RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 DNMBPQ6XZF7 1577 aa18.36■□□□□ 0.53
C9orf78-205ENST00000480023 KDM6BO15054 1643 aa18.36■□□□□ 0.53
C9orf78-205ENST00000480023 KIF21AQ7Z4S6 1674 aa18.36■□□□□ 0.53
C9orf78-205ENST00000480023 RPRD2Q5VT52 1461 aaKnown RBP18.35■□□□□ 0.53
C9orf78-205ENST00000480023 KIF7Q2M1P5 1343 aa18.35■□□□□ 0.53
C9orf78-205ENST00000480023 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
C9orf78-205ENST00000480023 CCDC136Q96JN2 1154 aa18.34■□□□□ 0.53
C9orf78-205ENST00000480023 MPHOSPH9Q99550 1183 aa18.32■□□□□ 0.52
C9orf78-205ENST00000480023 MIA2Q96PC5 1412 aa18.31■□□□□ 0.52
C9orf78-205ENST00000480023 DHX29Q7Z478 1369 aaKnown RBP18.31■□□□□ 0.52
C9orf78-205ENST00000480023 MAGI3Q5TCQ9 1506 aa18.31■□□□□ 0.52
C9orf78-205ENST00000480023 POLA1P09884 1462 aaPredicted RBP18.31■□□□□ 0.52
C9orf78-205ENST00000480023 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
C9orf78-205ENST00000480023 RRP7BPQ9NSQ0 103 aa18.3■□□□□ 0.52
C9orf78-205ENST00000480023 ANKRD30BQ9BXX2 1392 aa18.3■□□□□ 0.52
C9orf78-205ENST00000480023 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
C9orf78-205ENST00000480023 NBPF8Q3BBV2 869 aa18.28■□□□□ 0.52
C9orf78-205ENST00000480023 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
C9orf78-205ENST00000480023 USP35Q9P2H5 1018 aa18.26■□□□□ 0.51
C9orf78-205ENST00000480023 ANO8Q9HCE9 1232 aaPredicted RBP18.25■□□□□ 0.51
C9orf78-205ENST00000480023 ROCK1Q13464 1354 aa18.23■□□□□ 0.51
C9orf78-205ENST00000480023 CHIC2Q9UKJ5 165 aa18.22■□□□□ 0.51
C9orf78-205ENST00000480023 ARID4BQ4LE39 1312 aaPredicted RBP18.22■□□□□ 0.51
C9orf78-205ENST00000480023 MBD5Q9P267 1494 aa18.2■□□□□ 0.5
C9orf78-205ENST00000480023 TCERG1O14776 1098 aaKnown RBP18.2■□□□□ 0.5
C9orf78-205ENST00000480023 BCORL1Q5H9F3 1711 aa18.19■□□□□ 0.5
C9orf78-205ENST00000480023 WASHC2CQ9Y4E1 1318 aa18.18■□□□□ 0.5
C9orf78-205ENST00000480023 PNISRQ8TF01 805 aaKnown RBP18.18■□□□□ 0.5
C9orf78-205ENST00000480023 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
C9orf78-205ENST00000480023 IL27Q8NEV9 243 aa18.17■□□□□ 0.5
C9orf78-205ENST00000480023 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
C9orf78-205ENST00000480023 FOXD1Q16676 465 aa18.16■□□□□ 0.5
C9orf78-205ENST00000480023 MS4A1P11836 297 aa18.15■□□□□ 0.5
C9orf78-205ENST00000480023 NESP48681 1621 aa18.15■□□□□ 0.5
C9orf78-205ENST00000480023 DNMT1P26358 1616 aaKnown RBP18.14■□□□□ 0.5
C9orf78-205ENST00000480023 KIF14Q15058 1648 aa18.14■□□□□ 0.5
C9orf78-205ENST00000480023 ROCK2O75116 1388 aaKnown RBP18.14■□□□□ 0.49
C9orf78-205ENST00000480023 KDM5CP41229 1560 aa18.14■□□□□ 0.49
C9orf78-205ENST00000480023 EPRSP07814 1512 aaKnown RBP18.14■□□□□ 0.49
C9orf78-205ENST00000480023 DAPK1P53355 1430 aa18.13■□□□□ 0.49
C9orf78-205ENST00000480023 USP47Q96K76 1375 aa18.12■□□□□ 0.49
C9orf78-205ENST00000480023 PPM1GO15355 546 aaPredicted RBP18.12■□□□□ 0.49
C9orf78-205ENST00000480023 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
C9orf78-205ENST00000480023 KTN1Q86UP2 1357 aaKnown RBP18.12■□□□□ 0.49
C9orf78-205ENST00000480023 BACH2Q9BYV9 841 aa18.11■□□□□ 0.49
C9orf78-205ENST00000480023 NEFMP07197 916 aa18.11■□□□□ 0.49
C9orf78-205ENST00000480023 PDE4AP27815 886 aa18.11■□□□□ 0.49
C9orf78-205ENST00000480023 BRD4O60885 1362 aaPredicted RBP18.09■□□□□ 0.49
C9orf78-205ENST00000480023 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.49
C9orf78-205ENST00000480023 ABCC5O15440 1437 aa18.08■□□□□ 0.48
C9orf78-205ENST00000480023 PZPP20742 1482 aa18.07■□□□□ 0.48
C9orf78-205ENST00000480023 TMC1Q8TDI8 760 aa18.07■□□□□ 0.48
C9orf78-205ENST00000480023 KIF15Q9NS87 1388 aa18.07■□□□□ 0.48
C9orf78-205ENST00000480023 GAPVD1Q14C86 1478 aa18.06■□□□□ 0.48
C9orf78-205ENST00000480023 WDR62O43379 1518 aa18.06■□□□□ 0.48
C9orf78-205ENST00000480023 EXOC6Q8TAG9 804 aa18.05■□□□□ 0.48
C9orf78-205ENST00000480023 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
C9orf78-205ENST00000480023 UHRF1BP1Q6BDS2 1440 aa18.04■□□□□ 0.48
C9orf78-205ENST00000480023 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
C9orf78-205ENST00000480023 CDK13Q14004 1512 aaKnown RBP18.04■□□□□ 0.48
C9orf78-205ENST00000480023 LAS1LQ9Y4W2 734 aaKnown RBP18.04■□□□□ 0.48
C9orf78-205ENST00000480023 RALGAPBQ86X10 1494 aa18.03■□□□□ 0.48
C9orf78-205ENST00000480023 E9PCH4 1651 aa18.03■□□□□ 0.48
C9orf78-205ENST00000480023 RCAN3Q9UKA8 241 aa18.03■□□□□ 0.48
C9orf78-205ENST00000480023 PDE3BQ13370 1112 aa18.02■□□□□ 0.48
C9orf78-205ENST00000480023 MYBBP1AQ9BQG0 1328 aaKnown RBP18.02■□□□□ 0.48
C9orf78-205ENST00000480023 KIAA1107Q9UPP5 1409 aa18.02■□□□□ 0.47
C9orf78-205ENST00000480023 DDRGK1Q96HY6 314 aa18.01■□□□□ 0.47
C9orf78-205ENST00000480023 URB2Q14146 1524 aaKnown RBP18.01■□□□□ 0.47
C9orf78-205ENST00000480023 RALBP1Q15311 655 aa18.01■□□□□ 0.47
C9orf78-205ENST00000480023 RTN4Q9NQC3 1192 aaKnown RBP17.99■□□□□ 0.47
C9orf78-205ENST00000480023 TDRD9Q8NDG6 1382 aaKnown RBP17.99■□□□□ 0.47
C9orf78-205ENST00000480023 IQGAP2Q13576 1575 aa17.98■□□□□ 0.47
C9orf78-205ENST00000480023 ARHGEF12Q9NZN5 1544 aa17.98■□□□□ 0.47
C9orf78-205ENST00000480023 ZMYM4Q5VZL5 1548 aa17.97■□□□□ 0.47
C9orf78-205ENST00000480023 ADGBQ8N7X0 1667 aa17.97■□□□□ 0.47
C9orf78-205ENST00000480023 INSRP06213 1382 aa17.97■□□□□ 0.47
C9orf78-205ENST00000480023 GSE1Q14687 1217 aa17.96■□□□□ 0.47
C9orf78-205ENST00000480023 ADGRL2O95490 1459 aa17.94■□□□□ 0.46
C9orf78-205ENST00000480023 POLR3GLQ9BT43 218 aa17.93■□□□□ 0.46
C9orf78-205ENST00000480023 CNGB1Q14028 1251 aaPredicted RBP17.92■□□□□ 0.46
C9orf78-205ENST00000480023 PARD3Q8TEW0 1356 aa17.91■□□□□ 0.46
C9orf78-205ENST00000480023 SENP3-EIF4A1A0A087X0R7 540 aa17.9■□□□□ 0.46
C9orf78-205ENST00000480023 NLRP13Q86W25 1043 aa17.9■□□□□ 0.46
C9orf78-205ENST00000480023 CROCC2H7BZ55 1655 aa17.9■□□□□ 0.46
C9orf78-205ENST00000480023 NFKBIBQ15653 356 aa17.9■□□□□ 0.46
C9orf78-205ENST00000480023 UBE2Q2Q8WVN8 375 aa17.9■□□□□ 0.46
C9orf78-205ENST00000480023 BRPF3Q9ULD4 1205 aa17.89■□□□□ 0.45
C9orf78-205ENST00000480023 ZNF644Q9H582 1327 aaPredicted RBP17.88■□□□□ 0.45
C9orf78-205ENST00000480023 PLEKHH2Q8IVE3 1493 aa17.87■□□□□ 0.45
C9orf78-205ENST00000480023 BLMP54132 1417 aaPredicted RBP17.87■□□□□ 0.45
C9orf78-205ENST00000480023 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
C9orf78-205ENST00000480023 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.87■□□□□ 0.45
C9orf78-205ENST00000480023 CAMSAP2Q08AD1 1489 aa17.87■□□□□ 0.45
C9orf78-205ENST00000480023 ITSN2Q9NZM3 1697 aa17.86■□□□□ 0.45
C9orf78-205ENST00000480023 CARD11Q9BXL7 1154 aa17.86■□□□□ 0.45
C9orf78-205ENST00000480023 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
C9orf78-205ENST00000480023 PBRM1Q86U86 1689 aa17.85■□□□□ 0.45
C9orf78-205ENST00000480023 PKD2Q13563 968 aa17.84■□□□□ 0.45
C9orf78-205ENST00000480023 KDM2BQ8NHM5 1336 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms