERCC6L2Q5T890 1561 aa4.17□□□□□ -1.74
SHROOM4-205ENST00000484922 TTBK1Q5TCY1 1321 aaPredicted RBP4.17□□□□□ -1.74
SHROOM4-205ENST00000484922 DISP1Q96F81 1524 aa4.16□□□□□ -1.74
SHROOM4-205ENST00000484922 ZNF467Q7Z7K2 595 aaPredicted RBP4.16□□□□□ -1.74
SHROOM4-205ENST00000484922 L3MBTL3Q96JM7 780 aaPredicted RBP4.16□□□□□ -1.74
SHROOM4-205ENST00000484922 FMN1Q68DA7 1419 aa4.15□□□□□ -1.74
SHROOM4-205ENST00000484922 UACAQ9BZF9 1416 aa4.15□□□□□ -1.74
SHROOM4-205ENST00000484922 ADCY10Q96PN6 1610 aa4.15□□□□□ -1.74
SHROOM4-205ENST00000484922 FAM205CA6NFA0 338 aa4.15□□□□□ -1.75
SHROOM4-205ENST00000484922 RANGAP1P46060 587 aaPredicted RBP4.15□□□□□ -1.75
SHROOM4-205ENST00000484922 EMP3P54852 163 aa4.15□□□□□ -1.75
SHROOM4-205ENST00000484922 C3orf67Q6ZVT6 689 aa4.15□□□□□ -1.75
SHROOM4-205ENST00000484922 UHRF1BP1LA0JNW5 1464 aa4.15□□□□□ -1.75
SHROOM4-205ENST00000484922 ABCC2Q92887 1545 aa4.15□□□□□ -1.75
SHROOM4-205ENST00000484922 RAPGEF6Q8TEU7 1601 aa4.14□□□□□ -1.75
SHROOM4-205ENST00000484922 IFNLR1Q8IU57 520 aaPredicted RBP4.14□□□□□ -1.75
SHROOM4-205ENST00000484922 P3H3Q8IVL6 736 aa4.14□□□□□ -1.75
SHROOM4-205ENST00000484922 KRTAP3-3Q9BYR6 98 aa4.14□□□□□ -1.75
SHROOM4-205ENST00000484922 KRTAP3-2Q9BYR7 98 aa4.14□□□□□ -1.75
SHROOM4-205ENST00000484922 CIZ1Q9ULV3 898 aaPredicted RBP4.14□□□□□ -1.75
SHROOM4-205ENST00000484922 MAPKBP1O60336 1514 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms