RNA–Protein interactions for RNA: ENST00000480001.5

RARB-207, Transcript of retinoic acid receptor beta, humanhuman

TSL 3

Gene RARB, Length 1,191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-207ENST00000480001 ARHGEF12Q9NZN5 1544 aa13.32□□□□□ -0.28
RARB-207ENST00000480001 SETD1BQ9UPS6 1966 aaKnown RBP13.31□□□□□ -0.28
RARB-207ENST00000480001 CFAP74Q9C0B2 1584 aa13.31□□□□□ -0.28
RARB-207ENST00000480001 UBAP1LF5GYI3 381 aa13.3□□□□□ -0.28
RARB-207ENST00000480001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
RARB-207ENST00000480001 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
RARB-207ENST00000480001 CTTNBP2Q8WZ74 1663 aa13.29□□□□□ -0.28
RARB-207ENST00000480001 CEBPAP49715 358 aaPredicted RBP13.29□□□□□ -0.28
RARB-207ENST00000480001 ATP10AO60312 1499 aa13.27□□□□□ -0.29
RARB-207ENST00000480001 PLEKHD1A6NEE1 506 aa13.26□□□□□ -0.29
RARB-207ENST00000480001 C9orf84Q5VXU9 1444 aa13.25□□□□□ -0.29
RARB-207ENST00000480001 SIGLEC1Q9BZZ2 1709 aa13.24□□□□□ -0.29
RARB-207ENST00000480001 HECW1Q76N89 1606 aa13.23□□□□□ -0.29
RARB-207ENST00000480001 NCOA1Q15788 1441 aa13.22□□□□□ -0.29
RARB-207ENST00000480001 MED1Q15648 1581 aaPredicted RBP13.21□□□□□ -0.29
RARB-207ENST00000480001 TRAPPC8Q9Y2L5 1435 aa13.21□□□□□ -0.3
RARB-207ENST00000480001 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
RARB-207ENST00000480001 ESF1Q9H501 851 aaKnown RBP13.2□□□□□ -0.3
RARB-207ENST00000480001 SCAPERQ9BY12 1400 aa13.2□□□□□ -0.3
RARB-207ENST00000480001 RAPGEF6Q8TEU7 1601 aa13.2□□□□□ -0.3
RARB-207ENST00000480001 TOM1O60784 492 aa13.16□□□□□ -0.3
RARB-207ENST00000480001 HSPA1LP34931 641 aa13.16□□□□□ -0.3
RARB-207ENST00000480001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.16□□□□□ -0.3
RARB-207ENST00000480001 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
RARB-207ENST00000480001 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
RARB-207ENST00000480001 PKD2Q13563 968 aa13.15□□□□□ -0.3
RARB-207ENST00000480001 MSH5O43196 834 aa13.14□□□□□ -0.31
RARB-207ENST00000480001 PLCH2O75038 1416 aa13.13□□□□□ -0.31
RARB-207ENST00000480001 EFCAB2Q5VUJ9 269 aa13.13□□□□□ -0.31
RARB-207ENST00000480001 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
RARB-207ENST00000480001 PRXQ9BXM0 1461 aa13.12□□□□□ -0.31
RARB-207ENST00000480001 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
RARB-207ENST00000480001 CAMSAP1Q5T5Y3 1602 aa13.11□□□□□ -0.31
RARB-207ENST00000480001 PPP6R1Q9UPN7 881 aa13.11□□□□□ -0.31
RARB-207ENST00000480001 C3P01024 1663 aa13.11□□□□□ -0.31
RARB-207ENST00000480001 SAMD9Q5K651 1589 aa13.11□□□□□ -0.31
RARB-207ENST00000480001 REREQ9P2R6 1566 aa13.11□□□□□ -0.31
RARB-207ENST00000480001 ZNF518AQ6AHZ1 1483 aa13.1□□□□□ -0.31
RARB-207ENST00000480001 AGLP35573 1532 aa13.1□□□□□ -0.31
RARB-207ENST00000480001 NPATQ14207 1427 aa13.1□□□□□ -0.31
RARB-207ENST00000480001 NCKAP5LQ9HCH0 1330 aa13.1□□□□□ -0.31
RARB-207ENST00000480001 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
RARB-207ENST00000480001 MYT1LQ9UL68 1186 aa13.09□□□□□ -0.31
RARB-207ENST00000480001 PLA2R1Q13018 1463 aa13.09□□□□□ -0.31
RARB-207ENST00000480001 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
RARB-207ENST00000480001 AFAP1Q8N556 730 aa13.04□□□□□ -0.32
RARB-207ENST00000480001 PTPRKQ15262 1439 aa13.04□□□□□ -0.32
RARB-207ENST00000480001 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
RARB-207ENST00000480001 CPS1P31327 1500 aa13.03□□□□□ -0.32
RARB-207ENST00000480001 KDM5CP41229 1560 aa13.03□□□□□ -0.32
RARB-207ENST00000480001 ADRA2BP18089 450 aa13.03□□□□□ -0.32
RARB-207ENST00000480001 MLH3Q9UHC1 1453 aa13.03□□□□□ -0.32
RARB-207ENST00000480001 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.33
RARB-207ENST00000480001 ZMYM3Q14202 1370 aa13□□□□□ -0.33
RARB-207ENST00000480001 CDK11AQ9UQ88 783 aaPredicted RBP13□□□□□ -0.33
RARB-207ENST00000480001 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
RARB-207ENST00000480001 MYO5CQ9NQX4 1742 aa12.97□□□□□ -0.33
RARB-207ENST00000480001 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
RARB-207ENST00000480001 ZNF142P52746 1687 aaPredicted RBP12.96□□□□□ -0.34
RARB-207ENST00000480001 RGS17Q9UGC6 210 aaPredicted RBP12.95□□□□□ -0.34
RARB-207ENST00000480001 ABCA6Q8N139 1617 aa12.95□□□□□ -0.34
RARB-207ENST00000480001 CEP170BQ9Y4F5 1589 aaPredicted RBP12.94□□□□□ -0.34
RARB-207ENST00000480001 ARHGAP5Q13017 1502 aa12.94□□□□□ -0.34
RARB-207ENST00000480001 MYO3AQ8NEV4 1616 aa12.92□□□□□ -0.34
RARB-207ENST00000480001 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
RARB-207ENST00000480001 CDK13Q14004 1512 aaKnown RBP12.91□□□□□ -0.34
RARB-207ENST00000480001 RANGAP1P46060 587 aaPredicted RBP12.89□□□□□ -0.35
RARB-207ENST00000480001 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
RARB-207ENST00000480001 A2ML1A8K2U0 1454 aa12.89□□□□□ -0.35
RARB-207ENST00000480001 CLIP1P30622 1438 aa12.88□□□□□ -0.35
RARB-207ENST00000480001 KIF14Q15058 1648 aa12.88□□□□□ -0.35
RARB-207ENST00000480001 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
RARB-207ENST00000480001 TROQ12816 1431 aaPredicted RBP12.87□□□□□ -0.35
RARB-207ENST00000480001 ALKQ9UM73 1620 aa12.85□□□□□ -0.35
RARB-207ENST00000480001 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
RARB-207ENST00000480001 DNMT1P26358 1616 aaKnown RBP12.84□□□□□ -0.35
RARB-207ENST00000480001 KIDINS220Q9ULH0 1771 aa12.84□□□□□ -0.35
RARB-207ENST00000480001 ABCC1P33527 1531 aa12.84□□□□□ -0.35
RARB-207ENST00000480001 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
RARB-207ENST00000480001 VWDEQ8N2E2 1590 aa12.83□□□□□ -0.36
RARB-207ENST00000480001 THEMISQ8N1K5 641 aaPredicted RBP12.83□□□□□ -0.36
RARB-207ENST00000480001 CLTCQ00610 1675 aaKnown RBP12.83□□□□□ -0.36
RARB-207ENST00000480001 POLR1AO95602 1720 aaPredicted RBP12.82□□□□□ -0.36
RARB-207ENST00000480001 NEURL4Q96JN8 1562 aa12.82□□□□□ -0.36
RARB-207ENST00000480001 FMN1Q68DA7 1419 aa12.82□□□□□ -0.36
RARB-207ENST00000480001 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
RARB-207ENST00000480001 GGT6Q6P531 493 aa12.81□□□□□ -0.36
RARB-207ENST00000480001 ITSN2Q9NZM3 1697 aa12.8□□□□□ -0.36
RARB-207ENST00000480001 MED14O60244 1454 aa12.8□□□□□ -0.36
RARB-207ENST00000480001 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
RARB-207ENST00000480001 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
RARB-207ENST00000480001 LRRC7Q96NW7 1537 aa12.79□□□□□ -0.36
RARB-207ENST00000480001 CDC42BPBQ9Y5S2 1711 aa12.79□□□□□ -0.36
RARB-207ENST00000480001 TNRQ92752 1358 aa12.78□□□□□ -0.36
RARB-207ENST00000480001 A2MP01023 1474 aa12.78□□□□□ -0.36
RARB-207ENST00000480001 SYNMO15061 1565 aa12.77□□□□□ -0.36
RARB-207ENST00000480001 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.36
RARB-207ENST00000480001 PREX2Q70Z35 1606 aa12.77□□□□□ -0.36
RARB-207ENST00000480001 UPF1Q92900 1129 aaKnown RBP eCLIP12.76□□□□□ -0.37
RARB-207ENST00000480001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms