RNA–Protein interactions for RNA: ENST00000480698.1

TMEM40-207, Transcript of transmembrane protein 40, humanhuman

TSL 2

Gene TMEM40, Length 507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-207ENST00000480698 ARID3CA6NKF2 412 aa16.6■□□□□ 0.25
TMEM40-207ENST00000480698 UHRF1BP1Q6BDS2 1440 aa16.59■□□□□ 0.25
TMEM40-207ENST00000480698 SETD1BQ9UPS6 1966 aaKnown RBP16.58■□□□□ 0.25
TMEM40-207ENST00000480698 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
TMEM40-207ENST00000480698 C9orf84Q5VXU9 1444 aa16.56■□□□□ 0.24
TMEM40-207ENST00000480698 ATP10AO60312 1499 aa16.55■□□□□ 0.24
TMEM40-207ENST00000480698 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
TMEM40-207ENST00000480698 CEBPAP49715 358 aaPredicted RBP16.53■□□□□ 0.24
TMEM40-207ENST00000480698 MLECQ14165 292 aa16.52■□□□□ 0.24
TMEM40-207ENST00000480698 REREQ9P2R6 1566 aa16.51■□□□□ 0.23
TMEM40-207ENST00000480698 C3P01024 1663 aa16.5■□□□□ 0.23
TMEM40-207ENST00000480698 KDM5CP41229 1560 aa16.48■□□□□ 0.23
TMEM40-207ENST00000480698 MED1Q15648 1581 aaPredicted RBP16.48■□□□□ 0.23
TMEM40-207ENST00000480698 SCAPERQ9BY12 1400 aa16.48■□□□□ 0.23
TMEM40-207ENST00000480698 PLCH2O75038 1416 aa16.46■□□□□ 0.23
TMEM40-207ENST00000480698 P3H3Q8IVL6 736 aa16.46■□□□□ 0.23
TMEM40-207ENST00000480698 DIP2CQ9Y2E4 1556 aa16.44■□□□□ 0.22
TMEM40-207ENST00000480698 FAM9AQ8IZU1 332 aaPredicted RBP16.44■□□□□ 0.22
TMEM40-207ENST00000480698 AGLP35573 1532 aa16.43■□□□□ 0.22
TMEM40-207ENST00000480698 TRAPPC8Q9Y2L5 1435 aa16.43■□□□□ 0.22
TMEM40-207ENST00000480698 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
TMEM40-207ENST00000480698 ZNF518AQ6AHZ1 1483 aa16.41■□□□□ 0.22
TMEM40-207ENST00000480698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
TMEM40-207ENST00000480698 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
TMEM40-207ENST00000480698 CAMSAP1Q5T5Y3 1602 aa16.39■□□□□ 0.21
TMEM40-207ENST00000480698 ABCA6Q8N139 1617 aa16.38■□□□□ 0.21
TMEM40-207ENST00000480698 ZNF335Q9H4Z2 1342 aaPredicted RBP16.37■□□□□ 0.21
TMEM40-207ENST00000480698 PLA2R1Q13018 1463 aa16.36■□□□□ 0.21
TMEM40-207ENST00000480698 NPATQ14207 1427 aa16.36■□□□□ 0.21
TMEM40-207ENST00000480698 TCOF1Q13428 1488 aaKnown RBP16.35■□□□□ 0.21
TMEM40-207ENST00000480698 ZNF142P52746 1687 aaPredicted RBP16.35■□□□□ 0.21
TMEM40-207ENST00000480698 UBAP1LF5GYI3 381 aa16.35■□□□□ 0.21
TMEM40-207ENST00000480698 MYO5CQ9NQX4 1742 aa16.35■□□□□ 0.21
TMEM40-207ENST00000480698 MLH3Q9UHC1 1453 aa16.35■□□□□ 0.21
TMEM40-207ENST00000480698 MROH2AA6NES4 1674 aa16.34■□□□□ 0.21
TMEM40-207ENST00000480698 CNTLNQ9NXG0 1405 aa16.33■□□□□ 0.2
TMEM40-207ENST00000480698 CDK13Q14004 1512 aaKnown RBP16.33■□□□□ 0.2
TMEM40-207ENST00000480698 HSPA1LP34931 641 aa16.29■□□□□ 0.2
TMEM40-207ENST00000480698 ALKQ9UM73 1620 aa16.28■□□□□ 0.2
TMEM40-207ENST00000480698 EFCAB2Q5VUJ9 269 aa16.28■□□□□ 0.2
TMEM40-207ENST00000480698 MYO3AQ8NEV4 1616 aa16.27■□□□□ 0.2
TMEM40-207ENST00000480698 AFAP1Q8N556 730 aa16.27■□□□□ 0.2
TMEM40-207ENST00000480698 KIF14Q15058 1648 aa16.26■□□□□ 0.19
TMEM40-207ENST00000480698 NCKAP5LQ9HCH0 1330 aa16.25■□□□□ 0.19
TMEM40-207ENST00000480698 CEP170BQ9Y4F5 1589 aaPredicted RBP16.25■□□□□ 0.19
TMEM40-207ENST00000480698 KIDINS220Q9ULH0 1771 aa16.24■□□□□ 0.19
TMEM40-207ENST00000480698 PKD2Q13563 968 aa16.24■□□□□ 0.19
TMEM40-207ENST00000480698 ABCC1P33527 1531 aa16.24■□□□□ 0.19
TMEM40-207ENST00000480698 CPS1P31327 1500 aa16.23■□□□□ 0.19
TMEM40-207ENST00000480698 ARHGAP5Q13017 1502 aa16.21■□□□□ 0.19
TMEM40-207ENST00000480698 CDC42BPBQ9Y5S2 1711 aa16.21■□□□□ 0.19
TMEM40-207ENST00000480698 ITSN2Q9NZM3 1697 aa16.2■□□□□ 0.18
TMEM40-207ENST00000480698 NEURL4Q96JN8 1562 aa16.19■□□□□ 0.18
TMEM40-207ENST00000480698 ZMYM3Q14202 1370 aa16.19■□□□□ 0.18
TMEM40-207ENST00000480698 PTPRKQ15262 1439 aa16.19■□□□□ 0.18
TMEM40-207ENST00000480698 SUPT6HQ7KZ85 1726 aaKnown RBP16.17■□□□□ 0.18
TMEM40-207ENST00000480698 PREX2Q70Z35 1606 aa16.17■□□□□ 0.18
TMEM40-207ENST00000480698 TROQ12816 1431 aaPredicted RBP16.17■□□□□ 0.18
TMEM40-207ENST00000480698 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
TMEM40-207ENST00000480698 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
TMEM40-207ENST00000480698 TOM1O60784 492 aa16.15■□□□□ 0.18
TMEM40-207ENST00000480698 ESF1Q9H501 851 aaKnown RBP16.15■□□□□ 0.18
TMEM40-207ENST00000480698 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
TMEM40-207ENST00000480698 DNMT1P26358 1616 aaKnown RBP16.14■□□□□ 0.17
TMEM40-207ENST00000480698 SHANK2Q9UPX8 1470 aa16.14■□□□□ 0.17
TMEM40-207ENST00000480698 CLTCQ00610 1675 aaKnown RBP16.14■□□□□ 0.17
TMEM40-207ENST00000480698 POLR1AO95602 1720 aaPredicted RBP16.14■□□□□ 0.17
TMEM40-207ENST00000480698 VWDEQ8N2E2 1590 aa16.13■□□□□ 0.17
TMEM40-207ENST00000480698 RGS17Q9UGC6 210 aaPredicted RBP16.13■□□□□ 0.17
TMEM40-207ENST00000480698 SAMD9LQ8IVG5 1584 aa16.12■□□□□ 0.17
TMEM40-207ENST00000480698 A2ML1A8K2U0 1454 aa16.11■□□□□ 0.17
TMEM40-207ENST00000480698 PIP4K2BP78356 416 aa16.11■□□□□ 0.17
TMEM40-207ENST00000480698 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
TMEM40-207ENST00000480698 LRRIQ1Q96JM4 1722 aa16.09■□□□□ 0.17
TMEM40-207ENST00000480698 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
TMEM40-207ENST00000480698 INO80Q9ULG1 1556 aaPredicted RBP16.06■□□□□ 0.16
TMEM40-207ENST00000480698 CLIP1P30622 1438 aa16.06■□□□□ 0.16
TMEM40-207ENST00000480698 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
TMEM40-207ENST00000480698 CDK11AQ9UQ88 783 aaPredicted RBP16.06■□□□□ 0.16
TMEM40-207ENST00000480698 MED14O60244 1454 aa16.05■□□□□ 0.16
TMEM40-207ENST00000480698 EEA1Q15075 1411 aa16.04■□□□□ 0.16
TMEM40-207ENST00000480698 MYT1LQ9UL68 1186 aa16.04■□□□□ 0.16
TMEM40-207ENST00000480698 CDC42BPAQ5VT25 1732 aa16.04■□□□□ 0.16
TMEM40-207ENST00000480698 RNF17Q9BXT8 1623 aaKnown RBP16.04■□□□□ 0.16
TMEM40-207ENST00000480698 RANGAP1P46060 587 aaPredicted RBP16.03■□□□□ 0.16
TMEM40-207ENST00000480698 DEPDC5O75140 1603 aa16.02■□□□□ 0.16
TMEM40-207ENST00000480698 SYNMO15061 1565 aa16.02■□□□□ 0.16
TMEM40-207ENST00000480698 ATP7AQ04656 1500 aa16.02■□□□□ 0.15
TMEM40-207ENST00000480698 STRCP1A6NGW2 1772 aa16.01■□□□□ 0.15
TMEM40-207ENST00000480698 A2MP01023 1474 aa16.01■□□□□ 0.15
TMEM40-207ENST00000480698 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
TMEM40-207ENST00000480698 LRRC7Q96NW7 1537 aa16■□□□□ 0.15
TMEM40-207ENST00000480698 SYCP2Q9BX26 1530 aa16■□□□□ 0.15
TMEM40-207ENST00000480698 FAM135AQ9P2D6 1515 aa15.95■□□□□ 0.14
TMEM40-207ENST00000480698 POTEAQ6S8J7 498 aa15.95■□□□□ 0.14
TMEM40-207ENST00000480698 NPHP4O75161 1426 aaPredicted RBP15.94■□□□□ 0.14
TMEM40-207ENST00000480698 KIAA1107Q9UPP5 1409 aa15.94■□□□□ 0.14
TMEM40-207ENST00000480698 PZPP20742 1482 aa15.94■□□□□ 0.14
TMEM40-207ENST00000480698 IQGAP1P46940 1657 aa15.94■□□□□ 0.14
TMEM40-207ENST00000480698 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms