RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 NUDCQ9Y266 331 aa28.03■■■□□ 2.08
COL13A1-208ENST00000479733 CTTNBP2Q8WZ74 1663 aa28.03■■■□□ 2.08
COL13A1-208ENST00000479733 GRIN2BQ13224 1484 aa28.01■■■□□ 2.08
COL13A1-208ENST00000479733 RTL5Q5HYW3 569 aaPredicted RBP28.01■■■□□ 2.07
COL13A1-208ENST00000479733 MAGI3Q5TCQ9 1506 aa27.98■■■□□ 2.07
COL13A1-208ENST00000479733 TOPBP1Q92547 1522 aa27.98■■■□□ 2.07
COL13A1-208ENST00000479733 NPM2Q86SE8 214 aaKnown RBP27.98■■■□□ 2.07
COL13A1-208ENST00000479733 SMG6Q86US8 1419 aaKnown RBP27.98■■■□□ 2.07
COL13A1-208ENST00000479733 SLC4A1APQ9BWU0 796 aaKnown RBP27.98■■■□□ 2.07
COL13A1-208ENST00000479733 EHBP1L1Q8N3D4 1523 aa27.97■■■□□ 2.07
COL13A1-208ENST00000479733 UGGT2Q9NYU1 1516 aa27.97■■■□□ 2.07
COL13A1-208ENST00000479733 HECW1Q76N89 1606 aa27.94■■■□□ 2.06
COL13A1-208ENST00000479733 CUL7Q14999 1698 aa27.94■■■□□ 2.06
COL13A1-208ENST00000479733 DNMBPQ6XZF7 1577 aa27.93■■■□□ 2.06
COL13A1-208ENST00000479733 ANKRD30BQ9BXX2 1392 aa27.92■■■□□ 2.06
COL13A1-208ENST00000479733 SPATA31E1Q6ZUB1 1445 aa27.89■■■□□ 2.06
COL13A1-208ENST00000479733 TMC1Q8TDI8 760 aa27.88■■■□□ 2.05
COL13A1-208ENST00000479733 SALL2Q9Y467 1007 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-208ENST00000479733 RPRD2Q5VT52 1461 aaKnown RBP27.86■■■□□ 2.05
COL13A1-208ENST00000479733 SAMD9Q5K651 1589 aa27.86■■■□□ 2.05
COL13A1-208ENST00000479733 GCC2Q8IWJ2 1684 aa27.86■■■□□ 2.05
COL13A1-208ENST00000479733 RNF123Q5XPI4 1314 aa27.86■■■□□ 2.05
COL13A1-208ENST00000479733 TCOF1Q13428 1488 aaKnown RBP27.85■■■□□ 2.05
COL13A1-208ENST00000479733 ZNF644Q9H582 1327 aaPredicted RBP27.85■■■□□ 2.05
COL13A1-208ENST00000479733 DHX29Q7Z478 1369 aaKnown RBP27.85■■■□□ 2.05
COL13A1-208ENST00000479733 LAMC3Q9Y6N6 1575 aa27.84■■■□□ 2.05
COL13A1-208ENST00000479733 ARHGEF11O15085 1522 aa27.84■■■□□ 2.05
COL13A1-208ENST00000479733 TEX14Q8IWB6 1497 aa27.83■■■□□ 2.05
COL13A1-208ENST00000479733 LAS1LQ9Y4W2 734 aaKnown RBP27.82■■■□□ 2.04
COL13A1-208ENST00000479733 PNISRQ8TF01 805 aaKnown RBP27.81■■■□□ 2.04
COL13A1-208ENST00000479733 ANO8Q9HCE9 1232 aaPredicted RBP27.81■■■□□ 2.04
COL13A1-208ENST00000479733 RTN4Q9NQC3 1192 aaKnown RBP27.8■■■□□ 2.04
COL13A1-208ENST00000479733 IL27Q8NEV9 243 aa27.78■■■□□ 2.04
COL13A1-208ENST00000479733 CDK13Q14004 1512 aaKnown RBP27.78■■■□□ 2.04
COL13A1-208ENST00000479733 EXOC6Q8TAG9 804 aa27.78■■■□□ 2.04
COL13A1-208ENST00000479733 USP47Q96K76 1375 aa27.77■■■□□ 2.04
COL13A1-208ENST00000479733 THOC2Q8NI27 1593 aaKnown RBP27.76■■■□□ 2.04
COL13A1-208ENST00000479733 GAPVD1Q14C86 1478 aa27.75■■■□□ 2.03
COL13A1-208ENST00000479733 URB2Q14146 1524 aaKnown RBP27.73■■■□□ 2.03
COL13A1-208ENST00000479733 EPRSP07814 1512 aaKnown RBP27.72■■■□□ 2.03
COL13A1-208ENST00000479733 MIA2Q96PC5 1412 aa27.72■■■□□ 2.03
COL13A1-208ENST00000479733 NEFMP07197 916 aa27.71■■■□□ 2.03
COL13A1-208ENST00000479733 DAPK1P53355 1430 aa27.69■■■□□ 2.02
COL13A1-208ENST00000479733 PDS5BQ9NTI5 1447 aa27.69■■■□□ 2.02
COL13A1-208ENST00000479733 PRKCSHP14314 528 aaPredicted RBP27.69■■■□□ 2.02
COL13A1-208ENST00000479733 RRP1P56182 461 aaKnown RBP27.68■■■□□ 2.02
COL13A1-208ENST00000479733 PDE4AP27815 886 aa27.68■■■□□ 2.02
COL13A1-208ENST00000479733 ABCC5O15440 1437 aa27.67■■■□□ 2.02
COL13A1-208ENST00000479733 KIF21AQ7Z4S6 1674 aa27.67■■■□□ 2.02
COL13A1-208ENST00000479733 ABCA5Q8WWZ7 1642 aa27.65■■■□□ 2.02
COL13A1-208ENST00000479733 RCAN3Q9UKA8 241 aa27.64■■■□□ 2.01
COL13A1-208ENST00000479733 BCORL1Q5H9F3 1711 aa27.63■■■□□ 2.01
COL13A1-208ENST00000479733 PKD2Q13563 968 aa27.63■■■□□ 2.01
COL13A1-208ENST00000479733 KDM2AQ9Y2K7 1162 aa27.63■■■□□ 2.01
COL13A1-208ENST00000479733 SKAP1Q86WV1 359 aa27.63■■■□□ 2.01
COL13A1-208ENST00000479733 CARD11Q9BXL7 1154 aa27.62■■■□□ 2.01
COL13A1-208ENST00000479733 ZNF777Q9ULD5 760 aaPredicted RBP27.62■■■□□ 2.01
COL13A1-208ENST00000479733 ROCK1Q13464 1354 aa27.61■■■□□ 2.01
COL13A1-208ENST00000479733 TCERG1O14776 1098 aaKnown RBP27.61■■■□□ 2.01
COL13A1-208ENST00000479733 POLR1AO95602 1720 aaPredicted RBP27.57■■■□□ 2
COL13A1-208ENST00000479733 ST20-MTHFSA0A0A6YYL1 179 aa27.57■■■□□ 2
COL13A1-208ENST00000479733 PLIN1O60240 522 aa27.57■■■□□ 2
COL13A1-208ENST00000479733 BACH2Q9BYV9 841 aa27.56■■■□□ 2
COL13A1-208ENST00000479733 CDCA7LQ96GN5 454 aa27.54■■■□□ 2
COL13A1-208ENST00000479733 PZPP20742 1482 aa27.54■■■□□ 2
COL13A1-208ENST00000479733 KIF15Q9NS87 1388 aa27.53■■■□□ 2
COL13A1-208ENST00000479733 MYBBP1AQ9BQG0 1328 aaKnown RBP27.53■■■□□ 2
COL13A1-208ENST00000479733 CFDP1Q9UEE9 299 aaPredicted RBP27.5■■□□□ 1.99
COL13A1-208ENST00000479733 LRPPRCP42704 1394 aaKnown RBP27.5■■□□□ 1.99
COL13A1-208ENST00000479733 ARID4BQ4LE39 1312 aaPredicted RBP27.49■■□□□ 1.99
COL13A1-208ENST00000479733 KIAA1107Q9UPP5 1409 aa27.47■■□□□ 1.99
COL13A1-208ENST00000479733 ROCK2O75116 1388 aaKnown RBP27.47■■□□□ 1.99
COL13A1-208ENST00000479733 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.46■■□□□ 1.99
COL13A1-208ENST00000479733 BRD4O60885 1362 aaPredicted RBP27.46■■□□□ 1.99
COL13A1-208ENST00000479733 MBD5Q9P267 1494 aa27.46■■□□□ 1.99
COL13A1-208ENST00000479733 RALBP1Q15311 655 aa27.45■■□□□ 1.99
COL13A1-208ENST00000479733 DNMT1P26358 1616 aaKnown RBP27.45■■□□□ 1.98
COL13A1-208ENST00000479733 SLC4A3P48751 1232 aa27.45■■□□□ 1.98
COL13A1-208ENST00000479733 WDR62O43379 1518 aa27.44■■□□□ 1.98
COL13A1-208ENST00000479733 DCAF11Q8TEB1 546 aa27.44■■□□□ 1.98
COL13A1-208ENST00000479733 USP35Q9P2H5 1018 aa27.43■■□□□ 1.98
COL13A1-208ENST00000479733 KDM5CP41229 1560 aa27.43■■□□□ 1.98
COL13A1-208ENST00000479733 PPM1GO15355 546 aaPredicted RBP27.42■■□□□ 1.98
COL13A1-208ENST00000479733 MS4A1P11836 297 aa27.42■■□□□ 1.98
COL13A1-208ENST00000479733 IQGAP2Q13576 1575 aa27.42■■□□□ 1.98
COL13A1-208ENST00000479733 CRBNQ96SW2 442 aa27.4■■□□□ 1.98
COL13A1-208ENST00000479733 NLRP13Q86W25 1043 aa27.38■■□□□ 1.97
COL13A1-208ENST00000479733 CC2D1BQ5T0F9 858 aaKnown RBP27.37■■□□□ 1.97
COL13A1-208ENST00000479733 BRPF3Q9ULD4 1205 aa27.37■■□□□ 1.97
COL13A1-208ENST00000479733 NUP155O75694 1391 aa27.36■■□□□ 1.97
COL13A1-208ENST00000479733 PRG4Q92954 1404 aaPredicted RBP27.35■■□□□ 1.97
COL13A1-208ENST00000479733 KIF14Q15058 1648 aa27.35■■□□□ 1.97
COL13A1-208ENST00000479733 PDE3BQ13370 1112 aa27.34■■□□□ 1.97
COL13A1-208ENST00000479733 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
COL13A1-208ENST00000479733 KTN1Q86UP2 1357 aaKnown RBP27.32■■□□□ 1.96
COL13A1-208ENST00000479733 CAMSAP2Q08AD1 1489 aa27.31■■□□□ 1.96
COL13A1-208ENST00000479733 TARBP1Q13395 1621 aaKnown RBP27.31■■□□□ 1.96
COL13A1-208ENST00000479733 C20orf194Q5TEA3 1177 aa27.31■■□□□ 1.96
COL13A1-208ENST00000479733 RALGAPBQ86X10 1494 aa27.3■■□□□ 1.96
COL13A1-208ENST00000479733 WASHC2CQ9Y4E1 1318 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms