RNA–Protein interactions for RNA: ENST00000483891.1

COPS6-209, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-209ENST00000483891 RANGAP1P46060 587 aaPredicted RBP9.83□□□□□ -0.84
COPS6-209ENST00000483891 ATP10BO94823 1461 aa9.83□□□□□ -0.84
COPS6-209ENST00000483891 CTTNBP2Q8WZ74 1663 aa9.83□□□□□ -0.84
COPS6-209ENST00000483891 AKNAQ7Z591 1439 aa9.82□□□□□ -0.84
COPS6-209ENST00000483891 MAGI2Q86UL8 1455 aa9.82□□□□□ -0.84
COPS6-209ENST00000483891 DENND4BO75064 1496 aaPredicted RBP9.81□□□□□ -0.84
COPS6-209ENST00000483891 MSH5O43196 834 aa9.81□□□□□ -0.84
COPS6-209ENST00000483891 EFCAB5A4FU69 1503 aa9.81□□□□□ -0.84
COPS6-209ENST00000483891 ARHGEF12Q9NZN5 1544 aa9.81□□□□□ -0.84
COPS6-209ENST00000483891 LOC105371045A0A1W2PR82 267 aa9.8□□□□□ -0.84
COPS6-209ENST00000483891 CFAP74Q9C0B2 1584 aa9.79□□□□□ -0.84
COPS6-209ENST00000483891 ZFYVE16Q7Z3T8 1539 aa9.78□□□□□ -0.84
COPS6-209ENST00000483891 UHRF1BP1Q6BDS2 1440 aa9.76□□□□□ -0.85
COPS6-209ENST00000483891 HECW1Q76N89 1606 aa9.74□□□□□ -0.85
COPS6-209ENST00000483891 MED1Q15648 1581 aaPredicted RBP9.73□□□□□ -0.85
COPS6-209ENST00000483891 NCOA1Q15788 1441 aa9.72□□□□□ -0.85
COPS6-209ENST00000483891 ATP10AO60312 1499 aa9.72□□□□□ -0.85
COPS6-209ENST00000483891 P3H3Q8IVL6 736 aa9.71□□□□□ -0.86
COPS6-209ENST00000483891 C9orf84Q5VXU9 1444 aa9.71□□□□□ -0.86
COPS6-209ENST00000483891 RAPGEF6Q8TEU7 1601 aa9.71□□□□□ -0.86
COPS6-209ENST00000483891 CEP162Q5TB80 1403 aa9.7□□□□□ -0.86
COPS6-209ENST00000483891 C3P01024 1663 aa9.7□□□□□ -0.86
COPS6-209ENST00000483891 CEBPAP49715 358 aaPredicted RBP9.69□□□□□ -0.86
COPS6-209ENST00000483891 MLECQ14165 292 aa9.69□□□□□ -0.86
COPS6-209ENST00000483891 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.68□□□□□ -0.86
COPS6-209ENST00000483891 CLIP1P30622 1438 aa9.68□□□□□ -0.86
COPS6-209ENST00000483891 REREQ9P2R6 1566 aa9.67□□□□□ -0.86
COPS6-209ENST00000483891 TRAPPC8Q9Y2L5 1435 aa9.67□□□□□ -0.86
COPS6-209ENST00000483891 UBAP1LF5GYI3 381 aa9.67□□□□□ -0.86
COPS6-209ENST00000483891 SAMD9Q5K651 1589 aa9.67□□□□□ -0.86
COPS6-209ENST00000483891 NUP153P49790 1475 aaKnown RBP9.66□□□□□ -0.86
COPS6-209ENST00000483891 ARHGAP35Q9NRY4 1499 aa9.66□□□□□ -0.86
COPS6-209ENST00000483891 ARID3CA6NKF2 412 aa9.65□□□□□ -0.86
COPS6-209ENST00000483891 PLEKHD1A6NEE1 506 aa9.64□□□□□ -0.87
COPS6-209ENST00000483891 PPP4R3CPQ6ZMV5 832 aa9.64□□□□□ -0.87
COPS6-209ENST00000483891 AGLP35573 1532 aa9.64□□□□□ -0.87
COPS6-209ENST00000483891 SCAPERQ9BY12 1400 aa9.64□□□□□ -0.87
COPS6-209ENST00000483891 CAMSAP1Q5T5Y3 1602 aa9.64□□□□□ -0.87
COPS6-209ENST00000483891 PLCH2O75038 1416 aa9.63□□□□□ -0.87
COPS6-209ENST00000483891 KDM5CP41229 1560 aa9.63□□□□□ -0.87
COPS6-209ENST00000483891 ZNF335Q9H4Z2 1342 aaPredicted RBP9.62□□□□□ -0.87
COPS6-209ENST00000483891 PLA2R1Q13018 1463 aa9.62□□□□□ -0.87
COPS6-209ENST00000483891 HSPA1LP34931 641 aa9.62□□□□□ -0.87
COPS6-209ENST00000483891 PKD2Q13563 968 aa9.61□□□□□ -0.87
COPS6-209ENST00000483891 NPATQ14207 1427 aa9.61□□□□□ -0.87
COPS6-209ENST00000483891 MROH2AA6NES4 1674 aa9.61□□□□□ -0.87
COPS6-209ENST00000483891 ZNF142P52746 1687 aaPredicted RBP9.61□□□□□ -0.87
COPS6-209ENST00000483891 TCOF1Q13428 1488 aaKnown RBP9.6□□□□□ -0.87
COPS6-209ENST00000483891 CNTLNQ9NXG0 1405 aa9.6□□□□□ -0.87
COPS6-209ENST00000483891 ZNF518AQ6AHZ1 1483 aa9.59□□□□□ -0.87
COPS6-209ENST00000483891 DIP2CQ9Y2E4 1556 aa9.59□□□□□ -0.87
COPS6-209ENST00000483891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.59□□□□□ -0.87
COPS6-209ENST00000483891 HNRNPUL2Q1KMD3 747 aaKnown RBP9.59□□□□□ -0.87
COPS6-209ENST00000483891 ATP1B4Q9UN42 357 aaPredicted RBP9.59□□□□□ -0.87
COPS6-209ENST00000483891 TOM1O60784 492 aa9.58□□□□□ -0.88
COPS6-209ENST00000483891 SUPT6HQ7KZ85 1726 aaKnown RBP9.57□□□□□ -0.88
COPS6-209ENST00000483891 MYO5CQ9NQX4 1742 aa9.57□□□□□ -0.88
COPS6-209ENST00000483891 MLH3Q9UHC1 1453 aa9.57□□□□□ -0.88
COPS6-209ENST00000483891 FMN1Q68DA7 1419 aa9.56□□□□□ -0.88
COPS6-209ENST00000483891 CPS1P31327 1500 aa9.56□□□□□ -0.88
COPS6-209ENST00000483891 EFCAB2Q5VUJ9 269 aa9.55□□□□□ -0.88
COPS6-209ENST00000483891 ABCA6Q8N139 1617 aa9.55□□□□□ -0.88
COPS6-209ENST00000483891 ALKQ9UM73 1620 aa9.55□□□□□ -0.88
COPS6-209ENST00000483891 NCKAP5LQ9HCH0 1330 aa9.55□□□□□ -0.88
COPS6-209ENST00000483891 KCNA4P22459 653 aa9.54□□□□□ -0.88
COPS6-209ENST00000483891 VPS8Q8N3P4 1428 aa9.54□□□□□ -0.88
COPS6-209ENST00000483891 MYO3AQ8NEV4 1616 aa9.53□□□□□ -0.88
COPS6-209ENST00000483891 ESF1Q9H501 851 aaKnown RBP9.53□□□□□ -0.88
COPS6-209ENST00000483891 PTPRKQ15262 1439 aa9.53□□□□□ -0.88
COPS6-209ENST00000483891 RGS17Q9UGC6 210 aaPredicted RBP9.52□□□□□ -0.89
COPS6-209ENST00000483891 CEP170BQ9Y4F5 1589 aaPredicted RBP9.52□□□□□ -0.89
COPS6-209ENST00000483891 CDK13Q14004 1512 aaKnown RBP9.51□□□□□ -0.89
COPS6-209ENST00000483891 CASKIN1Q8WXD9 1431 aa9.51□□□□□ -0.89
COPS6-209ENST00000483891 AFAP1Q8N556 730 aa9.51□□□□□ -0.89
COPS6-209ENST00000483891 FYCO1Q9BQS8 1478 aa9.51□□□□□ -0.89
COPS6-209ENST00000483891 SCAF1Q9H7N4 1312 aaKnown RBP9.51□□□□□ -0.89
COPS6-209ENST00000483891 ZMYM3Q14202 1370 aa9.5□□□□□ -0.89
COPS6-209ENST00000483891 PIP4K2BP78356 416 aa9.5□□□□□ -0.89
COPS6-209ENST00000483891 SHANK2Q9UPX8 1470 aa9.5□□□□□ -0.89
COPS6-209ENST00000483891 POLR1AO95602 1720 aaPredicted RBP9.5□□□□□ -0.89
COPS6-209ENST00000483891 KIDINS220Q9ULH0 1771 aa9.5□□□□□ -0.89
COPS6-209ENST00000483891 CDC42BPBQ9Y5S2 1711 aa9.48□□□□□ -0.89
COPS6-209ENST00000483891 NEURL4Q96JN8 1562 aa9.47□□□□□ -0.89
COPS6-209ENST00000483891 DNMT1P26358 1616 aaKnown RBP9.47□□□□□ -0.89
COPS6-209ENST00000483891 VWDEQ8N2E2 1590 aa9.46□□□□□ -0.89
COPS6-209ENST00000483891 APLP2Q06481 763 aa9.46□□□□□ -0.9
COPS6-209ENST00000483891 A2ML1A8K2U0 1454 aa9.46□□□□□ -0.9
COPS6-209ENST00000483891 CCDC18Q5T9S5 1454 aa9.46□□□□□ -0.9
COPS6-209ENST00000483891 ARHGAP5Q13017 1502 aa9.46□□□□□ -0.9
COPS6-209ENST00000483891 CLTCQ00610 1675 aaKnown RBP9.45□□□□□ -0.9
COPS6-209ENST00000483891 ITSN2Q9NZM3 1697 aa9.45□□□□□ -0.9
COPS6-209ENST00000483891 LRRIQ1Q96JM4 1722 aa9.45□□□□□ -0.9
COPS6-209ENST00000483891 ABCC1P33527 1531 aa9.45□□□□□ -0.9
COPS6-209ENST00000483891 KIF14Q15058 1648 aa9.45□□□□□ -0.9
COPS6-209ENST00000483891 NCBP3Q53F19 620 aaKnown RBP9.44□□□□□ -0.9
COPS6-209ENST00000483891 PPARGC1BQ86YN6 1023 aaKnown RBP9.44□□□□□ -0.9
COPS6-209ENST00000483891 TIAM1Q13009 1591 aa9.44□□□□□ -0.9
COPS6-209ENST00000483891 SRCAPQ6ZRS2 3230 aa9.44□□□□□ -0.9
COPS6-209ENST00000483891 RNF17Q9BXT8 1623 aaKnown RBP9.43□□□□□ -0.9
COPS6-209ENST00000483891 MED14O60244 1454 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms