RNA–Protein interactions for RNA: ENST00000477008.1

SEC24C-204, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 2

Gene SEC24C, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-204ENST00000477008 ZFYVE16Q7Z3T8 1539 aa12.52□□□□□ -0.4
SEC24C-204ENST00000477008 TTC37Q6PGP7 1564 aa12.52□□□□□ -0.4
SEC24C-204ENST00000477008 SETD1BQ9UPS6 1966 aaKnown RBP12.52□□□□□ -0.41
SEC24C-204ENST00000477008 PTPRTO14522 1441 aa12.52□□□□□ -0.41
SEC24C-204ENST00000477008 UHRF1BP1Q6BDS2 1440 aa12.52□□□□□ -0.41
SEC24C-204ENST00000477008 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
SEC24C-204ENST00000477008 FER1L4A9Z1Z3 1794 aa12.51□□□□□ -0.41
SEC24C-204ENST00000477008 CFAP74Q9C0B2 1584 aa12.51□□□□□ -0.41
SEC24C-204ENST00000477008 IQSEC2Q5JU85 1478 aa12.5□□□□□ -0.41
SEC24C-204ENST00000477008 ZMYM4Q5VZL5 1548 aa12.5□□□□□ -0.41
SEC24C-204ENST00000477008 RAPGEF6Q8TEU7 1601 aa12.49□□□□□ -0.41
SEC24C-204ENST00000477008 STRCQ7RTU9 1775 aa12.48□□□□□ -0.41
SEC24C-204ENST00000477008 ATP10AO60312 1499 aa12.48□□□□□ -0.41
SEC24C-204ENST00000477008 PRXQ9BXM0 1461 aa12.47□□□□□ -0.41
SEC24C-204ENST00000477008 ESF1Q9H501 851 aaKnown RBP12.47□□□□□ -0.41
SEC24C-204ENST00000477008 ARHGEF12Q9NZN5 1544 aa12.47□□□□□ -0.41
SEC24C-204ENST00000477008 SCAPERQ9BY12 1400 aa12.46□□□□□ -0.41
SEC24C-204ENST00000477008 C9orf84Q5VXU9 1444 aa12.45□□□□□ -0.42
SEC24C-204ENST00000477008 HECW1Q76N89 1606 aa12.45□□□□□ -0.42
SEC24C-204ENST00000477008 UBAP1LF5GYI3 381 aa12.45□□□□□ -0.42
SEC24C-204ENST00000477008 MYT1LQ9UL68 1186 aa12.45□□□□□ -0.42
SEC24C-204ENST00000477008 SIGLEC1Q9BZZ2 1709 aa12.44□□□□□ -0.42
SEC24C-204ENST00000477008 NUP153P49790 1475 aaKnown RBP12.44□□□□□ -0.42
SEC24C-204ENST00000477008 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.43□□□□□ -0.42
SEC24C-204ENST00000477008 EFCAB2Q5VUJ9 269 aa12.43□□□□□ -0.42
SEC24C-204ENST00000477008 LTBP4Q8N2S1 1624 aa12.43□□□□□ -0.42
SEC24C-204ENST00000477008 PLCH2O75038 1416 aa12.41□□□□□ -0.42
SEC24C-204ENST00000477008 TRAPPC8Q9Y2L5 1435 aa12.4□□□□□ -0.42
SEC24C-204ENST00000477008 RANGAP1P46060 587 aaPredicted RBP12.4□□□□□ -0.42
SEC24C-204ENST00000477008 SAMD9Q5K651 1589 aa12.39□□□□□ -0.43
SEC24C-204ENST00000477008 NCOA1Q15788 1441 aa12.37□□□□□ -0.43
SEC24C-204ENST00000477008 AFAP1Q8N556 730 aa12.36□□□□□ -0.43
SEC24C-204ENST00000477008 CSRNP3Q8WYN3 585 aa12.36□□□□□ -0.43
SEC24C-204ENST00000477008 CDK11AQ9UQ88 783 aaPredicted RBP12.35□□□□□ -0.43
SEC24C-204ENST00000477008 ZNF335Q9H4Z2 1342 aaPredicted RBP12.35□□□□□ -0.43
SEC24C-204ENST00000477008 ZNF518AQ6AHZ1 1483 aa12.34□□□□□ -0.43
SEC24C-204ENST00000477008 PKD2Q13563 968 aa12.34□□□□□ -0.43
SEC24C-204ENST00000477008 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
SEC24C-204ENST00000477008 TOM1O60784 492 aa12.33□□□□□ -0.44
SEC24C-204ENST00000477008 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
SEC24C-204ENST00000477008 CNTLNQ9NXG0 1405 aa12.32□□□□□ -0.44
SEC24C-204ENST00000477008 HSPA1LP34931 641 aa12.31□□□□□ -0.44
SEC24C-204ENST00000477008 ATP1B4Q9UN42 357 aaPredicted RBP12.31□□□□□ -0.44
SEC24C-204ENST00000477008 C3P01024 1663 aa12.31□□□□□ -0.44
SEC24C-204ENST00000477008 PIP4K2BP78356 416 aa12.3□□□□□ -0.44
SEC24C-204ENST00000477008 CAMSAP1Q5T5Y3 1602 aa12.29□□□□□ -0.44
SEC24C-204ENST00000477008 AGLP35573 1532 aa12.28□□□□□ -0.44
SEC24C-204ENST00000477008 REREQ9P2R6 1566 aa12.28□□□□□ -0.44
SEC24C-204ENST00000477008 NPATQ14207 1427 aa12.28□□□□□ -0.44
SEC24C-204ENST00000477008 ZMYM3Q14202 1370 aa12.27□□□□□ -0.45
SEC24C-204ENST00000477008 MLH3Q9UHC1 1453 aa12.27□□□□□ -0.45
SEC24C-204ENST00000477008 KDM5CP41229 1560 aa12.26□□□□□ -0.45
SEC24C-204ENST00000477008 MED1Q15648 1581 aaPredicted RBP12.26□□□□□ -0.45
SEC24C-204ENST00000477008 MYO5CQ9NQX4 1742 aa12.26□□□□□ -0.45
SEC24C-204ENST00000477008 ARHGAP5Q13017 1502 aa12.25□□□□□ -0.45
SEC24C-204ENST00000477008 CDK13Q14004 1512 aaKnown RBP12.25□□□□□ -0.45
SEC24C-204ENST00000477008 DIP2CQ9Y2E4 1556 aa12.25□□□□□ -0.45
SEC24C-204ENST00000477008 PLA2R1Q13018 1463 aa12.24□□□□□ -0.45
SEC24C-204ENST00000477008 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
SEC24C-204ENST00000477008 CLIP1P30622 1438 aa12.21□□□□□ -0.45
SEC24C-204ENST00000477008 TCOF1Q13428 1488 aaKnown RBP12.2□□□□□ -0.46
SEC24C-204ENST00000477008 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
SEC24C-204ENST00000477008 TROQ12816 1431 aaPredicted RBP12.19□□□□□ -0.46
SEC24C-204ENST00000477008 PTPRKQ15262 1439 aa12.19□□□□□ -0.46
SEC24C-204ENST00000477008 FMN1Q68DA7 1419 aa12.19□□□□□ -0.46
SEC24C-204ENST00000477008 KIF14Q15058 1648 aa12.19□□□□□ -0.46
SEC24C-204ENST00000477008 MROH2AA6NES4 1674 aa12.18□□□□□ -0.46
SEC24C-204ENST00000477008 CPS1P31327 1500 aa12.17□□□□□ -0.46
SEC24C-204ENST00000477008 EEA1Q15075 1411 aa12.17□□□□□ -0.46
SEC24C-204ENST00000477008 GGT6Q6P531 493 aa12.16□□□□□ -0.46
SEC24C-204ENST00000477008 SUPT6HQ7KZ85 1726 aaKnown RBP12.16□□□□□ -0.46
SEC24C-204ENST00000477008 SHANK2Q9UPX8 1470 aa12.14□□□□□ -0.47
SEC24C-204ENST00000477008 SPAG9O60271 1321 aaKnown RBP12.14□□□□□ -0.47
SEC24C-204ENST00000477008 CEP170BQ9Y4F5 1589 aaPredicted RBP12.14□□□□□ -0.47
SEC24C-204ENST00000477008 ANKLE2Q86XL3 938 aa12.14□□□□□ -0.47
SEC24C-204ENST00000477008 ZNF142P52746 1687 aaPredicted RBP12.13□□□□□ -0.47
SEC24C-204ENST00000477008 KIDINS220Q9ULH0 1771 aa12.13□□□□□ -0.47
SEC24C-204ENST00000477008 ZNF777Q9ULD5 760 aaPredicted RBP12.13□□□□□ -0.47
SEC24C-204ENST00000477008 CDC42BPBQ9Y5S2 1711 aa12.12□□□□□ -0.47
SEC24C-204ENST00000477008 ABCC1P33527 1531 aa12.11□□□□□ -0.47
SEC24C-204ENST00000477008 MYO3AQ8NEV4 1616 aa12.11□□□□□ -0.47
SEC24C-204ENST00000477008 A2ML1A8K2U0 1454 aa12.11□□□□□ -0.47
SEC24C-204ENST00000477008 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
SEC24C-204ENST00000477008 THEMISQ8N1K5 641 aaPredicted RBP12.11□□□□□ -0.47
SEC24C-204ENST00000477008 CLTCQ00610 1675 aaKnown RBP12.1□□□□□ -0.47
SEC24C-204ENST00000477008 ITSN2Q9NZM3 1697 aa12.1□□□□□ -0.47
SEC24C-204ENST00000477008 HNRNPMP52272 730 aaKnown RBP eCLIP12.09□□□□□ -0.47
SEC24C-204ENST00000477008 RGS17Q9UGC6 210 aaPredicted RBP12.09□□□□□ -0.47
SEC24C-204ENST00000477008 DNMT1P26358 1616 aaKnown RBP12.08□□□□□ -0.48
SEC24C-204ENST00000477008 SAMD9LQ8IVG5 1584 aa12.07□□□□□ -0.48
SEC24C-204ENST00000477008 PREX2Q70Z35 1606 aa12.07□□□□□ -0.48
SEC24C-204ENST00000477008 A2MP01023 1474 aa12.07□□□□□ -0.48
SEC24C-204ENST00000477008 KCNA4P22459 653 aa12.05□□□□□ -0.48
SEC24C-204ENST00000477008 TNRQ92752 1358 aa12.04□□□□□ -0.48
SEC24C-204ENST00000477008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEC24C-204ENST00000477008 ARHGAP35Q9NRY4 1499 aa12.03□□□□□ -0.48
SEC24C-204ENST00000477008 FBXO31Q5XUX0 539 aaPredicted RBP12.03□□□□□ -0.48
SEC24C-204ENST00000477008 POLR1AO95602 1720 aaPredicted RBP12.03□□□□□ -0.48
SEC24C-204ENST00000477008 NPHP4O75161 1426 aaPredicted RBP12.03□□□□□ -0.48
SEC24C-204ENST00000477008 KIAA1107Q9UPP5 1409 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms