RNA–Protein interactions for RNA: ENST00000480035.1

CNNM3-204, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 5

Gene CNNM3, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-204ENST00000480035 HNRNPUL2Q1KMD3 747 aaKnown RBP9.48□□□□□ -0.89
CNNM3-204ENST00000480035 SIGLEC1Q9BZZ2 1709 aa9.47□□□□□ -0.89
CNNM3-204ENST00000480035 ATP10AO60312 1499 aa9.46□□□□□ -0.9
CNNM3-204ENST00000480035 CFAP74Q9C0B2 1584 aa9.46□□□□□ -0.9
CNNM3-204ENST00000480035 CTTNBP2Q8WZ74 1663 aa9.45□□□□□ -0.9
CNNM3-204ENST00000480035 C9orf84Q5VXU9 1444 aa9.45□□□□□ -0.9
CNNM3-204ENST00000480035 PLEKHD1A6NEE1 506 aa9.44□□□□□ -0.9
CNNM3-204ENST00000480035 HECW1Q76N89 1606 aa9.43□□□□□ -0.9
CNNM3-204ENST00000480035 NCOA1Q15788 1441 aa9.43□□□□□ -0.9
CNNM3-204ENST00000480035 MED1Q15648 1581 aaPredicted RBP9.42□□□□□ -0.9
CNNM3-204ENST00000480035 TRAPPC8Q9Y2L5 1435 aa9.42□□□□□ -0.9
CNNM3-204ENST00000480035 P3H3Q8IVL6 736 aa9.42□□□□□ -0.9
CNNM3-204ENST00000480035 SCAPERQ9BY12 1400 aa9.41□□□□□ -0.9
CNNM3-204ENST00000480035 PHF23Q9BUL5 403 aaPredicted RBP9.41□□□□□ -0.9
CNNM3-204ENST00000480035 HSPA1LP34931 641 aa9.4□□□□□ -0.9
CNNM3-204ENST00000480035 RAPGEF6Q8TEU7 1601 aa9.4□□□□□ -0.9
CNNM3-204ENST00000480035 ZNF335Q9H4Z2 1342 aaPredicted RBP9.39□□□□□ -0.91
CNNM3-204ENST00000480035 ESF1Q9H501 851 aaKnown RBP9.39□□□□□ -0.91
CNNM3-204ENST00000480035 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.39□□□□□ -0.91
CNNM3-204ENST00000480035 NUP153P49790 1475 aaKnown RBP9.39□□□□□ -0.91
CNNM3-204ENST00000480035 TOM1O60784 492 aa9.37□□□□□ -0.91
CNNM3-204ENST00000480035 PKD2Q13563 968 aa9.37□□□□□ -0.91
CNNM3-204ENST00000480035 PLCH2O75038 1416 aa9.37□□□□□ -0.91
CNNM3-204ENST00000480035 PRXQ9BXM0 1461 aa9.36□□□□□ -0.91
CNNM3-204ENST00000480035 SCAF1Q9H7N4 1312 aaKnown RBP9.35□□□□□ -0.91
CNNM3-204ENST00000480035 CAMSAP1Q5T5Y3 1602 aa9.35□□□□□ -0.91
CNNM3-204ENST00000480035 EFCAB2Q5VUJ9 269 aa9.35□□□□□ -0.91
CNNM3-204ENST00000480035 CNTLNQ9NXG0 1405 aa9.35□□□□□ -0.91
CNNM3-204ENST00000480035 C3P01024 1663 aa9.35□□□□□ -0.91
CNNM3-204ENST00000480035 ZNF518AQ6AHZ1 1483 aa9.34□□□□□ -0.91
CNNM3-204ENST00000480035 NCKAP5LQ9HCH0 1330 aa9.34□□□□□ -0.91
CNNM3-204ENST00000480035 NPATQ14207 1427 aa9.34□□□□□ -0.91
CNNM3-204ENST00000480035 PIP4K2BP78356 416 aa9.34□□□□□ -0.91
CNNM3-204ENST00000480035 SAMD9Q5K651 1589 aa9.33□□□□□ -0.92
CNNM3-204ENST00000480035 REREQ9P2R6 1566 aa9.33□□□□□ -0.92
CNNM3-204ENST00000480035 AGLP35573 1532 aa9.33□□□□□ -0.92
CNNM3-204ENST00000480035 PLA2R1Q13018 1463 aa9.33□□□□□ -0.92
CNNM3-204ENST00000480035 AFAP1Q8N556 730 aa9.32□□□□□ -0.92
CNNM3-204ENST00000480035 MYT1LQ9UL68 1186 aa9.31□□□□□ -0.92
CNNM3-204ENST00000480035 PPP6R1Q9UPN7 881 aa9.31□□□□□ -0.92
CNNM3-204ENST00000480035 KDM5CP41229 1560 aa9.3□□□□□ -0.92
CNNM3-204ENST00000480035 TCOF1Q13428 1488 aaKnown RBP9.3□□□□□ -0.92
CNNM3-204ENST00000480035 PTPRKQ15262 1439 aa9.29□□□□□ -0.92
CNNM3-204ENST00000480035 DIP2CQ9Y2E4 1556 aa9.29□□□□□ -0.92
CNNM3-204ENST00000480035 MLH3Q9UHC1 1453 aa9.28□□□□□ -0.92
CNNM3-204ENST00000480035 ZMYM3Q14202 1370 aa9.28□□□□□ -0.92
CNNM3-204ENST00000480035 CPS1P31327 1500 aa9.28□□□□□ -0.92
CNNM3-204ENST00000480035 RGS17Q9UGC6 210 aaPredicted RBP9.26□□□□□ -0.93
CNNM3-204ENST00000480035 CDK11AQ9UQ88 783 aaPredicted RBP9.25□□□□□ -0.93
CNNM3-204ENST00000480035 MROH2AA6NES4 1674 aa9.24□□□□□ -0.93
CNNM3-204ENST00000480035 SHANK2Q9UPX8 1470 aa9.24□□□□□ -0.93
CNNM3-204ENST00000480035 ABCA6Q8N139 1617 aa9.23□□□□□ -0.93
CNNM3-204ENST00000480035 ZNF142P52746 1687 aaPredicted RBP9.23□□□□□ -0.93
CNNM3-204ENST00000480035 MYO5CQ9NQX4 1742 aa9.23□□□□□ -0.93
CNNM3-204ENST00000480035 CEP170BQ9Y4F5 1589 aaPredicted RBP9.23□□□□□ -0.93
CNNM3-204ENST00000480035 ARHGAP5Q13017 1502 aa9.22□□□□□ -0.93
CNNM3-204ENST00000480035 CDK13Q14004 1512 aaKnown RBP9.21□□□□□ -0.93
CNNM3-204ENST00000480035 MYO3AQ8NEV4 1616 aa9.21□□□□□ -0.93
CNNM3-204ENST00000480035 RANGAP1P46060 587 aaPredicted RBP9.2□□□□□ -0.94
CNNM3-204ENST00000480035 ALKQ9UM73 1620 aa9.2□□□□□ -0.94
CNNM3-204ENST00000480035 A2ML1A8K2U0 1454 aa9.19□□□□□ -0.94
CNNM3-204ENST00000480035 SUPT6HQ7KZ85 1726 aaKnown RBP9.19□□□□□ -0.94
CNNM3-204ENST00000480035 POTEAQ6S8J7 498 aa9.18□□□□□ -0.94
CNNM3-204ENST00000480035 CSRNP3Q8WYN3 585 aa9.18□□□□□ -0.94
CNNM3-204ENST00000480035 KIF14Q15058 1648 aa9.17□□□□□ -0.94
CNNM3-204ENST00000480035 TROQ12816 1431 aaPredicted RBP9.17□□□□□ -0.94
CNNM3-204ENST00000480035 ANKLE2Q86XL3 938 aa9.17□□□□□ -0.94
CNNM3-204ENST00000480035 CLIP1P30622 1438 aa9.16□□□□□ -0.94
CNNM3-204ENST00000480035 SENP3Q9H4L4 574 aaPredicted RBP9.16□□□□□ -0.94
CNNM3-204ENST00000480035 KIDINS220Q9ULH0 1771 aa9.16□□□□□ -0.94
CNNM3-204ENST00000480035 DNMT1P26358 1616 aaKnown RBP9.16□□□□□ -0.94
CNNM3-204ENST00000480035 VWDEQ8N2E2 1590 aa9.16□□□□□ -0.94
CNNM3-204ENST00000480035 ABCC1P33527 1531 aa9.15□□□□□ -0.94
CNNM3-204ENST00000480035 NEURL4Q96JN8 1562 aa9.15□□□□□ -0.95
CNNM3-204ENST00000480035 THEMISQ8N1K5 641 aaPredicted RBP9.14□□□□□ -0.95
CNNM3-204ENST00000480035 ATP1B4Q9UN42 357 aaPredicted RBP9.14□□□□□ -0.95
CNNM3-204ENST00000480035 FMN1Q68DA7 1419 aa9.14□□□□□ -0.95
CNNM3-204ENST00000480035 CLTCQ00610 1675 aaKnown RBP9.13□□□□□ -0.95
CNNM3-204ENST00000480035 SPAG9O60271 1321 aaKnown RBP9.13□□□□□ -0.95
CNNM3-204ENST00000480035 GGT6Q6P531 493 aa9.13□□□□□ -0.95
CNNM3-204ENST00000480035 POLR1AO95602 1720 aaPredicted RBP9.13□□□□□ -0.95
CNNM3-204ENST00000480035 MED14O60244 1454 aa9.13□□□□□ -0.95
CNNM3-204ENST00000480035 LRRC7Q96NW7 1537 aa9.12□□□□□ -0.95
CNNM3-204ENST00000480035 NPHP4O75161 1426 aaPredicted RBP9.12□□□□□ -0.95
CNNM3-204ENST00000480035 RNF17Q9BXT8 1623 aaKnown RBP9.12□□□□□ -0.95
CNNM3-204ENST00000480035 CDC42BPBQ9Y5S2 1711 aa9.11□□□□□ -0.95
CNNM3-204ENST00000480035 ITSN2Q9NZM3 1697 aa9.11□□□□□ -0.95
CNNM3-204ENST00000480035 UPF1Q92900 1129 aaKnown RBP eCLIP9.11□□□□□ -0.95
CNNM3-204ENST00000480035 SAMD9LQ8IVG5 1584 aa9.11□□□□□ -0.95
CNNM3-204ENST00000480035 TNRQ92752 1358 aa9.11□□□□□ -0.95
CNNM3-204ENST00000480035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.11□□□□□ -0.95
CNNM3-204ENST00000480035 A2MP01023 1474 aa9.1□□□□□ -0.95
CNNM3-204ENST00000480035 FAM135BQ49AJ0 1406 aa9.1□□□□□ -0.95
CNNM3-204ENST00000480035 PLXNC1O60486 1568 aa9.1□□□□□ -0.95
CNNM3-204ENST00000480035 DEPDC5O75140 1603 aa9.09□□□□□ -0.95
CNNM3-204ENST00000480035 PREX2Q70Z35 1606 aa9.09□□□□□ -0.95
CNNM3-204ENST00000480035 SYNMO15061 1565 aa9.09□□□□□ -0.95
CNNM3-204ENST00000480035 FAM135AQ9P2D6 1515 aa9.08□□□□□ -0.96
CNNM3-204ENST00000480035 SRCAPQ6ZRS2 3230 aa9.08□□□□□ -0.96
CNNM3-204ENST00000480035 ATP7AQ04656 1500 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms