RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CEBPAP49715 358 aaPredicted RBP22.42■■□□□ 1.18
NDC1-202ENST00000480952 ATP10AO60312 1499 aa22.41■■□□□ 1.18
NDC1-202ENST00000480952 EEA1Q15075 1411 aa22.41■■□□□ 1.18
NDC1-202ENST00000480952 EFCAB2Q5VUJ9 269 aa22.41■■□□□ 1.18
NDC1-202ENST00000480952 ATP1B4Q9UN42 357 aaPredicted RBP22.41■■□□□ 1.18
NDC1-202ENST00000480952 DMRT2Q9Y5R5 561 aa22.41■■□□□ 1.18
NDC1-202ENST00000480952 FER1L4A9Z1Z3 1794 aa22.38■■□□□ 1.17
NDC1-202ENST00000480952 C9orf84Q5VXU9 1444 aa22.38■■□□□ 1.17
NDC1-202ENST00000480952 CDK13Q14004 1512 aaKnown RBP22.37■■□□□ 1.17
NDC1-202ENST00000480952 DISP3Q9P2K9 1392 aa22.37■■□□□ 1.17
NDC1-202ENST00000480952 ARHGEF12Q9NZN5 1544 aa22.36■■□□□ 1.17
NDC1-202ENST00000480952 MYT1LQ9UL68 1186 aa22.35■■□□□ 1.17
NDC1-202ENST00000480952 CDK11AQ9UQ88 783 aaPredicted RBP22.34■■□□□ 1.17
NDC1-202ENST00000480952 ILDR2Q71H61 639 aa22.32■■□□□ 1.16
NDC1-202ENST00000480952 AFAP1Q8N556 730 aa22.31■■□□□ 1.16
NDC1-202ENST00000480952 PREX1Q8TCU6 1659 aa22.3■■□□□ 1.16
NDC1-202ENST00000480952 UHRF1BP1Q6BDS2 1440 aa22.29■■□□□ 1.16
NDC1-202ENST00000480952 SOCS7O14512 581 aa22.28■■□□□ 1.16
NDC1-202ENST00000480952 ZNF518AQ6AHZ1 1483 aa22.27■■□□□ 1.16
NDC1-202ENST00000480952 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
NDC1-202ENST00000480952 UBTFP17480 764 aaKnown RBP22.25■■□□□ 1.15
NDC1-202ENST00000480952 ESF1Q9H501 851 aaKnown RBP22.25■■□□□ 1.15
NDC1-202ENST00000480952 FMN1Q68DA7 1419 aa22.24■■□□□ 1.15
NDC1-202ENST00000480952 MYO5CQ9NQX4 1742 aa22.22■■□□□ 1.15
NDC1-202ENST00000480952 ARHGAP5Q13017 1502 aa22.21■■□□□ 1.15
NDC1-202ENST00000480952 STRCQ7RTU9 1775 aa22.21■■□□□ 1.15
NDC1-202ENST00000480952 PTPRTO14522 1441 aa22.19■■□□□ 1.14
NDC1-202ENST00000480952 TROQ12816 1431 aaPredicted RBP22.19■■□□□ 1.14
NDC1-202ENST00000480952 CLIP1P30622 1438 aa22.18■■□□□ 1.14
NDC1-202ENST00000480952 KIF14Q15058 1648 aa22.17■■□□□ 1.14
NDC1-202ENST00000480952 KDM5CP41229 1560 aa22.16■■□□□ 1.14
NDC1-202ENST00000480952 SETD1BQ9UPS6 1966 aaKnown RBP22.16■■□□□ 1.14
NDC1-202ENST00000480952 TRAPPC8Q9Y2L5 1435 aa22.14■■□□□ 1.14
NDC1-202ENST00000480952 DIP2CQ9Y2E4 1556 aa22.14■■□□□ 1.13
NDC1-202ENST00000480952 MLH3Q9UHC1 1453 aa22.14■■□□□ 1.13
NDC1-202ENST00000480952 ARHGAP35Q9NRY4 1499 aa22.13■■□□□ 1.13
NDC1-202ENST00000480952 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
NDC1-202ENST00000480952 REREQ9P2R6 1566 aa22.11■■□□□ 1.13
NDC1-202ENST00000480952 C3P01024 1663 aa22.08■■□□□ 1.13
NDC1-202ENST00000480952 AGLP35573 1532 aa22.08■■□□□ 1.13
NDC1-202ENST00000480952 SPATA31D1Q6ZQQ2 1576 aa22.08■■□□□ 1.12
NDC1-202ENST00000480952 ABCA6Q8N139 1617 aa22.07■■□□□ 1.12
NDC1-202ENST00000480952 NCOA1Q15788 1441 aa22.06■■□□□ 1.12
NDC1-202ENST00000480952 CNTLNQ9NXG0 1405 aa22.06■■□□□ 1.12
NDC1-202ENST00000480952 LTBP4Q8N2S1 1624 aa22.06■■□□□ 1.12
NDC1-202ENST00000480952 IQSEC2Q5JU85 1478 aa22.03■■□□□ 1.12
NDC1-202ENST00000480952 ABCC1P33527 1531 aa22.01■■□□□ 1.11
NDC1-202ENST00000480952 CDC42BPBQ9Y5S2 1711 aa22.01■■□□□ 1.11
NDC1-202ENST00000480952 ZNF777Q9ULD5 760 aaPredicted RBP22.01■■□□□ 1.11
NDC1-202ENST00000480952 NCKAP5LQ9HCH0 1330 aa22.01■■□□□ 1.11
NDC1-202ENST00000480952 ZMYM3Q14202 1370 aa21.99■■□□□ 1.11
NDC1-202ENST00000480952 NPATQ14207 1427 aa21.98■■□□□ 1.11
NDC1-202ENST00000480952 UBAP1LF5GYI3 381 aa21.98■■□□□ 1.11
NDC1-202ENST00000480952 CAMSAP1Q5T5Y3 1602 aa21.98■■□□□ 1.11
NDC1-202ENST00000480952 PREX2Q70Z35 1606 aa21.97■■□□□ 1.11
NDC1-202ENST00000480952 ZNF335Q9H4Z2 1342 aaPredicted RBP21.97■■□□□ 1.11
NDC1-202ENST00000480952 SPAG9O60271 1321 aaKnown RBP21.96■■□□□ 1.11
NDC1-202ENST00000480952 CCDC18Q5T9S5 1454 aa21.95■■□□□ 1.1
NDC1-202ENST00000480952 ITSN2Q9NZM3 1697 aa21.95■■□□□ 1.1
NDC1-202ENST00000480952 KIDINS220Q9ULH0 1771 aa21.94■■□□□ 1.1
NDC1-202ENST00000480952 HNRNPMP52272 730 aaKnown RBP eCLIP21.94■■□□□ 1.1
NDC1-202ENST00000480952 PKD2Q13563 968 aa21.94■■□□□ 1.1
NDC1-202ENST00000480952 CASKIN1Q8WXD9 1431 aa21.94■■□□□ 1.1
NDC1-202ENST00000480952 LRRIQ1Q96JM4 1722 aa21.94■■□□□ 1.1
NDC1-202ENST00000480952 SAMD9LQ8IVG5 1584 aa21.91■■□□□ 1.1
NDC1-202ENST00000480952 GGT6Q6P531 493 aa21.89■■□□□ 1.09
NDC1-202ENST00000480952 MROH2AA6NES4 1674 aa21.87■■□□□ 1.09
NDC1-202ENST00000480952 CFDP1Q9UEE9 299 aaPredicted RBP21.86■■□□□ 1.09
NDC1-202ENST00000480952 SYCP2Q9BX26 1530 aa21.85■■□□□ 1.09
NDC1-202ENST00000480952 PLA2R1Q13018 1463 aa21.85■■□□□ 1.09
NDC1-202ENST00000480952 PPP6R1Q9UPN7 881 aa21.85■■□□□ 1.09
NDC1-202ENST00000480952 CDC42BPAQ5VT25 1732 aa21.85■■□□□ 1.09
NDC1-202ENST00000480952 GPATCH8Q9UKJ3 1502 aaKnown RBP21.85■■□□□ 1.09
NDC1-202ENST00000480952 PTPRKQ15262 1439 aa21.84■■□□□ 1.09
NDC1-202ENST00000480952 A2MP01023 1474 aa21.83■■□□□ 1.09
NDC1-202ENST00000480952 SUPT6HQ7KZ85 1726 aaKnown RBP21.83■■□□□ 1.09
NDC1-202ENST00000480952 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
NDC1-202ENST00000480952 KIAA1107Q9UPP5 1409 aa21.81■■□□□ 1.08
NDC1-202ENST00000480952 TCOF1Q13428 1488 aaKnown RBP21.81■■□□□ 1.08
NDC1-202ENST00000480952 CLTCQ00610 1675 aaKnown RBP21.81■■□□□ 1.08
NDC1-202ENST00000480952 ATP7AQ04656 1500 aa21.8■■□□□ 1.08
NDC1-202ENST00000480952 CEP170BQ9Y4F5 1589 aaPredicted RBP21.79■■□□□ 1.08
NDC1-202ENST00000480952 PLEKHH2Q8IVE3 1493 aa21.79■■□□□ 1.08
NDC1-202ENST00000480952 MYO3AQ8NEV4 1616 aa21.79■■□□□ 1.08
NDC1-202ENST00000480952 FYCO1Q9BQS8 1478 aa21.78■■□□□ 1.08
NDC1-202ENST00000480952 CCNB3Q8WWL7 1395 aa21.78■■□□□ 1.08
NDC1-202ENST00000480952 PIP4K2BP78356 416 aa21.78■■□□□ 1.08
NDC1-202ENST00000480952 PLXNC1O60486 1568 aa21.76■■□□□ 1.07
NDC1-202ENST00000480952 TOM1O60784 492 aa21.76■■□□□ 1.07
NDC1-202ENST00000480952 HSPA1LP34931 641 aa21.76■■□□□ 1.07
NDC1-202ENST00000480952 ZNF142P52746 1687 aaPredicted RBP21.75■■□□□ 1.07
NDC1-202ENST00000480952 INO80Q9ULG1 1556 aaPredicted RBP21.73■■□□□ 1.07
NDC1-202ENST00000480952 A2ML1A8K2U0 1454 aa21.72■■□□□ 1.07
NDC1-202ENST00000480952 ZNF644Q9H582 1327 aaPredicted RBP21.71■■□□□ 1.07
NDC1-202ENST00000480952 MTUS2Q5JR59 1369 aa21.7■■□□□ 1.06
NDC1-202ENST00000480952 FBXO31Q5XUX0 539 aaPredicted RBP21.69■■□□□ 1.06
NDC1-202ENST00000480952 DNMT1P26358 1616 aaKnown RBP21.67■■□□□ 1.06
NDC1-202ENST00000480952 TNRQ92752 1358 aa21.67■■□□□ 1.06
NDC1-202ENST00000480952 ANKLE2Q86XL3 938 aa21.67■■□□□ 1.06
NDC1-202ENST00000480952 DHX29Q7Z478 1369 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms