RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ANKRD30BQ9BXX2 1392 aa34.42■■■■□ 3.1
SYNGAP1-206ENST00000479510 HSPA5P11021 654 aaKnown RBP34.42■■■■□ 3.1
SYNGAP1-206ENST00000479510 TROQ12816 1431 aaPredicted RBP34.39■■■■□ 3.1
SYNGAP1-206ENST00000479510 NEFLP07196 543 aa34.37■■■■□ 3.09
SYNGAP1-206ENST00000479510 WASHC2AQ641Q2 1341 aa34.37■■■■□ 3.09
SYNGAP1-206ENST00000479510 ITSN2Q9NZM3 1697 aa34.36■■■■□ 3.09
SYNGAP1-206ENST00000479510 L3MBTL2Q969R5 705 aa34.35■■■■□ 3.09
SYNGAP1-206ENST00000479510 ADCY10Q96PN6 1610 aa34.34■■■■□ 3.09
SYNGAP1-206ENST00000479510 FKBP8Q14318 412 aa34.34■■■■□ 3.09
SYNGAP1-206ENST00000479510 TSHZ2Q9NRE2 1034 aa34.33■■■■□ 3.09
SYNGAP1-206ENST00000479510 SYNJ2O15056 1496 aa34.32■■■■□ 3.08
SYNGAP1-206ENST00000479510 TEX14Q8IWB6 1497 aa34.32■■■■□ 3.08
SYNGAP1-206ENST00000479510 ARID3CA6NKF2 412 aa34.31■■■■□ 3.08
SYNGAP1-206ENST00000479510 CNTLNQ9NXG0 1405 aa34.3■■■■□ 3.08
SYNGAP1-206ENST00000479510 NCOA1Q15788 1441 aa34.29■■■■□ 3.08
SYNGAP1-206ENST00000479510 ADGBQ8N7X0 1667 aa34.28■■■■□ 3.08
SYNGAP1-206ENST00000479510 ADGRL2O95490 1459 aa34.27■■■■□ 3.08
SYNGAP1-206ENST00000479510 CAMSAP2Q08AD1 1489 aa34.27■■■■□ 3.08
SYNGAP1-206ENST00000479510 CEP170Q5SW79 1584 aa34.26■■■■□ 3.07
SYNGAP1-206ENST00000479510 CARMIL2Q6F5E8 1435 aa34.24■■■■□ 3.07
SYNGAP1-206ENST00000479510 ZNF644Q9H582 1327 aaPredicted RBP34.23■■■■□ 3.07
SYNGAP1-206ENST00000479510 GPATCH8Q9UKJ3 1502 aaKnown RBP34.23■■■■□ 3.07
SYNGAP1-206ENST00000479510 PRG4Q92954 1404 aaPredicted RBP34.23■■■■□ 3.07
SYNGAP1-206ENST00000479510 CCDC7Q96M83 1385 aa34.21■■■■□ 3.07
SYNGAP1-206ENST00000479510 NUP160Q12769 1436 aa34.21■■■■□ 3.07
SYNGAP1-206ENST00000479510 SLC4A1APQ9BWU0 796 aaKnown RBP34.21■■■■□ 3.07
SYNGAP1-206ENST00000479510 CROCC2H7BZ55 1655 aa34.19■■■■□ 3.06
SYNGAP1-206ENST00000479510 PZPP20742 1482 aa34.19■■■■□ 3.06
SYNGAP1-206ENST00000479510 CFDP1Q9UEE9 299 aaPredicted RBP34.19■■■■□ 3.06
SYNGAP1-206ENST00000479510 CHMP7Q8WUX9 453 aaPredicted RBP34.18■■■■□ 3.06
SYNGAP1-206ENST00000479510 FOXD1Q16676 465 aa34.17■■■■□ 3.06
SYNGAP1-206ENST00000479510 SPATA31E1Q6ZUB1 1445 aa34.16■■■■□ 3.06
SYNGAP1-206ENST00000479510 ERCC6Q03468 1493 aa34.16■■■■□ 3.06
SYNGAP1-206ENST00000479510 PLB1Q6P1J6 1458 aa34.16■■■■□ 3.06
SYNGAP1-206ENST00000479510 POLR1AO95602 1720 aaPredicted RBP34.16■■■■□ 3.06
SYNGAP1-206ENST00000479510 NBPF8Q3BBV2 869 aa34.11■■■■□ 3.05
SYNGAP1-206ENST00000479510 KIF14Q15058 1648 aa34.11■■■■□ 3.05
SYNGAP1-206ENST00000479510 BCANQ96GW7 911 aa34.1■■■■□ 3.05
SYNGAP1-206ENST00000479510 KIAA1107Q9UPP5 1409 aa34.1■■■■□ 3.05
SYNGAP1-206ENST00000479510 ANKRD30AQ9BXX3 1397 aa34.1■■■■□ 3.05
SYNGAP1-206ENST00000479510 MBD5Q9P267 1494 aa34.08■■■■□ 3.05
SYNGAP1-206ENST00000479510 HNRNPUQ00839 825 aaKnown RBP eCLIP34.08■■■■□ 3.05
SYNGAP1-206ENST00000479510 SHANK2Q9UPX8 1470 aa34.07■■■■□ 3.05
SYNGAP1-206ENST00000479510 ABCA8O94911 1581 aa34.05■■■■□ 3.04
SYNGAP1-206ENST00000479510 JPH4Q96JJ6 628 aa34.05■■■■□ 3.04
SYNGAP1-206ENST00000479510 PRKRIP1Q9H875 184 aaPredicted RBP34.03■■■■□ 3.04
SYNGAP1-206ENST00000479510 C11orf95C9JLR9 678 aaPredicted RBP34.03■■■■□ 3.04
SYNGAP1-206ENST00000479510 ABCC10Q5T3U5 1492 aa34■■■■□ 3.03
SYNGAP1-206ENST00000479510 ERICH6BQ5W0A0 696 aa33.97■■■■□ 3.03
SYNGAP1-206ENST00000479510 ANKRD50Q9ULJ7 1429 aa33.97■■■■□ 3.03
SYNGAP1-206ENST00000479510 KIF7Q2M1P5 1343 aa33.97■■■■□ 3.03
SYNGAP1-206ENST00000479510 PLEKHD1A6NEE1 506 aa33.95■■■■□ 3.03
SYNGAP1-206ENST00000479510 CDC42BPAQ5VT25 1732 aa33.95■■■■□ 3.03
SYNGAP1-206ENST00000479510 KDM5DQ9BY66 1539 aa33.94■■■■□ 3.02
SYNGAP1-206ENST00000479510 ARID4BQ4LE39 1312 aaPredicted RBP33.93■■■■□ 3.02
SYNGAP1-206ENST00000479510 ATP10BO94823 1461 aa33.91■■■■□ 3.02
SYNGAP1-206ENST00000479510 UHRF1BP1Q6BDS2 1440 aa33.89■■■■□ 3.02
SYNGAP1-206ENST00000479510 ZNF777Q9ULD5 760 aaPredicted RBP33.89■■■■□ 3.02
SYNGAP1-206ENST00000479510 C9orf84Q5VXU9 1444 aa33.88■■■■□ 3.01
SYNGAP1-206ENST00000479510 FBLN2P98095 1184 aa33.88■■■■□ 3.01
SYNGAP1-206ENST00000479510 PKD2Q13563 968 aa33.88■■■■□ 3.01
SYNGAP1-206ENST00000479510 ARHGEF12Q9NZN5 1544 aa33.87■■■■□ 3.01
SYNGAP1-206ENST00000479510 ARHGEF5Q12774 1597 aa33.87■■■■□ 3.01
SYNGAP1-206ENST00000479510 ZBED9Q6R2W3 1325 aa33.84■■■■□ 3.01
SYNGAP1-206ENST00000479510 MRS2Q9HD23 443 aa33.83■■■■□ 3.01
SYNGAP1-206ENST00000479510 USP47Q96K76 1375 aa33.82■■■■□ 3
SYNGAP1-206ENST00000479510 CCDC184Q52MB2 194 aa33.82■■■■□ 3
SYNGAP1-206ENST00000479510 KDM5CP41229 1560 aa33.8■■■■□ 3
SYNGAP1-206ENST00000479510 RALGAPBQ86X10 1494 aa33.8■■■■□ 3
SYNGAP1-206ENST00000479510 PTPRGP23470 1445 aa33.79■■■■□ 3
SYNGAP1-206ENST00000479510 NUP155O75694 1391 aa33.77■■■■□ 3
SYNGAP1-206ENST00000479510 TSPY4P0CV99 314 aa33.76■■■■□ 3
SYNGAP1-206ENST00000479510 TSPY10P0CW01 314 aa33.76■■■■□ 3
SYNGAP1-206ENST00000479510 ROCK2O75116 1388 aaKnown RBP33.76■■■□□ 2.99
SYNGAP1-206ENST00000479510 DHX29Q7Z478 1369 aaKnown RBP33.75■■■□□ 2.99
SYNGAP1-206ENST00000479510 BCORL1Q5H9F3 1711 aa33.73■■■□□ 2.99
SYNGAP1-206ENST00000479510 RSPH4AQ5TD94 716 aa33.71■■■□□ 2.99
SYNGAP1-206ENST00000479510 FAM9BQ8IZU0 186 aa33.7■■■□□ 2.99
SYNGAP1-206ENST00000479510 RBM19Q9Y4C8 960 aaKnown RBP33.7■■■□□ 2.99
SYNGAP1-206ENST00000479510 KIF15Q9NS87 1388 aa33.7■■■□□ 2.98
SYNGAP1-206ENST00000479510 CCDC141Q6ZP82 1450 aa33.67■■■□□ 2.98
SYNGAP1-206ENST00000479510 ANP32EQ9BTT0 268 aa33.66■■■□□ 2.98
SYNGAP1-206ENST00000479510 PREX2Q70Z35 1606 aa33.66■■■□□ 2.98
SYNGAP1-206ENST00000479510 PPP4R2Q9NY27 417 aa33.64■■■□□ 2.98
SYNGAP1-206ENST00000479510 SAMD9LQ8IVG5 1584 aa33.6■■■□□ 2.97
SYNGAP1-206ENST00000479510 MAST1Q9Y2H9 1570 aa33.58■■■□□ 2.97
SYNGAP1-206ENST00000479510 ZNF326Q5BKZ1 582 aaKnown RBP33.58■■■□□ 2.97
SYNGAP1-206ENST00000479510 CDC42BPBQ9Y5S2 1711 aa33.57■■■□□ 2.96
SYNGAP1-206ENST00000479510 KTN1Q86UP2 1357 aaKnown RBP33.57■■■□□ 2.96
SYNGAP1-206ENST00000479510 HNRNPMP52272 730 aaKnown RBP eCLIP33.55■■■□□ 2.96
SYNGAP1-206ENST00000479510 SMG6Q86US8 1419 aaKnown RBP33.55■■■□□ 2.96
SYNGAP1-206ENST00000479510 FAM135AQ9P2D6 1515 aa33.55■■■□□ 2.96
SYNGAP1-206ENST00000479510 CARD11Q9BXL7 1154 aa33.54■■■□□ 2.96
SYNGAP1-206ENST00000479510 IRX6P78412 446 aaPredicted RBP33.5■■■□□ 2.95
SYNGAP1-206ENST00000479510 UNC13BO14795 1591 aa33.49■■■□□ 2.95
SYNGAP1-206ENST00000479510 SHROOM2Q13796 1616 aa33.48■■■□□ 2.95
SYNGAP1-206ENST00000479510 PLEKHH2Q8IVE3 1493 aa33.46■■■□□ 2.95
SYNGAP1-206ENST00000479510 PLXNC1O60486 1568 aa33.43■■■□□ 2.94
SYNGAP1-206ENST00000479510 E9PCH4 1651 aa33.42■■■□□ 2.94
SYNGAP1-206ENST00000479510 FANCIQ9NVI1 1328 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms