RNA–Protein interactions for RNA: ENST00000480617.1

CNKSR1-205, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-205ENST00000480617 ZFYVE16Q7Z3T8 1539 aa12.67□□□□□ -0.38
CNKSR1-205ENST00000480617 ARHGEF12Q9NZN5 1544 aa12.67□□□□□ -0.38
CNKSR1-205ENST00000480617 ATP10AO60312 1499 aa12.66□□□□□ -0.38
CNKSR1-205ENST00000480617 PTPRTO14522 1441 aa12.66□□□□□ -0.38
CNKSR1-205ENST00000480617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.66□□□□□ -0.38
CNKSR1-205ENST00000480617 STRCQ7RTU9 1775 aa12.66□□□□□ -0.38
CNKSR1-205ENST00000480617 SCAPERQ9BY12 1400 aa12.65□□□□□ -0.38
CNKSR1-205ENST00000480617 SETD1BQ9UPS6 1966 aaKnown RBP12.64□□□□□ -0.39
CNKSR1-205ENST00000480617 HECW1Q76N89 1606 aa12.64□□□□□ -0.39
CNKSR1-205ENST00000480617 PLCH2O75038 1416 aa12.63□□□□□ -0.39
CNKSR1-205ENST00000480617 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
CNKSR1-205ENST00000480617 CFAP74Q9C0B2 1584 aa12.62□□□□□ -0.39
CNKSR1-205ENST00000480617 PREX1Q8TCU6 1659 aa12.61□□□□□ -0.39
CNKSR1-205ENST00000480617 EFCAB2Q5VUJ9 269 aa12.61□□□□□ -0.39
CNKSR1-205ENST00000480617 LTBP4Q8N2S1 1624 aa12.61□□□□□ -0.39
CNKSR1-205ENST00000480617 UHRF1BP1Q6BDS2 1440 aa12.61□□□□□ -0.39
CNKSR1-205ENST00000480617 FER1L4A9Z1Z3 1794 aa12.61□□□□□ -0.39
CNKSR1-205ENST00000480617 SPATA31D1Q6ZQQ2 1576 aa12.6□□□□□ -0.39
CNKSR1-205ENST00000480617 IQSEC2Q5JU85 1478 aa12.6□□□□□ -0.39
CNKSR1-205ENST00000480617 C9orf84Q5VXU9 1444 aa12.6□□□□□ -0.39
CNKSR1-205ENST00000480617 AFAP1Q8N556 730 aa12.57□□□□□ -0.4
CNKSR1-205ENST00000480617 TRAPPC8Q9Y2L5 1435 aa12.55□□□□□ -0.4
CNKSR1-205ENST00000480617 FOXD1Q16676 465 aa12.54□□□□□ -0.4
CNKSR1-205ENST00000480617 RANGAP1P46060 587 aaPredicted RBP12.52□□□□□ -0.41
CNKSR1-205ENST00000480617 NCOA1Q15788 1441 aa12.52□□□□□ -0.41
CNKSR1-205ENST00000480617 ZNF518AQ6AHZ1 1483 aa12.51□□□□□ -0.41
CNKSR1-205ENST00000480617 UBAP1LF5GYI3 381 aa12.5□□□□□ -0.41
CNKSR1-205ENST00000480617 REREQ9P2R6 1566 aa12.49□□□□□ -0.41
CNKSR1-205ENST00000480617 AGLP35573 1532 aa12.49□□□□□ -0.41
CNKSR1-205ENST00000480617 MLH3Q9UHC1 1453 aa12.49□□□□□ -0.41
CNKSR1-205ENST00000480617 KDM5CP41229 1560 aa12.48□□□□□ -0.41
CNKSR1-205ENST00000480617 CDK13Q14004 1512 aaKnown RBP12.48□□□□□ -0.41
CNKSR1-205ENST00000480617 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
CNKSR1-205ENST00000480617 CDK11AQ9UQ88 783 aaPredicted RBP12.48□□□□□ -0.41
CNKSR1-205ENST00000480617 ZNF335Q9H4Z2 1342 aaPredicted RBP12.47□□□□□ -0.41
CNKSR1-205ENST00000480617 C3P01024 1663 aa12.47□□□□□ -0.41
CNKSR1-205ENST00000480617 NCKAP5LQ9HCH0 1330 aa12.46□□□□□ -0.41
CNKSR1-205ENST00000480617 NPATQ14207 1427 aa12.45□□□□□ -0.42
CNKSR1-205ENST00000480617 CNTLNQ9NXG0 1405 aa12.45□□□□□ -0.42
CNKSR1-205ENST00000480617 DIP2CQ9Y2E4 1556 aa12.45□□□□□ -0.42
CNKSR1-205ENST00000480617 PKD2Q13563 968 aa12.45□□□□□ -0.42
CNKSR1-205ENST00000480617 MYT1LQ9UL68 1186 aa12.45□□□□□ -0.42
CNKSR1-205ENST00000480617 ZMYM3Q14202 1370 aa12.44□□□□□ -0.42
CNKSR1-205ENST00000480617 CAMSAP1Q5T5Y3 1602 aa12.42□□□□□ -0.42
CNKSR1-205ENST00000480617 TROQ12816 1431 aaPredicted RBP12.42□□□□□ -0.42
CNKSR1-205ENST00000480617 EEA1Q15075 1411 aa12.42□□□□□ -0.42
CNKSR1-205ENST00000480617 HSPA1LP34931 641 aa12.41□□□□□ -0.42
CNKSR1-205ENST00000480617 MYO5CQ9NQX4 1742 aa12.41□□□□□ -0.42
CNKSR1-205ENST00000480617 ATP1B4Q9UN42 357 aaPredicted RBP12.41□□□□□ -0.42
CNKSR1-205ENST00000480617 ARHGAP5Q13017 1502 aa12.4□□□□□ -0.42
CNKSR1-205ENST00000480617 FMN1Q68DA7 1419 aa12.39□□□□□ -0.43
CNKSR1-205ENST00000480617 ABCA6Q8N139 1617 aa12.39□□□□□ -0.43
CNKSR1-205ENST00000480617 PLA2R1Q13018 1463 aa12.39□□□□□ -0.43
CNKSR1-205ENST00000480617 TCOF1Q13428 1488 aaKnown RBP12.39□□□□□ -0.43
CNKSR1-205ENST00000480617 KIF14Q15058 1648 aa12.37□□□□□ -0.43
CNKSR1-205ENST00000480617 TOM1O60784 492 aa12.37□□□□□ -0.43
CNKSR1-205ENST00000480617 PPP6R1Q9UPN7 881 aa12.36□□□□□ -0.43
CNKSR1-205ENST00000480617 KIDINS220Q9ULH0 1771 aa12.35□□□□□ -0.43
CNKSR1-205ENST00000480617 CLIP1P30622 1438 aa12.35□□□□□ -0.43
CNKSR1-205ENST00000480617 PTPRKQ15262 1439 aa12.35□□□□□ -0.43
CNKSR1-205ENST00000480617 CDC42BPBQ9Y5S2 1711 aa12.34□□□□□ -0.43
CNKSR1-205ENST00000480617 MROH2AA6NES4 1674 aa12.34□□□□□ -0.43
CNKSR1-205ENST00000480617 MED1Q15648 1581 aaPredicted RBP12.33□□□□□ -0.44
CNKSR1-205ENST00000480617 ARHGAP35Q9NRY4 1499 aa12.33□□□□□ -0.44
CNKSR1-205ENST00000480617 ABCC1P33527 1531 aa12.32□□□□□ -0.44
CNKSR1-205ENST00000480617 PIP4K2BP78356 416 aa12.32□□□□□ -0.44
CNKSR1-205ENST00000480617 SPAG9O60271 1321 aaKnown RBP12.31□□□□□ -0.44
CNKSR1-205ENST00000480617 HNRNPMP52272 730 aaKnown RBP eCLIP12.3□□□□□ -0.44
CNKSR1-205ENST00000480617 UBTFP17480 764 aaKnown RBP12.29□□□□□ -0.44
CNKSR1-205ENST00000480617 GGT6Q6P531 493 aa12.29□□□□□ -0.44
CNKSR1-205ENST00000480617 ZNF142P52746 1687 aaPredicted RBP12.29□□□□□ -0.44
CNKSR1-205ENST00000480617 SHANK2Q9UPX8 1470 aa12.28□□□□□ -0.44
CNKSR1-205ENST00000480617 CPS1P31327 1500 aa12.28□□□□□ -0.44
CNKSR1-205ENST00000480617 SAMD9LQ8IVG5 1584 aa12.28□□□□□ -0.44
CNKSR1-205ENST00000480617 CEP170BQ9Y4F5 1589 aaPredicted RBP12.28□□□□□ -0.44
CNKSR1-205ENST00000480617 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
CNKSR1-205ENST00000480617 PREX2Q70Z35 1606 aa12.27□□□□□ -0.44
CNKSR1-205ENST00000480617 ITSN2Q9NZM3 1697 aa12.27□□□□□ -0.45
CNKSR1-205ENST00000480617 KIAA1107Q9UPP5 1409 aa12.27□□□□□ -0.45
CNKSR1-205ENST00000480617 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.45
CNKSR1-205ENST00000480617 RGS17Q9UGC6 210 aaPredicted RBP12.26□□□□□ -0.45
CNKSR1-205ENST00000480617 ZNF777Q9ULD5 760 aaPredicted RBP12.26□□□□□ -0.45
CNKSR1-205ENST00000480617 A2MP01023 1474 aa12.26□□□□□ -0.45
CNKSR1-205ENST00000480617 MYO3AQ8NEV4 1616 aa12.26□□□□□ -0.45
CNKSR1-205ENST00000480617 ANKLE2Q86XL3 938 aa12.25□□□□□ -0.45
CNKSR1-205ENST00000480617 ALKQ9UM73 1620 aa12.25□□□□□ -0.45
CNKSR1-205ENST00000480617 PLXNC1O60486 1568 aa12.24□□□□□ -0.45
CNKSR1-205ENST00000480617 DNMT1P26358 1616 aaKnown RBP12.24□□□□□ -0.45
CNKSR1-205ENST00000480617 LRRIQ1Q96JM4 1722 aa12.24□□□□□ -0.45
CNKSR1-205ENST00000480617 GPATCH8Q9UKJ3 1502 aaKnown RBP12.24□□□□□ -0.45
CNKSR1-205ENST00000480617 CLTCQ00610 1675 aaKnown RBP12.23□□□□□ -0.45
CNKSR1-205ENST00000480617 FBXO31Q5XUX0 539 aaPredicted RBP12.23□□□□□ -0.45
CNKSR1-205ENST00000480617 CASKIN1Q8WXD9 1431 aa12.22□□□□□ -0.45
CNKSR1-205ENST00000480617 THEMISQ8N1K5 641 aaPredicted RBP12.22□□□□□ -0.45
CNKSR1-205ENST00000480617 SUPT6HQ7KZ85 1726 aaKnown RBP12.22□□□□□ -0.45
CNKSR1-205ENST00000480617 NEURL4Q96JN8 1562 aa12.21□□□□□ -0.46
CNKSR1-205ENST00000480617 ATP7AQ04656 1500 aa12.21□□□□□ -0.46
CNKSR1-205ENST00000480617 MED14O60244 1454 aa12.21□□□□□ -0.46
CNKSR1-205ENST00000480617 CCDC18Q5T9S5 1454 aa12.21□□□□□ -0.46
CNKSR1-205ENST00000480617 CDC42BPAQ5VT25 1732 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms