RNA–Protein interactions for RNA: ENST00000479459.1

EPHA1-204, Transcript of EPH receptor A1, humanhuman

TSL 3

Gene EPHA1, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-204ENST00000479459 NUP153P49790 1475 aaKnown RBP22.95■■□□□ 1.26
EPHA1-204ENST00000479459 HECW1Q76N89 1606 aa22.94■■□□□ 1.26
EPHA1-204ENST00000479459 CFAP74Q9C0B2 1584 aa22.94■■□□□ 1.26
EPHA1-204ENST00000479459 IQSEC2Q5JU85 1478 aa22.94■■□□□ 1.26
EPHA1-204ENST00000479459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.93■■□□□ 1.26
EPHA1-204ENST00000479459 HNRNPUL2Q1KMD3 747 aaKnown RBP22.93■■□□□ 1.26
EPHA1-204ENST00000479459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.91■■□□□ 1.26
EPHA1-204ENST00000479459 UHRF1BP1Q6BDS2 1440 aa22.91■■□□□ 1.26
EPHA1-204ENST00000479459 SAMD9Q5K651 1589 aa22.9■■□□□ 1.26
EPHA1-204ENST00000479459 ATP10AO60312 1499 aa22.88■■□□□ 1.25
EPHA1-204ENST00000479459 PLEKHD1A6NEE1 506 aa22.86■■□□□ 1.25
EPHA1-204ENST00000479459 C9orf84Q5VXU9 1444 aa22.85■■□□□ 1.25
EPHA1-204ENST00000479459 SETD1BQ9UPS6 1966 aaKnown RBP22.85■■□□□ 1.25
EPHA1-204ENST00000479459 UBAP1LF5GYI3 381 aa22.84■■□□□ 1.25
EPHA1-204ENST00000479459 SCAPERQ9BY12 1400 aa22.83■■□□□ 1.25
EPHA1-204ENST00000479459 MED1Q15648 1581 aaPredicted RBP22.8■■□□□ 1.24
EPHA1-204ENST00000479459 PLCH2O75038 1416 aa22.77■■□□□ 1.24
EPHA1-204ENST00000479459 NCOA1Q15788 1441 aa22.76■■□□□ 1.23
EPHA1-204ENST00000479459 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
EPHA1-204ENST00000479459 TRAPPC8Q9Y2L5 1435 aa22.7■■□□□ 1.22
EPHA1-204ENST00000479459 C3P01024 1663 aa22.7■■□□□ 1.22
EPHA1-204ENST00000479459 ZNF335Q9H4Z2 1342 aaPredicted RBP22.65■■□□□ 1.22
EPHA1-204ENST00000479459 REREQ9P2R6 1566 aa22.65■■□□□ 1.22
EPHA1-204ENST00000479459 KDM5CP41229 1560 aa22.64■■□□□ 1.22
EPHA1-204ENST00000479459 SCAF1Q9H7N4 1312 aaKnown RBP22.64■■□□□ 1.22
EPHA1-204ENST00000479459 HSPA1LP34931 641 aa22.64■■□□□ 1.21
EPHA1-204ENST00000479459 ZNF518AQ6AHZ1 1483 aa22.64■■□□□ 1.21
EPHA1-204ENST00000479459 EFCAB2Q5VUJ9 269 aa22.63■■□□□ 1.21
EPHA1-204ENST00000479459 DIP2CQ9Y2E4 1556 aa22.63■■□□□ 1.21
EPHA1-204ENST00000479459 AFAP1Q8N556 730 aa22.61■■□□□ 1.21
EPHA1-204ENST00000479459 CAMSAP1Q5T5Y3 1602 aa22.6■■□□□ 1.21
EPHA1-204ENST00000479459 CDK13Q14004 1512 aaKnown RBP22.6■■□□□ 1.21
EPHA1-204ENST00000479459 AGLP35573 1532 aa22.59■■□□□ 1.21
EPHA1-204ENST00000479459 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
EPHA1-204ENST00000479459 PIP4K2BP78356 416 aa22.55■■□□□ 1.2
EPHA1-204ENST00000479459 MLH3Q9UHC1 1453 aa22.54■■□□□ 1.2
EPHA1-204ENST00000479459 ABCA6Q8N139 1617 aa22.54■■□□□ 1.2
EPHA1-204ENST00000479459 NPATQ14207 1427 aa22.54■■□□□ 1.2
EPHA1-204ENST00000479459 RANGAP1P46060 587 aaPredicted RBP22.53■■□□□ 1.2
EPHA1-204ENST00000479459 CNTLNQ9NXG0 1405 aa22.53■■□□□ 1.2
EPHA1-204ENST00000479459 MYO5CQ9NQX4 1742 aa22.53■■□□□ 1.2
EPHA1-204ENST00000479459 CSRNP3Q8WYN3 585 aa22.52■■□□□ 1.2
EPHA1-204ENST00000479459 ESF1Q9H501 851 aaKnown RBP22.52■■□□□ 1.2
EPHA1-204ENST00000479459 PLA2R1Q13018 1463 aa22.49■■□□□ 1.19
EPHA1-204ENST00000479459 TCOF1Q13428 1488 aaKnown RBP22.49■■□□□ 1.19
EPHA1-204ENST00000479459 PKD2Q13563 968 aa22.49■■□□□ 1.19
EPHA1-204ENST00000479459 MYT1LQ9UL68 1186 aa22.46■■□□□ 1.19
EPHA1-204ENST00000479459 ARHGAP5Q13017 1502 aa22.45■■□□□ 1.18
EPHA1-204ENST00000479459 KIF14Q15058 1648 aa22.45■■□□□ 1.18
EPHA1-204ENST00000479459 TOM1O60784 492 aa22.44■■□□□ 1.18
EPHA1-204ENST00000479459 ZMYM3Q14202 1370 aa22.44■■□□□ 1.18
EPHA1-204ENST00000479459 MROH2AA6NES4 1674 aa22.42■■□□□ 1.18
EPHA1-204ENST00000479459 ZNF142P52746 1687 aaPredicted RBP22.4■■□□□ 1.18
EPHA1-204ENST00000479459 PPP6R1Q9UPN7 881 aa22.39■■□□□ 1.17
EPHA1-204ENST00000479459 TROQ12816 1431 aaPredicted RBP22.38■■□□□ 1.17
EPHA1-204ENST00000479459 KIDINS220Q9ULH0 1771 aa22.38■■□□□ 1.17
EPHA1-204ENST00000479459 MYO3AQ8NEV4 1616 aa22.36■■□□□ 1.17
EPHA1-204ENST00000479459 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
EPHA1-204ENST00000479459 CEP170BQ9Y4F5 1589 aaPredicted RBP22.36■■□□□ 1.17
EPHA1-204ENST00000479459 ABCC1P33527 1531 aa22.36■■□□□ 1.17
EPHA1-204ENST00000479459 PTPRKQ15262 1439 aa22.34■■□□□ 1.17
EPHA1-204ENST00000479459 CDC42BPBQ9Y5S2 1711 aa22.34■■□□□ 1.17
EPHA1-204ENST00000479459 CPS1P31327 1500 aa22.32■■□□□ 1.16
EPHA1-204ENST00000479459 ALKQ9UM73 1620 aa22.32■■□□□ 1.16
EPHA1-204ENST00000479459 SENP3Q9H4L4 574 aaPredicted RBP22.31■■□□□ 1.16
EPHA1-204ENST00000479459 ITSN2Q9NZM3 1697 aa22.3■■□□□ 1.16
EPHA1-204ENST00000479459 SUPT6HQ7KZ85 1726 aaKnown RBP22.28■■□□□ 1.16
EPHA1-204ENST00000479459 SHANK2Q9UPX8 1470 aa22.28■■□□□ 1.16
EPHA1-204ENST00000479459 CLIP1P30622 1438 aa22.27■■□□□ 1.16
EPHA1-204ENST00000479459 FMN1Q68DA7 1419 aa22.27■■□□□ 1.16
EPHA1-204ENST00000479459 RGS17Q9UGC6 210 aaPredicted RBP22.27■■□□□ 1.16
EPHA1-204ENST00000479459 ATP1B4Q9UN42 357 aaPredicted RBP22.27■■□□□ 1.16
EPHA1-204ENST00000479459 PREX2Q70Z35 1606 aa22.26■■□□□ 1.15
EPHA1-204ENST00000479459 CLTCQ00610 1675 aaKnown RBP22.25■■□□□ 1.15
EPHA1-204ENST00000479459 SAMD9LQ8IVG5 1584 aa22.24■■□□□ 1.15
EPHA1-204ENST00000479459 NEURL4Q96JN8 1562 aa22.24■■□□□ 1.15
EPHA1-204ENST00000479459 EEA1Q15075 1411 aa22.23■■□□□ 1.15
EPHA1-204ENST00000479459 A2ML1A8K2U0 1454 aa22.23■■□□□ 1.15
EPHA1-204ENST00000479459 DNMT1P26358 1616 aaKnown RBP22.23■■□□□ 1.15
EPHA1-204ENST00000479459 PLXNC1O60486 1568 aa22.2■■□□□ 1.14
EPHA1-204ENST00000479459 VWDEQ8N2E2 1590 aa22.19■■□□□ 1.14
EPHA1-204ENST00000479459 LRRIQ1Q96JM4 1722 aa22.17■■□□□ 1.14
EPHA1-204ENST00000479459 ARHGAP35Q9NRY4 1499 aa22.16■■□□□ 1.14
EPHA1-204ENST00000479459 SPAG9O60271 1321 aaKnown RBP22.15■■□□□ 1.14
EPHA1-204ENST00000479459 POLR1AO95602 1720 aaPredicted RBP22.14■■□□□ 1.14
EPHA1-204ENST00000479459 A2MP01023 1474 aa22.14■■□□□ 1.13
EPHA1-204ENST00000479459 GGT6Q6P531 493 aa22.13■■□□□ 1.13
EPHA1-204ENST00000479459 POTEAQ6S8J7 498 aa22.13■■□□□ 1.13
EPHA1-204ENST00000479459 ATP7AQ04656 1500 aa22.11■■□□□ 1.13
EPHA1-204ENST00000479459 CDC42BPAQ5VT25 1732 aa22.11■■□□□ 1.13
EPHA1-204ENST00000479459 SYCP2Q9BX26 1530 aa22.1■■□□□ 1.13
EPHA1-204ENST00000479459 MED14O60244 1454 aa22.09■■□□□ 1.13
EPHA1-204ENST00000479459 INO80Q9ULG1 1556 aaPredicted RBP22.08■■□□□ 1.13
EPHA1-204ENST00000479459 HNRNPMP52272 730 aaKnown RBP eCLIP22.08■■□□□ 1.13
EPHA1-204ENST00000479459 SETD1AO15047 1707 aaKnown RBP22.07■■□□□ 1.12
EPHA1-204ENST00000479459 ANKLE2Q86XL3 938 aa22.07■■□□□ 1.12
EPHA1-204ENST00000479459 LRRC7Q96NW7 1537 aa22.06■■□□□ 1.12
EPHA1-204ENST00000479459 TNRQ92752 1358 aa22.05■■□□□ 1.12
EPHA1-204ENST00000479459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.05■■□□□ 1.12
EPHA1-204ENST00000479459 FBXO31Q5XUX0 539 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms