RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-206ENST00000479994 FER1L4A9Z1Z3 1794 aa18.13■□□□□ 0.49
HCLS1-206ENST00000479994 ABCA8O94911 1581 aa18.13■□□□□ 0.49
HCLS1-206ENST00000479994 PTPRTO14522 1441 aa18.11■□□□□ 0.49
HCLS1-206ENST00000479994 CCDC18Q5T9S5 1454 aa18.11■□□□□ 0.49
HCLS1-206ENST00000479994 POGZQ7Z3K3 1410 aa18.09■□□□□ 0.49
HCLS1-206ENST00000479994 MAP3K1Q13233 1512 aa18.08■□□□□ 0.49
HCLS1-206ENST00000479994 NEO1Q92859 1461 aa18.07■□□□□ 0.48
HCLS1-206ENST00000479994 ABCA9Q8IUA7 1624 aa18.07■□□□□ 0.48
HCLS1-206ENST00000479994 FANCAO15360 1455 aa18.07■□□□□ 0.48
HCLS1-206ENST00000479994 APLP2Q06481 763 aa18.06■□□□□ 0.48
HCLS1-206ENST00000479994 UBAP1LF5GYI3 381 aa18.04■□□□□ 0.48
HCLS1-206ENST00000479994 MLECQ14165 292 aa18.03■□□□□ 0.48
HCLS1-206ENST00000479994 RICTORQ6R327 1708 aa18.02■□□□□ 0.48
HCLS1-206ENST00000479994 LRRIQ1Q96JM4 1722 aa18.01■□□□□ 0.47
HCLS1-206ENST00000479994 NUP153P49790 1475 aaKnown RBP18.01■□□□□ 0.47
HCLS1-206ENST00000479994 CEBPAP49715 358 aaPredicted RBP18■□□□□ 0.47
HCLS1-206ENST00000479994 TIAM1Q13009 1591 aa18■□□□□ 0.47
HCLS1-206ENST00000479994 SETD1BQ9UPS6 1966 aaKnown RBP17.99■□□□□ 0.47
HCLS1-206ENST00000479994 CDK11AQ9UQ88 783 aaPredicted RBP17.99■□□□□ 0.47
HCLS1-206ENST00000479994 UHRF1BP1Q6BDS2 1440 aa17.98■□□□□ 0.47
HCLS1-206ENST00000479994 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
HCLS1-206ENST00000479994 ATP1B4Q9UN42 357 aaPredicted RBP17.96■□□□□ 0.47
HCLS1-206ENST00000479994 HSPA1LP34931 641 aa17.95■□□□□ 0.46
HCLS1-206ENST00000479994 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
HCLS1-206ENST00000479994 ARHGEF12Q9NZN5 1544 aa17.94■□□□□ 0.46
HCLS1-206ENST00000479994 DENND4BO75064 1496 aaPredicted RBP17.94■□□□□ 0.46
HCLS1-206ENST00000479994 ZFYVE16Q7Z3T8 1539 aa17.93■□□□□ 0.46
HCLS1-206ENST00000479994 EHBP1L1Q8N3D4 1523 aa17.93■□□□□ 0.46
HCLS1-206ENST00000479994 ATP10BO94823 1461 aa17.92■□□□□ 0.46
HCLS1-206ENST00000479994 ZMYM4Q5VZL5 1548 aa17.91■□□□□ 0.46
HCLS1-206ENST00000479994 ARID3CA6NKF2 412 aa17.9■□□□□ 0.46
HCLS1-206ENST00000479994 SUPT6HQ7KZ85 1726 aaKnown RBP17.89■□□□□ 0.46
HCLS1-206ENST00000479994 CDK13Q14004 1512 aaKnown RBP17.89■□□□□ 0.45
HCLS1-206ENST00000479994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
HCLS1-206ENST00000479994 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
HCLS1-206ENST00000479994 LRRC9Q6ZRR7 1453 aa17.88■□□□□ 0.45
HCLS1-206ENST00000479994 PLEKHD1A6NEE1 506 aa17.87■□□□□ 0.45
HCLS1-206ENST00000479994 ZNF335Q9H4Z2 1342 aaPredicted RBP17.87■□□□□ 0.45
HCLS1-206ENST00000479994 MTUS2Q5JR59 1369 aa17.87■□□□□ 0.45
HCLS1-206ENST00000479994 NCOA1Q15788 1441 aa17.86■□□□□ 0.45
HCLS1-206ENST00000479994 KIF14Q15058 1648 aa17.86■□□□□ 0.45
HCLS1-206ENST00000479994 TROQ12816 1431 aaPredicted RBP17.84■□□□□ 0.45
HCLS1-206ENST00000479994 MAGI2Q86UL8 1455 aa17.82■□□□□ 0.44
HCLS1-206ENST00000479994 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
HCLS1-206ENST00000479994 ITSN2Q9NZM3 1697 aa17.8■□□□□ 0.44
HCLS1-206ENST00000479994 C3P01024 1663 aa17.8■□□□□ 0.44
HCLS1-206ENST00000479994 PIP4K2BP78356 416 aa17.79■□□□□ 0.44
HCLS1-206ENST00000479994 MYO5CQ9NQX4 1742 aa17.76■□□□□ 0.43
HCLS1-206ENST00000479994 CFAP74Q9C0B2 1584 aa17.76■□□□□ 0.43
HCLS1-206ENST00000479994 CAMSAP1Q5T5Y3 1602 aa17.76■□□□□ 0.43
HCLS1-206ENST00000479994 ATP10AO60312 1499 aa17.75■□□□□ 0.43
HCLS1-206ENST00000479994 RGS17Q9UGC6 210 aaPredicted RBP17.75■□□□□ 0.43
HCLS1-206ENST00000479994 C9orf84Q5VXU9 1444 aa17.73■□□□□ 0.43
HCLS1-206ENST00000479994 NCOA2Q15596 1464 aa17.72■□□□□ 0.43
HCLS1-206ENST00000479994 NCKAP5LQ9HCH0 1330 aa17.72■□□□□ 0.43
HCLS1-206ENST00000479994 CDC42BPAQ5VT25 1732 aa17.71■□□□□ 0.43
HCLS1-206ENST00000479994 TRAPPC8Q9Y2L5 1435 aa17.71■□□□□ 0.43
HCLS1-206ENST00000479994 KANK4Q5T7N3 995 aaPredicted RBP17.7■□□□□ 0.42
HCLS1-206ENST00000479994 PREX2Q70Z35 1606 aa17.69■□□□□ 0.42
HCLS1-206ENST00000479994 TOM1O60784 492 aa17.69■□□□□ 0.42
HCLS1-206ENST00000479994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.68■□□□□ 0.42
HCLS1-206ENST00000479994 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
HCLS1-206ENST00000479994 MIA2Q96PC5 1412 aa17.66■□□□□ 0.42
HCLS1-206ENST00000479994 MYOM3Q5VTT5 1437 aa17.65■□□□□ 0.42
HCLS1-206ENST00000479994 CDC42BPBQ9Y5S2 1711 aa17.64■□□□□ 0.41
HCLS1-206ENST00000479994 SCAPERQ9BY12 1400 aa17.63■□□□□ 0.41
HCLS1-206ENST00000479994 ALKQ9UM73 1620 aa17.61■□□□□ 0.41
HCLS1-206ENST00000479994 GPATCH8Q9UKJ3 1502 aaKnown RBP17.61■□□□□ 0.41
HCLS1-206ENST00000479994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.6■□□□□ 0.41
HCLS1-206ENST00000479994 PLCH2O75038 1416 aa17.6■□□□□ 0.41
HCLS1-206ENST00000479994 PLEKHH2Q8IVE3 1493 aa17.6■□□□□ 0.41
HCLS1-206ENST00000479994 SETD1AO15047 1707 aaKnown RBP17.6■□□□□ 0.41
HCLS1-206ENST00000479994 PTPN23Q9H3S7 1636 aa17.59■□□□□ 0.41
HCLS1-206ENST00000479994 ARHGAP5Q13017 1502 aa17.59■□□□□ 0.41
HCLS1-206ENST00000479994 FGD6Q6ZV73 1430 aa17.59■□□□□ 0.41
HCLS1-206ENST00000479994 PKD2Q13563 968 aa17.58■□□□□ 0.4
HCLS1-206ENST00000479994 POTEAQ6S8J7 498 aa17.58■□□□□ 0.4
HCLS1-206ENST00000479994 TCOF1Q13428 1488 aaKnown RBP17.57■□□□□ 0.4
HCLS1-206ENST00000479994 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
HCLS1-206ENST00000479994 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
HCLS1-206ENST00000479994 PLA2R1Q13018 1463 aa17.56■□□□□ 0.4
HCLS1-206ENST00000479994 CFDP1Q9UEE9 299 aaPredicted RBP17.56■□□□□ 0.4
HCLS1-206ENST00000479994 EFCAB2Q5VUJ9 269 aa17.55■□□□□ 0.4
HCLS1-206ENST00000479994 PPARGC1BQ86YN6 1023 aaKnown RBP17.55■□□□□ 0.4
HCLS1-206ENST00000479994 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
HCLS1-206ENST00000479994 CPS1P31327 1500 aa17.55■□□□□ 0.4
HCLS1-206ENST00000479994 ESF1Q9H501 851 aaKnown RBP17.54■□□□□ 0.4
HCLS1-206ENST00000479994 SRCAPQ6ZRS2 3230 aa17.54■□□□□ 0.4
HCLS1-206ENST00000479994 PTPRKQ15262 1439 aa17.53■□□□□ 0.4
HCLS1-206ENST00000479994 ZNF142P52746 1687 aaPredicted RBP17.52■□□□□ 0.4
HCLS1-206ENST00000479994 NPATQ14207 1427 aa17.52■□□□□ 0.4
HCLS1-206ENST00000479994 REREQ9P2R6 1566 aa17.52■□□□□ 0.39
HCLS1-206ENST00000479994 DIP2CQ9Y2E4 1556 aa17.52■□□□□ 0.39
HCLS1-206ENST00000479994 RSPH4AQ5TD94 716 aa17.51■□□□□ 0.39
HCLS1-206ENST00000479994 AGLP35573 1532 aa17.51■□□□□ 0.39
HCLS1-206ENST00000479994 CAMSAP2Q08AD1 1489 aa17.5■□□□□ 0.39
HCLS1-206ENST00000479994 ARHGEF5Q12774 1597 aa17.5■□□□□ 0.39
HCLS1-206ENST00000479994 KIAA1107Q9UPP5 1409 aa17.5■□□□□ 0.39
HCLS1-206ENST00000479994 TRIM26Q12899 539 aaPredicted RBP17.5■□□□□ 0.39
HCLS1-206ENST00000479994 SAMD9LQ8IVG5 1584 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms