RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 MLECQ14165 292 aa16.62■□□□□ 0.25
COL4A5-204ENST00000477429 CDK13Q14004 1512 aaKnown RBP16.61■□□□□ 0.25
COL4A5-204ENST00000477429 FAM9AQ8IZU1 332 aaPredicted RBP16.61■□□□□ 0.25
COL4A5-204ENST00000477429 HECW1Q76N89 1606 aa16.6■□□□□ 0.25
COL4A5-204ENST00000477429 ZFYVE16Q7Z3T8 1539 aa16.6■□□□□ 0.25
COL4A5-204ENST00000477429 DMRT2Q9Y5R5 561 aa16.57■□□□□ 0.24
COL4A5-204ENST00000477429 CEBPAP49715 358 aaPredicted RBP16.56■□□□□ 0.24
COL4A5-204ENST00000477429 SCAPERQ9BY12 1400 aa16.55■□□□□ 0.24
COL4A5-204ENST00000477429 UBAP1LF5GYI3 381 aa16.55■□□□□ 0.24
COL4A5-204ENST00000477429 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
COL4A5-204ENST00000477429 CFAP74Q9C0B2 1584 aa16.54■□□□□ 0.24
COL4A5-204ENST00000477429 EFCAB5A4FU69 1503 aa16.54■□□□□ 0.24
COL4A5-204ENST00000477429 PLCH2O75038 1416 aa16.53■□□□□ 0.24
COL4A5-204ENST00000477429 PREX1Q8TCU6 1659 aa16.53■□□□□ 0.24
COL4A5-204ENST00000477429 HSPA1LP34931 641 aa16.53■□□□□ 0.24
COL4A5-204ENST00000477429 ARHGEF12Q9NZN5 1544 aa16.53■□□□□ 0.24
COL4A5-204ENST00000477429 FER1L4A9Z1Z3 1794 aa16.52■□□□□ 0.24
COL4A5-204ENST00000477429 MAGI2Q86UL8 1455 aa16.52■□□□□ 0.23
COL4A5-204ENST00000477429 PTPRTO14522 1441 aa16.52■□□□□ 0.23
COL4A5-204ENST00000477429 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
COL4A5-204ENST00000477429 SRCAPQ6ZRS2 3230 aa16.5■□□□□ 0.23
COL4A5-204ENST00000477429 ATP10AO60312 1499 aa16.49■□□□□ 0.23
COL4A5-204ENST00000477429 KIF14Q15058 1648 aa16.48■□□□□ 0.23
COL4A5-204ENST00000477429 AFAP1Q8N556 730 aa16.47■□□□□ 0.23
COL4A5-204ENST00000477429 EEA1Q15075 1411 aa16.46■□□□□ 0.23
COL4A5-204ENST00000477429 C9orf84Q5VXU9 1444 aa16.45■□□□□ 0.22
COL4A5-204ENST00000477429 RGS17Q9UGC6 210 aaPredicted RBP16.43■□□□□ 0.22
COL4A5-204ENST00000477429 ATP1B4Q9UN42 357 aaPredicted RBP16.43■□□□□ 0.22
COL4A5-204ENST00000477429 ARHGAP35Q9NRY4 1499 aa16.42■□□□□ 0.22
COL4A5-204ENST00000477429 EFCAB2Q5VUJ9 269 aa16.42■□□□□ 0.22
COL4A5-204ENST00000477429 LRRIQ1Q96JM4 1722 aa16.4■□□□□ 0.22
COL4A5-204ENST00000477429 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
COL4A5-204ENST00000477429 KDM5CP41229 1560 aa16.4■□□□□ 0.22
COL4A5-204ENST00000477429 DIP2CQ9Y2E4 1556 aa16.4■□□□□ 0.22
COL4A5-204ENST00000477429 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
COL4A5-204ENST00000477429 ABCA6Q8N139 1617 aa16.37■□□□□ 0.21
COL4A5-204ENST00000477429 TRAPPC8Q9Y2L5 1435 aa16.37■□□□□ 0.21
COL4A5-204ENST00000477429 ZNF518AQ6AHZ1 1483 aa16.37■□□□□ 0.21
COL4A5-204ENST00000477429 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
COL4A5-204ENST00000477429 ARHGAP5Q13017 1502 aa16.36■□□□□ 0.21
COL4A5-204ENST00000477429 UHRF1BP1Q6BDS2 1440 aa16.35■□□□□ 0.21
COL4A5-204ENST00000477429 C3P01024 1663 aa16.34■□□□□ 0.21
COL4A5-204ENST00000477429 ZNF335Q9H4Z2 1342 aaPredicted RBP16.34■□□□□ 0.21
COL4A5-204ENST00000477429 FMN1Q68DA7 1419 aa16.34■□□□□ 0.21
COL4A5-204ENST00000477429 CDC42BPBQ9Y5S2 1711 aa16.33■□□□□ 0.21
COL4A5-204ENST00000477429 UBTFP17480 764 aaKnown RBP16.33■□□□□ 0.2
COL4A5-204ENST00000477429 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
COL4A5-204ENST00000477429 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
COL4A5-204ENST00000477429 REREQ9P2R6 1566 aa16.31■□□□□ 0.2
COL4A5-204ENST00000477429 MLH3Q9UHC1 1453 aa16.31■□□□□ 0.2
COL4A5-204ENST00000477429 PIP4K2BP78356 416 aa16.31■□□□□ 0.2
COL4A5-204ENST00000477429 MYT1LQ9UL68 1186 aa16.3■□□□□ 0.2
COL4A5-204ENST00000477429 ABCC1P33527 1531 aa16.29■□□□□ 0.2
COL4A5-204ENST00000477429 AGLP35573 1532 aa16.29■□□□□ 0.2
COL4A5-204ENST00000477429 CDK11AQ9UQ88 783 aaPredicted RBP16.28■□□□□ 0.2
COL4A5-204ENST00000477429 KIDINS220Q9ULH0 1771 aa16.28■□□□□ 0.2
COL4A5-204ENST00000477429 NCOA1Q15788 1441 aa16.27■□□□□ 0.19
COL4A5-204ENST00000477429 PREX2Q70Z35 1606 aa16.27■□□□□ 0.19
COL4A5-204ENST00000477429 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
COL4A5-204ENST00000477429 ITSN2Q9NZM3 1697 aa16.26■□□□□ 0.19
COL4A5-204ENST00000477429 CLIP1P30622 1438 aa16.25■□□□□ 0.19
COL4A5-204ENST00000477429 POTEAQ6S8J7 498 aa16.23■□□□□ 0.19
COL4A5-204ENST00000477429 NCKAP5LQ9HCH0 1330 aa16.22■□□□□ 0.19
COL4A5-204ENST00000477429 SAMD9LQ8IVG5 1584 aa16.21■□□□□ 0.19
COL4A5-204ENST00000477429 CAMSAP1Q5T5Y3 1602 aa16.21■□□□□ 0.19
COL4A5-204ENST00000477429 CDC42BPAQ5VT25 1732 aa16.21■□□□□ 0.19
COL4A5-204ENST00000477429 CASKIN1Q8WXD9 1431 aa16.2■□□□□ 0.18
COL4A5-204ENST00000477429 ZMYM3Q14202 1370 aa16.19■□□□□ 0.18
COL4A5-204ENST00000477429 HNRNPMP52272 730 aaKnown RBP eCLIP16.19■□□□□ 0.18
COL4A5-204ENST00000477429 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
COL4A5-204ENST00000477429 SYCP2Q9BX26 1530 aa16.18■□□□□ 0.18
COL4A5-204ENST00000477429 ALKQ9UM73 1620 aa16.17■□□□□ 0.18
COL4A5-204ENST00000477429 ESF1Q9H501 851 aaKnown RBP16.17■□□□□ 0.18
COL4A5-204ENST00000477429 GPATCH8Q9UKJ3 1502 aaKnown RBP16.16■□□□□ 0.18
COL4A5-204ENST00000477429 CNTLNQ9NXG0 1405 aa16.16■□□□□ 0.18
COL4A5-204ENST00000477429 NPATQ14207 1427 aa16.15■□□□□ 0.18
COL4A5-204ENST00000477429 SUPT6HQ7KZ85 1726 aaKnown RBP16.15■□□□□ 0.18
COL4A5-204ENST00000477429 CCDC18Q5T9S5 1454 aa16.14■□□□□ 0.17
COL4A5-204ENST00000477429 PTPRKQ15262 1439 aa16.13■□□□□ 0.17
COL4A5-204ENST00000477429 MROH2AA6NES4 1674 aa16.13■□□□□ 0.17
COL4A5-204ENST00000477429 CLTCQ00610 1675 aaKnown RBP16.13■□□□□ 0.17
COL4A5-204ENST00000477429 SPAG9O60271 1321 aaKnown RBP16.13■□□□□ 0.17
COL4A5-204ENST00000477429 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
COL4A5-204ENST00000477429 MYO3AQ8NEV4 1616 aa16.12■□□□□ 0.17
COL4A5-204ENST00000477429 TOM1O60784 492 aa16.11■□□□□ 0.17
COL4A5-204ENST00000477429 UPF1Q92900 1129 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL4A5-204ENST00000477429 TCOF1Q13428 1488 aaKnown RBP16.1■□□□□ 0.17
COL4A5-204ENST00000477429 ATP7AQ04656 1500 aa16.1■□□□□ 0.17
COL4A5-204ENST00000477429 INO80Q9ULG1 1556 aaPredicted RBP16.1■□□□□ 0.17
COL4A5-204ENST00000477429 ZNF644Q9H582 1327 aaPredicted RBP16.1■□□□□ 0.17
COL4A5-204ENST00000477429 A2MP01023 1474 aa16.09■□□□□ 0.17
COL4A5-204ENST00000477429 ZNF142P52746 1687 aaPredicted RBP16.08■□□□□ 0.17
COL4A5-204ENST00000477429 GGT6Q6P531 493 aa16.08■□□□□ 0.16
COL4A5-204ENST00000477429 FYCO1Q9BQS8 1478 aa16.08■□□□□ 0.16
COL4A5-204ENST00000477429 CEP170BQ9Y4F5 1589 aaPredicted RBP16.08■□□□□ 0.16
COL4A5-204ENST00000477429 PLA2R1Q13018 1463 aa16.06■□□□□ 0.16
COL4A5-204ENST00000477429 KIAA1107Q9UPP5 1409 aa16.06■□□□□ 0.16
COL4A5-204ENST00000477429 FBXO31Q5XUX0 539 aaPredicted RBP16.04■□□□□ 0.16
COL4A5-204ENST00000477429 CFDP1Q9UEE9 299 aaPredicted RBP16.04■□□□□ 0.16
COL4A5-204ENST00000477429 PKD2Q13563 968 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms