RNA–Protein interactions for RNA: ENST00000481081.1

CASQ1-203, Transcript of calsequestrin 1, humanhuman

TSL 2

Gene CASQ1, Length 869 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1-203ENST00000481081 LTBP4Q8N2S1 1624 aa12.55□□□□□ -0.4
CASQ1-203ENST00000481081 PTPRTO14522 1441 aa12.55□□□□□ -0.4
CASQ1-203ENST00000481081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
CASQ1-203ENST00000481081 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
CASQ1-203ENST00000481081 SAMD9Q5K651 1589 aa12.55□□□□□ -0.4
CASQ1-203ENST00000481081 SETD1BQ9UPS6 1966 aaKnown RBP12.54□□□□□ -0.4
CASQ1-203ENST00000481081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.54□□□□□ -0.4
CASQ1-203ENST00000481081 CFAP74Q9C0B2 1584 aa12.54□□□□□ -0.4
CASQ1-203ENST00000481081 IQSEC2Q5JU85 1478 aa12.53□□□□□ -0.4
CASQ1-203ENST00000481081 ATP10AO60312 1499 aa12.52□□□□□ -0.41
CASQ1-203ENST00000481081 PLEKHD1A6NEE1 506 aa12.51□□□□□ -0.41
CASQ1-203ENST00000481081 UHRF1BP1Q6BDS2 1440 aa12.51□□□□□ -0.41
CASQ1-203ENST00000481081 C9orf84Q5VXU9 1444 aa12.5□□□□□ -0.41
CASQ1-203ENST00000481081 SCAPERQ9BY12 1400 aa12.49□□□□□ -0.41
CASQ1-203ENST00000481081 PLCH2O75038 1416 aa12.46□□□□□ -0.41
CASQ1-203ENST00000481081 NCOA1Q15788 1441 aa12.44□□□□□ -0.42
CASQ1-203ENST00000481081 C3P01024 1663 aa12.43□□□□□ -0.42
CASQ1-203ENST00000481081 TRAPPC8Q9Y2L5 1435 aa12.41□□□□□ -0.42
CASQ1-203ENST00000481081 KDM5CP41229 1560 aa12.39□□□□□ -0.43
CASQ1-203ENST00000481081 REREQ9P2R6 1566 aa12.39□□□□□ -0.43
CASQ1-203ENST00000481081 UBAP1LF5GYI3 381 aa12.39□□□□□ -0.43
CASQ1-203ENST00000481081 EFCAB2Q5VUJ9 269 aa12.38□□□□□ -0.43
CASQ1-203ENST00000481081 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
CASQ1-203ENST00000481081 ZNF518AQ6AHZ1 1483 aa12.38□□□□□ -0.43
CASQ1-203ENST00000481081 DIP2CQ9Y2E4 1556 aa12.38□□□□□ -0.43
CASQ1-203ENST00000481081 ZNF335Q9H4Z2 1342 aaPredicted RBP12.37□□□□□ -0.43
CASQ1-203ENST00000481081 CDK13Q14004 1512 aaKnown RBP12.37□□□□□ -0.43
CASQ1-203ENST00000481081 CAMSAP1Q5T5Y3 1602 aa12.36□□□□□ -0.43
CASQ1-203ENST00000481081 AGLP35573 1532 aa12.36□□□□□ -0.43
CASQ1-203ENST00000481081 CSRNP3Q8WYN3 585 aa12.35□□□□□ -0.43
CASQ1-203ENST00000481081 MED1Q15648 1581 aaPredicted RBP12.35□□□□□ -0.43
CASQ1-203ENST00000481081 ABCA6Q8N139 1617 aa12.34□□□□□ -0.43
CASQ1-203ENST00000481081 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
CASQ1-203ENST00000481081 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
CASQ1-203ENST00000481081 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
CASQ1-203ENST00000481081 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
CASQ1-203ENST00000481081 HSPA1LP34931 641 aa12.32□□□□□ -0.44
CASQ1-203ENST00000481081 NPATQ14207 1427 aa12.31□□□□□ -0.44
CASQ1-203ENST00000481081 CNTLNQ9NXG0 1405 aa12.31□□□□□ -0.44
CASQ1-203ENST00000481081 KIF14Q15058 1648 aa12.29□□□□□ -0.44
CASQ1-203ENST00000481081 PLA2R1Q13018 1463 aa12.29□□□□□ -0.44
CASQ1-203ENST00000481081 TCOF1Q13428 1488 aaKnown RBP12.29□□□□□ -0.44
CASQ1-203ENST00000481081 ESF1Q9H501 851 aaKnown RBP12.29□□□□□ -0.44
CASQ1-203ENST00000481081 ARHGAP5Q13017 1502 aa12.28□□□□□ -0.44
CASQ1-203ENST00000481081 PKD2Q13563 968 aa12.28□□□□□ -0.44
CASQ1-203ENST00000481081 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
CASQ1-203ENST00000481081 ZMYM3Q14202 1370 aa12.28□□□□□ -0.44
CASQ1-203ENST00000481081 MROH2AA6NES4 1674 aa12.27□□□□□ -0.45
CASQ1-203ENST00000481081 KIDINS220Q9ULH0 1771 aa12.26□□□□□ -0.45
CASQ1-203ENST00000481081 ZNF142P52746 1687 aaPredicted RBP12.26□□□□□ -0.45
CASQ1-203ENST00000481081 CDC42BPBQ9Y5S2 1711 aa12.25□□□□□ -0.45
CASQ1-203ENST00000481081 TROQ12816 1431 aaPredicted RBP12.25□□□□□ -0.45
CASQ1-203ENST00000481081 ABCC1P33527 1531 aa12.24□□□□□ -0.45
CASQ1-203ENST00000481081 MYO3AQ8NEV4 1616 aa12.23□□□□□ -0.45
CASQ1-203ENST00000481081 PIP4K2BP78356 416 aa12.23□□□□□ -0.45
CASQ1-203ENST00000481081 PPP6R1Q9UPN7 881 aa12.23□□□□□ -0.45
CASQ1-203ENST00000481081 CDK11AQ9UQ88 783 aaPredicted RBP12.23□□□□□ -0.45
CASQ1-203ENST00000481081 CEP170BQ9Y4F5 1589 aaPredicted RBP12.22□□□□□ -0.45
CASQ1-203ENST00000481081 PTPRKQ15262 1439 aa12.22□□□□□ -0.45
CASQ1-203ENST00000481081 TOM1O60784 492 aa12.22□□□□□ -0.45
CASQ1-203ENST00000481081 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
CASQ1-203ENST00000481081 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.45
CASQ1-203ENST00000481081 ALKQ9UM73 1620 aa12.21□□□□□ -0.46
CASQ1-203ENST00000481081 SUPT6HQ7KZ85 1726 aaKnown RBP12.2□□□□□ -0.46
CASQ1-203ENST00000481081 PREX2Q70Z35 1606 aa12.19□□□□□ -0.46
CASQ1-203ENST00000481081 PHF23Q9BUL5 403 aaPredicted RBP12.19□□□□□ -0.46
CASQ1-203ENST00000481081 ATP1B4Q9UN42 357 aaPredicted RBP12.19□□□□□ -0.46
CASQ1-203ENST00000481081 CPS1P31327 1500 aa12.19□□□□□ -0.46
CASQ1-203ENST00000481081 FMN1Q68DA7 1419 aa12.19□□□□□ -0.46
CASQ1-203ENST00000481081 CLTCQ00610 1675 aaKnown RBP12.18□□□□□ -0.46
CASQ1-203ENST00000481081 CLIP1P30622 1438 aa12.18□□□□□ -0.46
CASQ1-203ENST00000481081 EEA1Q15075 1411 aa12.18□□□□□ -0.46
CASQ1-203ENST00000481081 SAMD9LQ8IVG5 1584 aa12.18□□□□□ -0.46
CASQ1-203ENST00000481081 LRRIQ1Q96JM4 1722 aa12.17□□□□□ -0.46
CASQ1-203ENST00000481081 SHANK2Q9UPX8 1470 aa12.17□□□□□ -0.46
CASQ1-203ENST00000481081 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
CASQ1-203ENST00000481081 DNMT1P26358 1616 aaKnown RBP12.16□□□□□ -0.46
CASQ1-203ENST00000481081 NEURL4Q96JN8 1562 aa12.16□□□□□ -0.46
CASQ1-203ENST00000481081 A2ML1A8K2U0 1454 aa12.15□□□□□ -0.46
CASQ1-203ENST00000481081 ARHGAP35Q9NRY4 1499 aa12.15□□□□□ -0.46
CASQ1-203ENST00000481081 PLXNC1O60486 1568 aa12.15□□□□□ -0.46
CASQ1-203ENST00000481081 VWDEQ8N2E2 1590 aa12.13□□□□□ -0.47
CASQ1-203ENST00000481081 POLR1AO95602 1720 aaPredicted RBP12.12□□□□□ -0.47
CASQ1-203ENST00000481081 CDC42BPAQ5VT25 1732 aa12.12□□□□□ -0.47
CASQ1-203ENST00000481081 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
CASQ1-203ENST00000481081 A2MP01023 1474 aa12.11□□□□□ -0.47
CASQ1-203ENST00000481081 GGT6Q6P531 493 aa12.11□□□□□ -0.47
CASQ1-203ENST00000481081 ATP7AQ04656 1500 aa12.1□□□□□ -0.47
CASQ1-203ENST00000481081 SYCP2Q9BX26 1530 aa12.1□□□□□ -0.47
CASQ1-203ENST00000481081 HNRNPMP52272 730 aaKnown RBP eCLIP12.09□□□□□ -0.47
CASQ1-203ENST00000481081 INO80Q9ULG1 1556 aaPredicted RBP12.09□□□□□ -0.47
CASQ1-203ENST00000481081 MED14O60244 1454 aa12.08□□□□□ -0.47
CASQ1-203ENST00000481081 FBXO31Q5XUX0 539 aaPredicted RBP12.07□□□□□ -0.48
CASQ1-203ENST00000481081 KIAA1107Q9UPP5 1409 aa12.07□□□□□ -0.48
CASQ1-203ENST00000481081 STRCP1A6NGW2 1772 aa12.07□□□□□ -0.48
CASQ1-203ENST00000481081 GPATCH8Q9UKJ3 1502 aaKnown RBP12.06□□□□□ -0.48
CASQ1-203ENST00000481081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.06□□□□□ -0.48
CASQ1-203ENST00000481081 ANKLE2Q86XL3 938 aa12.06□□□□□ -0.48
CASQ1-203ENST00000481081 ZNF777Q9ULD5 760 aaPredicted RBP12.06□□□□□ -0.48
CASQ1-203ENST00000481081 LRRC7Q96NW7 1537 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms