RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 SPATA31E1Q6ZUB1 1445 aa17.59■□□□□ 0.41
LYSMD4-206ENST00000479791 RRP7BPQ9NSQ0 103 aa17.58■□□□□ 0.4
LYSMD4-206ENST00000479791 MPHOSPH9Q99550 1183 aa17.58■□□□□ 0.4
LYSMD4-206ENST00000479791 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
LYSMD4-206ENST00000479791 DNMBPQ6XZF7 1577 aa17.54■□□□□ 0.4
LYSMD4-206ENST00000479791 RPRD2Q5VT52 1461 aaKnown RBP17.54■□□□□ 0.4
LYSMD4-206ENST00000479791 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
LYSMD4-206ENST00000479791 KDM6BO15054 1643 aa17.53■□□□□ 0.4
LYSMD4-206ENST00000479791 NBPF8Q3BBV2 869 aa17.52■□□□□ 0.4
LYSMD4-206ENST00000479791 TEX14Q8IWB6 1497 aa17.52■□□□□ 0.4
LYSMD4-206ENST00000479791 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
LYSMD4-206ENST00000479791 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
LYSMD4-206ENST00000479791 ANKRD30BQ9BXX2 1392 aa17.51■□□□□ 0.39
LYSMD4-206ENST00000479791 CHIC2Q9UKJ5 165 aa17.51■□□□□ 0.39
LYSMD4-206ENST00000479791 MIA2Q96PC5 1412 aa17.5■□□□□ 0.39
LYSMD4-206ENST00000479791 DHX29Q7Z478 1369 aaKnown RBP17.5■□□□□ 0.39
LYSMD4-206ENST00000479791 MAGI3Q5TCQ9 1506 aa17.49■□□□□ 0.39
LYSMD4-206ENST00000479791 KIF21AQ7Z4S6 1674 aa17.49■□□□□ 0.39
LYSMD4-206ENST00000479791 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
LYSMD4-206ENST00000479791 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
LYSMD4-206ENST00000479791 ANO8Q9HCE9 1232 aaPredicted RBP17.46■□□□□ 0.39
LYSMD4-206ENST00000479791 ARID4BQ4LE39 1312 aaPredicted RBP17.44■□□□□ 0.38
LYSMD4-206ENST00000479791 FOXD1Q16676 465 aa17.44■□□□□ 0.38
LYSMD4-206ENST00000479791 TCERG1O14776 1098 aaKnown RBP17.43■□□□□ 0.38
LYSMD4-206ENST00000479791 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
LYSMD4-206ENST00000479791 PNISRQ8TF01 805 aaKnown RBP17.42■□□□□ 0.38
LYSMD4-206ENST00000479791 IL27Q8NEV9 243 aa17.39■□□□□ 0.37
LYSMD4-206ENST00000479791 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
LYSMD4-206ENST00000479791 MS4A1P11836 297 aa17.38■□□□□ 0.37
LYSMD4-206ENST00000479791 ROCK2O75116 1388 aaKnown RBP17.37■□□□□ 0.37
LYSMD4-206ENST00000479791 WASHC2CQ9Y4E1 1318 aa17.37■□□□□ 0.37
LYSMD4-206ENST00000479791 PPM1GO15355 546 aaPredicted RBP17.36■□□□□ 0.37
LYSMD4-206ENST00000479791 LRPPRCP42704 1394 aaKnown RBP17.36■□□□□ 0.37
LYSMD4-206ENST00000479791 MBD5Q9P267 1494 aa17.36■□□□□ 0.37
LYSMD4-206ENST00000479791 NEFMP07197 916 aa17.36■□□□□ 0.37
LYSMD4-206ENST00000479791 RRP1P56182 461 aaKnown RBP17.36■□□□□ 0.37
LYSMD4-206ENST00000479791 BCORL1Q5H9F3 1711 aa17.36■□□□□ 0.37
LYSMD4-206ENST00000479791 USP47Q96K76 1375 aa17.35■□□□□ 0.37
LYSMD4-206ENST00000479791 PDE4AP27815 886 aa17.35■□□□□ 0.37
LYSMD4-206ENST00000479791 TMC1Q8TDI8 760 aa17.35■□□□□ 0.37
LYSMD4-206ENST00000479791 BACH2Q9BYV9 841 aa17.35■□□□□ 0.37
LYSMD4-206ENST00000479791 EPRSP07814 1512 aaKnown RBP17.35■□□□□ 0.37
LYSMD4-206ENST00000479791 DAPK1P53355 1430 aa17.35■□□□□ 0.37
LYSMD4-206ENST00000479791 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
LYSMD4-206ENST00000479791 NESP48681 1621 aa17.33■□□□□ 0.37
LYSMD4-206ENST00000479791 KTN1Q86UP2 1357 aaKnown RBP17.33■□□□□ 0.36
LYSMD4-206ENST00000479791 NPM2Q86SE8 214 aaKnown RBP17.32■□□□□ 0.36
LYSMD4-206ENST00000479791 DNMT1P26358 1616 aaKnown RBP17.32■□□□□ 0.36
LYSMD4-206ENST00000479791 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
LYSMD4-206ENST00000479791 KDM5CP41229 1560 aa17.31■□□□□ 0.36
LYSMD4-206ENST00000479791 KIF14Q15058 1648 aa17.3■□□□□ 0.36
LYSMD4-206ENST00000479791 KIF15Q9NS87 1388 aa17.3■□□□□ 0.36
LYSMD4-206ENST00000479791 EXOC6Q8TAG9 804 aa17.3■□□□□ 0.36
LYSMD4-206ENST00000479791 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
LYSMD4-206ENST00000479791 ABCC5O15440 1437 aa17.3■□□□□ 0.36
LYSMD4-206ENST00000479791 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
LYSMD4-206ENST00000479791 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
LYSMD4-206ENST00000479791 PZPP20742 1482 aa17.27■□□□□ 0.36
LYSMD4-206ENST00000479791 PDE3BQ13370 1112 aa17.27■□□□□ 0.35
LYSMD4-206ENST00000479791 LAMC3Q9Y6N6 1575 aa17.27■□□□□ 0.35
LYSMD4-206ENST00000479791 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.35
LYSMD4-206ENST00000479791 CNGB1Q14028 1251 aaPredicted RBP17.26■□□□□ 0.35
LYSMD4-206ENST00000479791 RALBP1Q15311 655 aa17.26■□□□□ 0.35
LYSMD4-206ENST00000479791 DDRGK1Q96HY6 314 aa17.26■□□□□ 0.35
LYSMD4-206ENST00000479791 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
LYSMD4-206ENST00000479791 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
LYSMD4-206ENST00000479791 CDK13Q14004 1512 aaKnown RBP17.26■□□□□ 0.35
LYSMD4-206ENST00000479791 RTN4Q9NQC3 1192 aaKnown RBP17.25■□□□□ 0.35
LYSMD4-206ENST00000479791 WDR62O43379 1518 aa17.24■□□□□ 0.35
LYSMD4-206ENST00000479791 UHRF1BP1Q6BDS2 1440 aa17.24■□□□□ 0.35
LYSMD4-206ENST00000479791 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
LYSMD4-206ENST00000479791 RALGAPBQ86X10 1494 aa17.23■□□□□ 0.35
LYSMD4-206ENST00000479791 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
LYSMD4-206ENST00000479791 SENP3-EIF4A1A0A087X0R7 540 aa17.21■□□□□ 0.35
LYSMD4-206ENST00000479791 GSE1Q14687 1217 aa17.21■□□□□ 0.34
LYSMD4-206ENST00000479791 IQGAP2Q13576 1575 aa17.19■□□□□ 0.34
LYSMD4-206ENST00000479791 ZNF326Q5BKZ1 582 aaKnown RBP17.18■□□□□ 0.34
LYSMD4-206ENST00000479791 E9PCH4 1651 aa17.17■□□□□ 0.34
LYSMD4-206ENST00000479791 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
LYSMD4-206ENST00000479791 ARHGEF12Q9NZN5 1544 aa17.16■□□□□ 0.34
LYSMD4-206ENST00000479791 INSRP06213 1382 aa17.16■□□□□ 0.34
LYSMD4-206ENST00000479791 ZNF644Q9H582 1327 aaPredicted RBP17.16■□□□□ 0.34
LYSMD4-206ENST00000479791 CARD11Q9BXL7 1154 aa17.15■□□□□ 0.34
LYSMD4-206ENST00000479791 NFKBIBQ15653 356 aa17.14■□□□□ 0.33
LYSMD4-206ENST00000479791 ADGBQ8N7X0 1667 aa17.14■□□□□ 0.33
LYSMD4-206ENST00000479791 ZMYM4Q5VZL5 1548 aa17.13■□□□□ 0.33
LYSMD4-206ENST00000479791 ADGRL2O95490 1459 aa17.13■□□□□ 0.33
LYSMD4-206ENST00000479791 PARD3Q8TEW0 1356 aa17.13■□□□□ 0.33
LYSMD4-206ENST00000479791 PKD2Q13563 968 aa17.13■□□□□ 0.33
LYSMD4-206ENST00000479791 BRPF3Q9ULD4 1205 aa17.12■□□□□ 0.33
LYSMD4-206ENST00000479791 ST20-MTHFSA0A0A6YYL1 179 aa17.11■□□□□ 0.33
LYSMD4-206ENST00000479791 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.11■□□□□ 0.33
LYSMD4-206ENST00000479791 CAMSAP2Q08AD1 1489 aa17.08■□□□□ 0.33
LYSMD4-206ENST00000479791 UBE2Q2Q8WVN8 375 aa17.08■□□□□ 0.33
LYSMD4-206ENST00000479791 ARID3CA6NKF2 412 aa17.08■□□□□ 0.32
LYSMD4-206ENST00000479791 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.32
LYSMD4-206ENST00000479791 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
LYSMD4-206ENST00000479791 FRAT1Q92837 279 aaPredicted RBP17.07■□□□□ 0.32
LYSMD4-206ENST00000479791 DAXXQ9UER7 740 aaPredicted RBP17.07■□□□□ 0.32
LYSMD4-206ENST00000479791 PLEKHH2Q8IVE3 1493 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms