RNA–Protein interactions for RNA: ENST00000481761.1

UBP1-209, Transcript of upstream binding protein 1, humanhuman

TSL 3

Gene UBP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-209ENST00000481761 MAGI2Q86UL8 1455 aa13.61□□□□□ -0.23
UBP1-209ENST00000481761 ARID3CA6NKF2 412 aa13.61□□□□□ -0.23
UBP1-209ENST00000481761 SUPT5HO00267 1087 aaKnown RBP13.61□□□□□ -0.23
UBP1-209ENST00000481761 CEBPAP49715 358 aaPredicted RBP13.59□□□□□ -0.23
UBP1-209ENST00000481761 NCOA1Q15788 1441 aa13.58□□□□□ -0.24
UBP1-209ENST00000481761 MLECQ14165 292 aa13.58□□□□□ -0.24
UBP1-209ENST00000481761 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.58□□□□□ -0.24
UBP1-209ENST00000481761 SAMD9Q5K651 1589 aa13.56□□□□□ -0.24
UBP1-209ENST00000481761 C9orf84Q5VXU9 1444 aa13.55□□□□□ -0.24
UBP1-209ENST00000481761 NUP153P49790 1475 aaKnown RBP13.55□□□□□ -0.24
UBP1-209ENST00000481761 ATP10AO60312 1499 aa13.54□□□□□ -0.24
UBP1-209ENST00000481761 CAMSAP1Q5T5Y3 1602 aa13.52□□□□□ -0.25
UBP1-209ENST00000481761 SUPT6HQ7KZ85 1726 aaKnown RBP13.5□□□□□ -0.25
UBP1-209ENST00000481761 ZNF142P52746 1687 aaPredicted RBP13.5□□□□□ -0.25
UBP1-209ENST00000481761 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
UBP1-209ENST00000481761 DIP2CQ9Y2E4 1556 aa13.49□□□□□ -0.25
UBP1-209ENST00000481761 UBAP1LF5GYI3 381 aa13.49□□□□□ -0.25
UBP1-209ENST00000481761 KDM5CP41229 1560 aa13.49□□□□□ -0.25
UBP1-209ENST00000481761 ZNF335Q9H4Z2 1342 aaPredicted RBP13.48□□□□□ -0.25
UBP1-209ENST00000481761 ABCA6Q8N139 1617 aa13.48□□□□□ -0.25
UBP1-209ENST00000481761 ALKQ9UM73 1620 aa13.47□□□□□ -0.25
UBP1-209ENST00000481761 MYO5CQ9NQX4 1742 aa13.46□□□□□ -0.25
UBP1-209ENST00000481761 MROH2AA6NES4 1674 aa13.45□□□□□ -0.26
UBP1-209ENST00000481761 HSPA1LP34931 641 aa13.45□□□□□ -0.26
UBP1-209ENST00000481761 SCAPERQ9BY12 1400 aa13.45□□□□□ -0.26
UBP1-209ENST00000481761 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
UBP1-209ENST00000481761 MYO3AQ8NEV4 1616 aa13.44□□□□□ -0.26
UBP1-209ENST00000481761 TRAPPC8Q9Y2L5 1435 aa13.44□□□□□ -0.26
UBP1-209ENST00000481761 AGLP35573 1532 aa13.43□□□□□ -0.26
UBP1-209ENST00000481761 TCOF1Q13428 1488 aaKnown RBP13.42□□□□□ -0.26
UBP1-209ENST00000481761 P3H3Q8IVL6 736 aa13.41□□□□□ -0.26
UBP1-209ENST00000481761 PLA2R1Q13018 1463 aa13.4□□□□□ -0.26
UBP1-209ENST00000481761 POLR1AO95602 1720 aaPredicted RBP13.39□□□□□ -0.27
UBP1-209ENST00000481761 PLCH2O75038 1416 aa13.39□□□□□ -0.27
UBP1-209ENST00000481761 ZNF518AQ6AHZ1 1483 aa13.38□□□□□ -0.27
UBP1-209ENST00000481761 CEP170BQ9Y4F5 1589 aaPredicted RBP13.37□□□□□ -0.27
UBP1-209ENST00000481761 SETD1AO15047 1707 aaKnown RBP13.37□□□□□ -0.27
UBP1-209ENST00000481761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
UBP1-209ENST00000481761 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
UBP1-209ENST00000481761 NPATQ14207 1427 aa13.36□□□□□ -0.27
UBP1-209ENST00000481761 NCKAP5LQ9HCH0 1330 aa13.36□□□□□ -0.27
UBP1-209ENST00000481761 NEURL4Q96JN8 1562 aa13.35□□□□□ -0.27
UBP1-209ENST00000481761 KIDINS220Q9ULH0 1771 aa13.35□□□□□ -0.27
UBP1-209ENST00000481761 CDK13Q14004 1512 aaKnown RBP13.34□□□□□ -0.27
UBP1-209ENST00000481761 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
UBP1-209ENST00000481761 KIF14Q15058 1648 aa13.34□□□□□ -0.27
UBP1-209ENST00000481761 CPS1P31327 1500 aa13.34□□□□□ -0.27
UBP1-209ENST00000481761 RGS17Q9UGC6 210 aaPredicted RBP13.33□□□□□ -0.28
UBP1-209ENST00000481761 CLTCQ00610 1675 aaKnown RBP13.33□□□□□ -0.28
UBP1-209ENST00000481761 CDC42BPBQ9Y5S2 1711 aa13.33□□□□□ -0.28
UBP1-209ENST00000481761 CNTLNQ9NXG0 1405 aa13.32□□□□□ -0.28
UBP1-209ENST00000481761 ITSN2Q9NZM3 1697 aa13.32□□□□□ -0.28
UBP1-209ENST00000481761 MLH3Q9UHC1 1453 aa13.31□□□□□ -0.28
UBP1-209ENST00000481761 PLEKHD1A6NEE1 506 aa13.31□□□□□ -0.28
UBP1-209ENST00000481761 PIP4K2BP78356 416 aa13.31□□□□□ -0.28
UBP1-209ENST00000481761 STRCP1A6NGW2 1772 aa13.3□□□□□ -0.28
UBP1-209ENST00000481761 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
UBP1-209ENST00000481761 VWDEQ8N2E2 1590 aa13.29□□□□□ -0.28
UBP1-209ENST00000481761 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
UBP1-209ENST00000481761 ABCC1P33527 1531 aa13.27□□□□□ -0.29
UBP1-209ENST00000481761 PKD2Q13563 968 aa13.26□□□□□ -0.29
UBP1-209ENST00000481761 FAM9AQ8IZU1 332 aaPredicted RBP13.26□□□□□ -0.29
UBP1-209ENST00000481761 AFAP1Q8N556 730 aa13.26□□□□□ -0.29
UBP1-209ENST00000481761 SENP3Q9H4L4 574 aaPredicted RBP13.26□□□□□ -0.29
UBP1-209ENST00000481761 SHANK2Q9UPX8 1470 aa13.26□□□□□ -0.29
UBP1-209ENST00000481761 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
UBP1-209ENST00000481761 RNF17Q9BXT8 1623 aaKnown RBP13.25□□□□□ -0.29
UBP1-209ENST00000481761 TOM1O60784 492 aa13.25□□□□□ -0.29
UBP1-209ENST00000481761 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
UBP1-209ENST00000481761 ARHGAP5Q13017 1502 aa13.24□□□□□ -0.29
UBP1-209ENST00000481761 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
UBP1-209ENST00000481761 PTPRKQ15262 1439 aa13.23□□□□□ -0.29
UBP1-209ENST00000481761 ZMYM3Q14202 1370 aa13.22□□□□□ -0.29
UBP1-209ENST00000481761 PLXNC1O60486 1568 aa13.22□□□□□ -0.29
UBP1-209ENST00000481761 XIRP1Q702N8 1843 aaKnown RBP13.22□□□□□ -0.29
UBP1-209ENST00000481761 SRCAPQ6ZRS2 3230 aa13.21□□□□□ -0.29
UBP1-209ENST00000481761 SYNMO15061 1565 aa13.21□□□□□ -0.29
UBP1-209ENST00000481761 EFCAB2Q5VUJ9 269 aa13.21□□□□□ -0.29
UBP1-209ENST00000481761 A2ML1A8K2U0 1454 aa13.2□□□□□ -0.3
UBP1-209ENST00000481761 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
UBP1-209ENST00000481761 POTEAQ6S8J7 498 aa13.18□□□□□ -0.3
UBP1-209ENST00000481761 ESF1Q9H501 851 aaKnown RBP13.18□□□□□ -0.3
UBP1-209ENST00000481761 SAMD9LQ8IVG5 1584 aa13.17□□□□□ -0.3
UBP1-209ENST00000481761 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
UBP1-209ENST00000481761 IQGAP1P46940 1657 aa13.16□□□□□ -0.3
UBP1-209ENST00000481761 LRRC7Q96NW7 1537 aa13.15□□□□□ -0.3
UBP1-209ENST00000481761 INO80Q9ULG1 1556 aaPredicted RBP13.15□□□□□ -0.3
UBP1-209ENST00000481761 ZC3H13Q5T200 1668 aaKnown RBP13.14□□□□□ -0.31
UBP1-209ENST00000481761 MED14O60244 1454 aa13.12□□□□□ -0.31
UBP1-209ENST00000481761 TROQ12816 1431 aaPredicted RBP13.12□□□□□ -0.31
UBP1-209ENST00000481761 MYT1LQ9UL68 1186 aa13.11□□□□□ -0.31
UBP1-209ENST00000481761 ATP7AQ04656 1500 aa13.09□□□□□ -0.31
UBP1-209ENST00000481761 ADGBQ8N7X0 1667 aa13.08□□□□□ -0.31
UBP1-209ENST00000481761 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.32
UBP1-209ENST00000481761 NPHP4O75161 1426 aaPredicted RBP13.06□□□□□ -0.32
UBP1-209ENST00000481761 RANGAP1P46060 587 aaPredicted RBP13.06□□□□□ -0.32
UBP1-209ENST00000481761 ROBO1Q9Y6N7 1651 aa13.05□□□□□ -0.32
UBP1-209ENST00000481761 A2MP01023 1474 aa13.04□□□□□ -0.32
UBP1-209ENST00000481761 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.03□□□□□ -0.32
UBP1-209ENST00000481761 CLIP1P30622 1438 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms