RNA–Protein interactions for RNA: ENST00000478094.1

SMS-204, Transcript of spermine synthase, humanhuman

TSL 4

Gene SMS, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-204ENST00000478094 MLECQ14165 292 aa20.27■□□□□ 0.84
SMS-204ENST00000478094 ARHGEF12Q9NZN5 1544 aa20.27■□□□□ 0.83
SMS-204ENST00000478094 DMRT2Q9Y5R5 561 aa20.26■□□□□ 0.83
SMS-204ENST00000478094 SPATA31D1Q6ZQQ2 1576 aa20.22■□□□□ 0.83
SMS-204ENST00000478094 STRCQ7RTU9 1775 aa20.22■□□□□ 0.83
SMS-204ENST00000478094 ATP10AO60312 1499 aa20.21■□□□□ 0.83
SMS-204ENST00000478094 C9orf84Q5VXU9 1444 aa20.2■□□□□ 0.82
SMS-204ENST00000478094 SCAPERQ9BY12 1400 aa20.19■□□□□ 0.82
SMS-204ENST00000478094 PLCH2O75038 1416 aa20.18■□□□□ 0.82
SMS-204ENST00000478094 UHRF1BP1Q6BDS2 1440 aa20.17■□□□□ 0.82
SMS-204ENST00000478094 CSRNP3Q8WYN3 585 aa20.16■□□□□ 0.82
SMS-204ENST00000478094 CEBPAP49715 358 aaPredicted RBP20.15■□□□□ 0.82
SMS-204ENST00000478094 PTPRTO14522 1441 aa20.14■□□□□ 0.81
SMS-204ENST00000478094 SETD1BQ9UPS6 1966 aaKnown RBP20.13■□□□□ 0.81
SMS-204ENST00000478094 IQSEC2Q5JU85 1478 aa20.11■□□□□ 0.81
SMS-204ENST00000478094 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
SMS-204ENST00000478094 CDK13Q14004 1512 aaKnown RBP20.09■□□□□ 0.81
SMS-204ENST00000478094 ZNF518AQ6AHZ1 1483 aa20.08■□□□□ 0.81
SMS-204ENST00000478094 EFCAB2Q5VUJ9 269 aa20.08■□□□□ 0.81
SMS-204ENST00000478094 MYO5CQ9NQX4 1742 aa20.07■□□□□ 0.8
SMS-204ENST00000478094 LTBP4Q8N2S1 1624 aa20.07■□□□□ 0.8
SMS-204ENST00000478094 KDM5CP41229 1560 aa20.06■□□□□ 0.8
SMS-204ENST00000478094 REREQ9P2R6 1566 aa20.05■□□□□ 0.8
SMS-204ENST00000478094 C3P01024 1663 aa20.03■□□□□ 0.8
SMS-204ENST00000478094 DIP2CQ9Y2E4 1556 aa20.02■□□□□ 0.8
SMS-204ENST00000478094 EEA1Q15075 1411 aa20.02■□□□□ 0.79
SMS-204ENST00000478094 NCOA1Q15788 1441 aa20■□□□□ 0.79
SMS-204ENST00000478094 TRAPPC8Q9Y2L5 1435 aa20■□□□□ 0.79
SMS-204ENST00000478094 AFAP1Q8N556 730 aa19.99■□□□□ 0.79
SMS-204ENST00000478094 AGLP35573 1532 aa19.98■□□□□ 0.79
SMS-204ENST00000478094 ARHGAP5Q13017 1502 aa19.97■□□□□ 0.79
SMS-204ENST00000478094 KIF14Q15058 1648 aa19.97■□□□□ 0.79
SMS-204ENST00000478094 ABCA6Q8N139 1617 aa19.96■□□□□ 0.79
SMS-204ENST00000478094 CDK11AQ9UQ88 783 aaPredicted RBP19.96■□□□□ 0.79
SMS-204ENST00000478094 MLH3Q9UHC1 1453 aa19.96■□□□□ 0.79
SMS-204ENST00000478094 ESF1Q9H501 851 aaKnown RBP19.95■□□□□ 0.78
SMS-204ENST00000478094 MYT1LQ9UL68 1186 aa19.94■□□□□ 0.78
SMS-204ENST00000478094 CNTLNQ9NXG0 1405 aa19.93■□□□□ 0.78
SMS-204ENST00000478094 FMN1Q68DA7 1419 aa19.93■□□□□ 0.78
SMS-204ENST00000478094 TROQ12816 1431 aaPredicted RBP19.92■□□□□ 0.78
SMS-204ENST00000478094 CAMSAP1Q5T5Y3 1602 aa19.9■□□□□ 0.78
SMS-204ENST00000478094 CLIP1P30622 1438 aa19.89■□□□□ 0.77
SMS-204ENST00000478094 NPATQ14207 1427 aa19.89■□□□□ 0.77
SMS-204ENST00000478094 ATP1B4Q9UN42 357 aaPredicted RBP19.88■□□□□ 0.77
SMS-204ENST00000478094 CDC42BPBQ9Y5S2 1711 aa19.87■□□□□ 0.77
SMS-204ENST00000478094 ABCC1P33527 1531 aa19.86■□□□□ 0.77
SMS-204ENST00000478094 UBAP1LF5GYI3 381 aa19.86■□□□□ 0.77
SMS-204ENST00000478094 MROH2AA6NES4 1674 aa19.86■□□□□ 0.77
SMS-204ENST00000478094 ZNF335Q9H4Z2 1342 aaPredicted RBP19.84■□□□□ 0.77
SMS-204ENST00000478094 ITSN2Q9NZM3 1697 aa19.84■□□□□ 0.77
SMS-204ENST00000478094 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
SMS-204ENST00000478094 KIDINS220Q9ULH0 1771 aa19.83■□□□□ 0.77
SMS-204ENST00000478094 PLA2R1Q13018 1463 aa19.81■□□□□ 0.76
SMS-204ENST00000478094 ARHGAP35Q9NRY4 1499 aa19.8■□□□□ 0.76
SMS-204ENST00000478094 NCKAP5LQ9HCH0 1330 aa19.8■□□□□ 0.76
SMS-204ENST00000478094 ZNF142P52746 1687 aaPredicted RBP19.8■□□□□ 0.76
SMS-204ENST00000478094 PKD2Q13563 968 aa19.79■□□□□ 0.76
SMS-204ENST00000478094 ZMYM3Q14202 1370 aa19.79■□□□□ 0.76
SMS-204ENST00000478094 LRRIQ1Q96JM4 1722 aa19.78■□□□□ 0.76
SMS-204ENST00000478094 TCOF1Q13428 1488 aaKnown RBP19.78■□□□□ 0.76
SMS-204ENST00000478094 MYO3AQ8NEV4 1616 aa19.77■□□□□ 0.76
SMS-204ENST00000478094 MED1Q15648 1581 aaPredicted RBP19.74■□□□□ 0.75
SMS-204ENST00000478094 CEP170BQ9Y4F5 1589 aaPredicted RBP19.74■□□□□ 0.75
SMS-204ENST00000478094 SAMD9LQ8IVG5 1584 aa19.74■□□□□ 0.75
SMS-204ENST00000478094 SUPT6HQ7KZ85 1726 aaKnown RBP19.73■□□□□ 0.75
SMS-204ENST00000478094 PTPRKQ15262 1439 aa19.71■□□□□ 0.75
SMS-204ENST00000478094 UBTFP17480 764 aaKnown RBP19.71■□□□□ 0.75
SMS-204ENST00000478094 CLTCQ00610 1675 aaKnown RBP19.71■□□□□ 0.75
SMS-204ENST00000478094 CDC42BPAQ5VT25 1732 aa19.71■□□□□ 0.75
SMS-204ENST00000478094 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
SMS-204ENST00000478094 CCDC18Q5T9S5 1454 aa19.7■□□□□ 0.74
SMS-204ENST00000478094 HSPA1LP34931 641 aa19.69■□□□□ 0.74
SMS-204ENST00000478094 PLXNC1O60486 1568 aa19.69■□□□□ 0.74
SMS-204ENST00000478094 SPAG9O60271 1321 aaKnown RBP19.67■□□□□ 0.74
SMS-204ENST00000478094 SYCP2Q9BX26 1530 aa19.66■□□□□ 0.74
SMS-204ENST00000478094 CPS1P31327 1500 aa19.66■□□□□ 0.74
SMS-204ENST00000478094 ATP7AQ04656 1500 aa19.66■□□□□ 0.74
SMS-204ENST00000478094 TOM1O60784 492 aa19.64■□□□□ 0.73
SMS-204ENST00000478094 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.73
SMS-204ENST00000478094 CASKIN1Q8WXD9 1431 aa19.64■□□□□ 0.73
SMS-204ENST00000478094 A2MP01023 1474 aa19.64■□□□□ 0.73
SMS-204ENST00000478094 INO80Q9ULG1 1556 aaPredicted RBP19.63■□□□□ 0.73
SMS-204ENST00000478094 A2ML1A8K2U0 1454 aa19.63■□□□□ 0.73
SMS-204ENST00000478094 PIP4K2BP78356 416 aa19.62■□□□□ 0.73
SMS-204ENST00000478094 DNMT1P26358 1616 aaKnown RBP19.62■□□□□ 0.73
SMS-204ENST00000478094 KIAA1107Q9UPP5 1409 aa19.61■□□□□ 0.73
SMS-204ENST00000478094 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
SMS-204ENST00000478094 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
SMS-204ENST00000478094 PLEKHH2Q8IVE3 1493 aa19.6■□□□□ 0.73
SMS-204ENST00000478094 POLR1AO95602 1720 aaPredicted RBP19.59■□□□□ 0.73
SMS-204ENST00000478094 HNRNPMP52272 730 aaKnown RBP eCLIP19.59■□□□□ 0.73
SMS-204ENST00000478094 GGT6Q6P531 493 aa19.59■□□□□ 0.73
SMS-204ENST00000478094 GPATCH8Q9UKJ3 1502 aaKnown RBP19.59■□□□□ 0.73
SMS-204ENST00000478094 SHANK2Q9UPX8 1470 aa19.59■□□□□ 0.73
SMS-204ENST00000478094 NEURL4Q96JN8 1562 aa19.57■□□□□ 0.72
SMS-204ENST00000478094 PHF23Q9BUL5 403 aaPredicted RBP19.57■□□□□ 0.72
SMS-204ENST00000478094 ADGBQ8N7X0 1667 aa19.56■□□□□ 0.72
SMS-204ENST00000478094 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
SMS-204ENST00000478094 ALKQ9UM73 1620 aa19.52■□□□□ 0.72
SMS-204ENST00000478094 VWDEQ8N2E2 1590 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms