RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 TRIM52Q96A61 297 aa27.1■■□□□ 1.93
TNFRSF8-204ENST00000479933 JPH4Q96JJ6 628 aa27.1■■□□□ 1.93
TNFRSF8-204ENST00000479933 PLB1Q6P1J6 1458 aa27.09■■□□□ 1.93
TNFRSF8-204ENST00000479933 FBLN2P98095 1184 aa27.08■■□□□ 1.93
TNFRSF8-204ENST00000479933 DENND4BO75064 1496 aaPredicted RBP27.08■■□□□ 1.93
TNFRSF8-204ENST00000479933 KDM5BQ9UGL1 1544 aa27.08■■□□□ 1.93
TNFRSF8-204ENST00000479933 DDX10Q13206 875 aaKnown RBP27.08■■□□□ 1.93
TNFRSF8-204ENST00000479933 PRG4Q92954 1404 aaPredicted RBP27.06■■□□□ 1.92
TNFRSF8-204ENST00000479933 MPHOSPH9Q99550 1183 aa27.05■■□□□ 1.92
TNFRSF8-204ENST00000479933 ABCA8O94911 1581 aa27.02■■□□□ 1.92
TNFRSF8-204ENST00000479933 ADGBQ8N7X0 1667 aa27.02■■□□□ 1.92
TNFRSF8-204ENST00000479933 CAMSAP2Q08AD1 1489 aa27.02■■□□□ 1.92
TNFRSF8-204ENST00000479933 SUPT16HQ9Y5B9 1047 aaKnown RBP27■■□□□ 1.91
TNFRSF8-204ENST00000479933 GPATCH8Q9UKJ3 1502 aaKnown RBP27■■□□□ 1.91
TNFRSF8-204ENST00000479933 KIF14Q15058 1648 aa26.98■■□□□ 1.91
TNFRSF8-204ENST00000479933 CFDP1Q9UEE9 299 aaPredicted RBP26.98■■□□□ 1.91
TNFRSF8-204ENST00000479933 ZNF644Q9H582 1327 aaPredicted RBP26.97■■□□□ 1.91
TNFRSF8-204ENST00000479933 TSHZ2Q9NRE2 1034 aa26.97■■□□□ 1.91
TNFRSF8-204ENST00000479933 CROCC2H7BZ55 1655 aa26.97■■□□□ 1.91
TNFRSF8-204ENST00000479933 ADGRL2O95490 1459 aa26.94■■□□□ 1.9
TNFRSF8-204ENST00000479933 CCER2I3L3R5 266 aa26.93■■□□□ 1.9
TNFRSF8-204ENST00000479933 HIRIP3Q9BW71 556 aaPredicted RBP26.92■■□□□ 1.9
TNFRSF8-204ENST00000479933 ANKRD30BQ9BXX2 1392 aa26.91■■□□□ 1.9
TNFRSF8-204ENST00000479933 PLEKHD1A6NEE1 506 aa26.9■■□□□ 1.9
TNFRSF8-204ENST00000479933 ANP32CO43423 234 aa26.9■■□□□ 1.9
TNFRSF8-204ENST00000479933 RPRD2Q5VT52 1461 aaKnown RBP26.9■■□□□ 1.9
TNFRSF8-204ENST00000479933 NCOA1Q15788 1441 aa26.9■■□□□ 1.9
TNFRSF8-204ENST00000479933 ATP10BO94823 1461 aa26.88■■□□□ 1.89
TNFRSF8-204ENST00000479933 CDC42BPAQ5VT25 1732 aa26.88■■□□□ 1.89
TNFRSF8-204ENST00000479933 ABCC10Q5T3U5 1492 aa26.86■■□□□ 1.89
TNFRSF8-204ENST00000479933 ANKRD30AQ9BXX3 1397 aa26.84■■□□□ 1.89
TNFRSF8-204ENST00000479933 SHANK2Q9UPX8 1470 aa26.83■■□□□ 1.89
TNFRSF8-204ENST00000479933 SLC4A1APQ9BWU0 796 aaKnown RBP26.83■■□□□ 1.89
TNFRSF8-204ENST00000479933 KCNH8Q96L42 1107 aa26.82■■□□□ 1.88
TNFRSF8-204ENST00000479933 L3MBTL2Q969R5 705 aa26.81■■□□□ 1.88
TNFRSF8-204ENST00000479933 PZPP20742 1482 aa26.8■■□□□ 1.88
TNFRSF8-204ENST00000479933 EIF4G2P78344 907 aaKnown RBP eCLIP26.8■■□□□ 1.886e-6■■■■□ 25.1
TNFRSF8-204ENST00000479933 ZNF777Q9ULD5 760 aaPredicted RBP26.8■■□□□ 1.88
TNFRSF8-204ENST00000479933 PTPRGP23470 1445 aa26.79■■□□□ 1.88
TNFRSF8-204ENST00000479933 TEX14Q8IWB6 1497 aa26.79■■□□□ 1.88
TNFRSF8-204ENST00000479933 CHD1O14646 1710 aa26.78■■□□□ 1.88
TNFRSF8-204ENST00000479933 HSPA5P11021 654 aaKnown RBP26.77■■□□□ 1.88
TNFRSF8-204ENST00000479933 FOXD1Q16676 465 aa26.77■■□□□ 1.88
TNFRSF8-204ENST00000479933 ARHGEF5Q12774 1597 aa26.73■■□□□ 1.87
TNFRSF8-204ENST00000479933 SHROOM2Q13796 1616 aa26.73■■□□□ 1.87
TNFRSF8-204ENST00000479933 KIAA1107Q9UPP5 1409 aa26.73■■□□□ 1.87
TNFRSF8-204ENST00000479933 ANKRD50Q9ULJ7 1429 aa26.72■■□□□ 1.87
TNFRSF8-204ENST00000479933 C9orf84Q5VXU9 1444 aa26.7■■□□□ 1.87
TNFRSF8-204ENST00000479933 WASHC2AQ641Q2 1341 aa26.67■■□□□ 1.86
TNFRSF8-204ENST00000479933 PREX2Q70Z35 1606 aa26.66■■□□□ 1.86
TNFRSF8-204ENST00000479933 KDM5DQ9BY66 1539 aa26.65■■□□□ 1.86
TNFRSF8-204ENST00000479933 TSPY4P0CV99 314 aa26.65■■□□□ 1.86
TNFRSF8-204ENST00000479933 TSPY10P0CW01 314 aa26.65■■□□□ 1.86
TNFRSF8-204ENST00000479933 POLR1AO95602 1720 aaPredicted RBP26.64■■□□□ 1.85
TNFRSF8-204ENST00000479933 RSPH4AQ5TD94 716 aa26.62■■□□□ 1.85
TNFRSF8-204ENST00000479933 CNTLNQ9NXG0 1405 aa26.61■■□□□ 1.85
TNFRSF8-204ENST00000479933 NBPF8Q3BBV2 869 aa26.61■■□□□ 1.85
TNFRSF8-204ENST00000479933 CDC42BPBQ9Y5S2 1711 aa26.61■■□□□ 1.85
TNFRSF8-204ENST00000479933 MBD5Q9P267 1494 aa26.61■■□□□ 1.85
TNFRSF8-204ENST00000479933 PKD2Q13563 968 aa26.59■■□□□ 1.85
TNFRSF8-204ENST00000479933 CCDC141Q6ZP82 1450 aa26.59■■□□□ 1.85
TNFRSF8-204ENST00000479933 SAMD9LQ8IVG5 1584 aa26.58■■□□□ 1.85
TNFRSF8-204ENST00000479933 CCDC7Q96M83 1385 aa26.58■■□□□ 1.85
TNFRSF8-204ENST00000479933 SPATA31E1Q6ZUB1 1445 aa26.57■■□□□ 1.84
TNFRSF8-204ENST00000479933 NUP155O75694 1391 aa26.56■■□□□ 1.84
TNFRSF8-204ENST00000479933 KIF15Q9NS87 1388 aa26.56■■□□□ 1.84
TNFRSF8-204ENST00000479933 ABCC2Q92887 1545 aa26.55■■□□□ 1.84
TNFRSF8-204ENST00000479933 MAST1Q9Y2H9 1570 aa26.52■■□□□ 1.84
TNFRSF8-204ENST00000479933 HNRNPMP52272 730 aaKnown RBP eCLIP26.51■■□□□ 1.84
TNFRSF8-204ENST00000479933 ARHGEF12Q9NZN5 1544 aa26.51■■□□□ 1.83
TNFRSF8-204ENST00000479933 PLEKHH2Q8IVE3 1493 aa26.48■■□□□ 1.83
TNFRSF8-204ENST00000479933 MYO5CQ9NQX4 1742 aa26.48■■□□□ 1.83
TNFRSF8-204ENST00000479933 UHRF1BP1Q6BDS2 1440 aa26.48■■□□□ 1.83
TNFRSF8-204ENST00000479933 TTC37Q6PGP7 1564 aa26.48■■□□□ 1.83
TNFRSF8-204ENST00000479933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.47■■□□□ 1.83
TNFRSF8-204ENST00000479933 ARHGAP5Q13017 1502 aa26.47■■□□□ 1.83
TNFRSF8-204ENST00000479933 C11orf95C9JLR9 678 aaPredicted RBP26.45■■□□□ 1.82
TNFRSF8-204ENST00000479933 SYCP2Q9BX26 1530 aa26.43■■□□□ 1.82
TNFRSF8-204ENST00000479933 CLASP1Q7Z460 1538 aa26.42■■□□□ 1.82
TNFRSF8-204ENST00000479933 KIF7Q2M1P5 1343 aa26.42■■□□□ 1.82
TNFRSF8-204ENST00000479933 ERCC6L2Q5T890 1561 aa26.42■■□□□ 1.82
TNFRSF8-204ENST00000479933 RALGAPBQ86X10 1494 aa26.41■■□□□ 1.82
TNFRSF8-204ENST00000479933 PLXNC1O60486 1568 aa26.41■■□□□ 1.82
TNFRSF8-204ENST00000479933 UHRF1BP1LA0JNW5 1464 aa26.4■■□□□ 1.82
TNFRSF8-204ENST00000479933 ARID4BQ4LE39 1312 aaPredicted RBP26.4■■□□□ 1.82
TNFRSF8-204ENST00000479933 FAM135AQ9P2D6 1515 aa26.4■■□□□ 1.82
TNFRSF8-204ENST00000479933 UNC13BO14795 1591 aa26.39■■□□□ 1.82
TNFRSF8-204ENST00000479933 KDM5CP41229 1560 aa26.39■■□□□ 1.81
TNFRSF8-204ENST00000479933 USP47Q96K76 1375 aa26.39■■□□□ 1.81
TNFRSF8-204ENST00000479933 PRKCSHP14314 528 aaPredicted RBP26.39■■□□□ 1.81
TNFRSF8-204ENST00000479933 NEFLP07196 543 aa26.38■■□□□ 1.81
TNFRSF8-204ENST00000479933 PRKRIP1Q9H875 184 aaPredicted RBP26.38■■□□□ 1.81
TNFRSF8-204ENST00000479933 ZCCHC11Q5TAX3 1644 aaKnown RBP26.35■■□□□ 1.81
TNFRSF8-204ENST00000479933 HNRNPUQ00839 825 aaKnown RBP eCLIP26.32■■□□□ 1.8
TNFRSF8-204ENST00000479933 FKBP8Q14318 412 aa26.32■■□□□ 1.8
TNFRSF8-204ENST00000479933 ZNF326Q5BKZ1 582 aaKnown RBP26.31■■□□□ 1.8
TNFRSF8-204ENST00000479933 BCORL1Q5H9F3 1711 aa26.31■■□□□ 1.8
TNFRSF8-204ENST00000479933 PLCH2O75038 1416 aa26.31■■□□□ 1.8
TNFRSF8-204ENST00000479933 DUOX2Q9NRD8 1548 aa26.3■■□□□ 1.8
TNFRSF8-204ENST00000479933 IQGAP3Q86VI3 1631 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms