RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 SCAPERQ9BY12 1400 aa29.37■■■□□ 2.29
HMGN1-212ENST00000479586 CDK13Q14004 1512 aaKnown RBP29.36■■■□□ 2.29
HMGN1-212ENST00000479586 PREX1Q8TCU6 1659 aa29.36■■■□□ 2.29
HMGN1-212ENST00000479586 PLCH2O75038 1416 aa29.33■■■□□ 2.29
HMGN1-212ENST00000479586 ATP10AO60312 1499 aa29.32■■■□□ 2.28
HMGN1-212ENST00000479586 DISP3Q9P2K9 1392 aa29.32■■■□□ 2.28
HMGN1-212ENST00000479586 ILDR2Q71H61 639 aa29.32■■■□□ 2.28
HMGN1-212ENST00000479586 C9orf84Q5VXU9 1444 aa29.31■■■□□ 2.28
HMGN1-212ENST00000479586 CEBPAP49715 358 aaPredicted RBP29.31■■■□□ 2.28
HMGN1-212ENST00000479586 STRCQ7RTU9 1775 aa29.28■■■□□ 2.28
HMGN1-212ENST00000479586 EEA1Q15075 1411 aa29.24■■■□□ 2.27
HMGN1-212ENST00000479586 MYO5CQ9NQX4 1742 aa29.22■■■□□ 2.27
HMGN1-212ENST00000479586 SOCS7O14512 581 aa29.21■■■□□ 2.27
HMGN1-212ENST00000479586 UHRF1BP1Q6BDS2 1440 aa29.2■■■□□ 2.26
HMGN1-212ENST00000479586 EFCAB2Q5VUJ9 269 aa29.19■■■□□ 2.26
HMGN1-212ENST00000479586 DMRT2Q9Y5R5 561 aa29.19■■■□□ 2.26
HMGN1-212ENST00000479586 ZNF518AQ6AHZ1 1483 aa29.16■■■□□ 2.26
HMGN1-212ENST00000479586 KIF14Q15058 1648 aa29.15■■■□□ 2.26
HMGN1-212ENST00000479586 KDM5CP41229 1560 aa29.13■■■□□ 2.25
HMGN1-212ENST00000479586 AFAP1Q8N556 730 aa29.12■■■□□ 2.25
HMGN1-212ENST00000479586 ATP1B4Q9UN42 357 aaPredicted RBP29.12■■■□□ 2.25
HMGN1-212ENST00000479586 SPATA31D1Q6ZQQ2 1576 aa29.12■■■□□ 2.25
HMGN1-212ENST00000479586 SETD1BQ9UPS6 1966 aaKnown RBP29.12■■■□□ 2.25
HMGN1-212ENST00000479586 DIP2CQ9Y2E4 1556 aa29.11■■■□□ 2.25
HMGN1-212ENST00000479586 ARHGAP5Q13017 1502 aa29.1■■■□□ 2.25
HMGN1-212ENST00000479586 PTPRTO14522 1441 aa29.08■■■□□ 2.25
HMGN1-212ENST00000479586 C3P01024 1663 aa29.08■■■□□ 2.25
HMGN1-212ENST00000479586 MYT1LQ9UL68 1186 aa29.06■■■□□ 2.24
HMGN1-212ENST00000479586 ABCA6Q8N139 1617 aa29.05■■■□□ 2.24
HMGN1-212ENST00000479586 REREQ9P2R6 1566 aa29.05■■■□□ 2.24
HMGN1-212ENST00000479586 FMN1Q68DA7 1419 aa29.04■■■□□ 2.24
HMGN1-212ENST00000479586 LTBP4Q8N2S1 1624 aa29.03■■■□□ 2.24
HMGN1-212ENST00000479586 CDK11AQ9UQ88 783 aaPredicted RBP29.03■■■□□ 2.24
HMGN1-212ENST00000479586 TROQ12816 1431 aaPredicted RBP29.03■■■□□ 2.24
HMGN1-212ENST00000479586 MLH3Q9UHC1 1453 aa28.98■■■□□ 2.23
HMGN1-212ENST00000479586 ARHGAP35Q9NRY4 1499 aa28.97■■■□□ 2.23
HMGN1-212ENST00000479586 AGLP35573 1532 aa28.96■■■□□ 2.23
HMGN1-212ENST00000479586 EHMT2Q96KQ7 1210 aa28.96■■■□□ 2.23
HMGN1-212ENST00000479586 CDC42BPBQ9Y5S2 1711 aa28.96■■■□□ 2.23
HMGN1-212ENST00000479586 CLIP1P30622 1438 aa28.95■■■□□ 2.23
HMGN1-212ENST00000479586 NCOA1Q15788 1441 aa28.95■■■□□ 2.23
HMGN1-212ENST00000479586 TRAPPC8Q9Y2L5 1435 aa28.95■■■□□ 2.23
HMGN1-212ENST00000479586 ESF1Q9H501 851 aaKnown RBP28.94■■■□□ 2.22
HMGN1-212ENST00000479586 LRRIQ1Q96JM4 1722 aa28.94■■■□□ 2.22
HMGN1-212ENST00000479586 IQSEC2Q5JU85 1478 aa28.92■■■□□ 2.22
HMGN1-212ENST00000479586 ABCC1P33527 1531 aa28.92■■■□□ 2.22
HMGN1-212ENST00000479586 UBTFP17480 764 aaKnown RBP28.9■■■□□ 2.22
HMGN1-212ENST00000479586 PREX2Q70Z35 1606 aa28.89■■■□□ 2.22
HMGN1-212ENST00000479586 ITSN2Q9NZM3 1697 aa28.89■■■□□ 2.21
HMGN1-212ENST00000479586 CNTLNQ9NXG0 1405 aa28.86■■■□□ 2.21
HMGN1-212ENST00000479586 KIDINS220Q9ULH0 1771 aa28.86■■■□□ 2.21
HMGN1-212ENST00000479586 CAMSAP1Q5T5Y3 1602 aa28.85■■■□□ 2.21
HMGN1-212ENST00000479586 NPATQ14207 1427 aa28.79■■■□□ 2.2
HMGN1-212ENST00000479586 MROH2AA6NES4 1674 aa28.78■■■□□ 2.2
HMGN1-212ENST00000479586 ZNF335Q9H4Z2 1342 aaPredicted RBP28.77■■■□□ 2.2
HMGN1-212ENST00000479586 NCKAP5LQ9HCH0 1330 aa28.76■■■□□ 2.19
HMGN1-212ENST00000479586 CDC42BPAQ5VT25 1732 aa28.75■■■□□ 2.19
HMGN1-212ENST00000479586 SAMD9LQ8IVG5 1584 aa28.75■■■□□ 2.19
HMGN1-212ENST00000479586 ZMYM3Q14202 1370 aa28.74■■■□□ 2.19
HMGN1-212ENST00000479586 UBAP1LF5GYI3 381 aa28.72■■■□□ 2.19
HMGN1-212ENST00000479586 CCDC18Q5T9S5 1454 aa28.7■■■□□ 2.18
HMGN1-212ENST00000479586 SUPT6HQ7KZ85 1726 aaKnown RBP28.69■■■□□ 2.18
HMGN1-212ENST00000479586 MYO3AQ8NEV4 1616 aa28.69■■■□□ 2.18
HMGN1-212ENST00000479586 ZNF142P52746 1687 aaPredicted RBP28.68■■■□□ 2.18
HMGN1-212ENST00000479586 SYCP2Q9BX26 1530 aa28.68■■■□□ 2.18
HMGN1-212ENST00000479586 CASKIN1Q8WXD9 1431 aa28.68■■■□□ 2.18
HMGN1-212ENST00000479586 CLTCQ00610 1675 aaKnown RBP28.67■■■□□ 2.18
HMGN1-212ENST00000479586 ZNF777Q9ULD5 760 aaPredicted RBP28.66■■■□□ 2.18
HMGN1-212ENST00000479586 PLA2R1Q13018 1463 aa28.66■■■□□ 2.18
HMGN1-212ENST00000479586 SPAG9O60271 1321 aaKnown RBP28.65■■■□□ 2.18
HMGN1-212ENST00000479586 CEP170BQ9Y4F5 1589 aaPredicted RBP28.64■■■□□ 2.18
HMGN1-212ENST00000479586 TCOF1Q13428 1488 aaKnown RBP28.64■■■□□ 2.17
HMGN1-212ENST00000479586 PKD2Q13563 968 aa28.63■■■□□ 2.17
HMGN1-212ENST00000479586 PTPRKQ15262 1439 aa28.61■■■□□ 2.17
HMGN1-212ENST00000479586 ATP7AQ04656 1500 aa28.61■■■□□ 2.17
HMGN1-212ENST00000479586 PLXNC1O60486 1568 aa28.61■■■□□ 2.17
HMGN1-212ENST00000479586 HNRNPMP52272 730 aaKnown RBP eCLIP28.6■■■□□ 2.17
HMGN1-212ENST00000479586 GPATCH8Q9UKJ3 1502 aaKnown RBP28.58■■■□□ 2.17
HMGN1-212ENST00000479586 INO80Q9ULG1 1556 aaPredicted RBP28.58■■■□□ 2.17
HMGN1-212ENST00000479586 A2MP01023 1474 aa28.57■■■□□ 2.16
HMGN1-212ENST00000479586 PPP6R1Q9UPN7 881 aa28.54■■■□□ 2.16
HMGN1-212ENST00000479586 GGT6Q6P531 493 aa28.53■■■□□ 2.16
HMGN1-212ENST00000479586 FYCO1Q9BQS8 1478 aa28.53■■■□□ 2.16
HMGN1-212ENST00000479586 KIAA1107Q9UPP5 1409 aa28.51■■■□□ 2.15
HMGN1-212ENST00000479586 MED1Q15648 1581 aaPredicted RBP28.5■■■□□ 2.15
HMGN1-212ENST00000479586 SCAF1Q9H7N4 1312 aaKnown RBP28.48■■■□□ 2.15
HMGN1-212ENST00000479586 HSPA1LP34931 641 aa28.48■■■□□ 2.15
HMGN1-212ENST00000479586 DNMT1P26358 1616 aaKnown RBP28.47■■■□□ 2.15
HMGN1-212ENST00000479586 A2ML1A8K2U0 1454 aa28.47■■■□□ 2.15
HMGN1-212ENST00000479586 PLEKHH2Q8IVE3 1493 aa28.47■■■□□ 2.15
HMGN1-212ENST00000479586 PIP4K2BP78356 416 aa28.45■■■□□ 2.14
HMGN1-212ENST00000479586 CFDP1Q9UEE9 299 aaPredicted RBP28.45■■■□□ 2.14
HMGN1-212ENST00000479586 ADGBQ8N7X0 1667 aa28.43■■■□□ 2.14
HMGN1-212ENST00000479586 NEURL4Q96JN8 1562 aa28.41■■■□□ 2.14
HMGN1-212ENST00000479586 CCNB3Q8WWL7 1395 aa28.41■■■□□ 2.14
HMGN1-212ENST00000479586 POLR1AO95602 1720 aaPredicted RBP28.4■■■□□ 2.14
HMGN1-212ENST00000479586 CPS1P31327 1500 aa28.39■■■□□ 2.14
HMGN1-212ENST00000479586 TOM1O60784 492 aa28.37■■■□□ 2.13
HMGN1-212ENST00000479586 SHANK2Q9UPX8 1470 aa28.37■■■□□ 2.13
HMGN1-212ENST00000479586 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms