RNA–Protein interactions for RNA: ENST00000476613.1

IRF1-209, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-209ENST00000476613 SIGLEC1Q9BZZ2 1709 aa13.72□□□□□ -0.21
IRF1-209ENST00000476613 ATP10AO60312 1499 aa13.71□□□□□ -0.21
IRF1-209ENST00000476613 HECW1Q76N89 1606 aa13.71□□□□□ -0.22
IRF1-209ENST00000476613 MLECQ14165 292 aa13.7□□□□□ -0.22
IRF1-209ENST00000476613 PTPRTO14522 1441 aa13.69□□□□□ -0.22
IRF1-209ENST00000476613 C9orf84Q5VXU9 1444 aa13.69□□□□□ -0.22
IRF1-209ENST00000476613 IQSEC2Q5JU85 1478 aa13.68□□□□□ -0.22
IRF1-209ENST00000476613 PLCH2O75038 1416 aa13.68□□□□□ -0.22
IRF1-209ENST00000476613 SCAPERQ9BY12 1400 aa13.68□□□□□ -0.22
IRF1-209ENST00000476613 STRCQ7RTU9 1775 aa13.68□□□□□ -0.22
IRF1-209ENST00000476613 SPATA31D1Q6ZQQ2 1576 aa13.67□□□□□ -0.22
IRF1-209ENST00000476613 UHRF1BP1Q6BDS2 1440 aa13.67□□□□□ -0.22
IRF1-209ENST00000476613 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
IRF1-209ENST00000476613 SETD1BQ9UPS6 1966 aaKnown RBP13.66□□□□□ -0.22
IRF1-209ENST00000476613 CEBPAP49715 358 aaPredicted RBP13.63□□□□□ -0.23
IRF1-209ENST00000476613 EFCAB2Q5VUJ9 269 aa13.63□□□□□ -0.23
IRF1-209ENST00000476613 ZNF518AQ6AHZ1 1483 aa13.61□□□□□ -0.23
IRF1-209ENST00000476613 REREQ9P2R6 1566 aa13.61□□□□□ -0.23
IRF1-209ENST00000476613 LTBP4Q8N2S1 1624 aa13.61□□□□□ -0.23
IRF1-209ENST00000476613 EEA1Q15075 1411 aa13.59□□□□□ -0.23
IRF1-209ENST00000476613 KDM5CP41229 1560 aa13.58□□□□□ -0.23
IRF1-209ENST00000476613 TRAPPC8Q9Y2L5 1435 aa13.57□□□□□ -0.24
IRF1-209ENST00000476613 CDK11AQ9UQ88 783 aaPredicted RBP13.57□□□□□ -0.24
IRF1-209ENST00000476613 MYO5CQ9NQX4 1742 aa13.56□□□□□ -0.24
IRF1-209ENST00000476613 AGLP35573 1532 aa13.55□□□□□ -0.24
IRF1-209ENST00000476613 CDK13Q14004 1512 aaKnown RBP13.55□□□□□ -0.24
IRF1-209ENST00000476613 NCOA1Q15788 1441 aa13.55□□□□□ -0.24
IRF1-209ENST00000476613 MLH3Q9UHC1 1453 aa13.55□□□□□ -0.24
IRF1-209ENST00000476613 C3P01024 1663 aa13.54□□□□□ -0.24
IRF1-209ENST00000476613 ESF1Q9H501 851 aaKnown RBP13.54□□□□□ -0.24
IRF1-209ENST00000476613 CNTLNQ9NXG0 1405 aa13.54□□□□□ -0.24
IRF1-209ENST00000476613 DIP2CQ9Y2E4 1556 aa13.54□□□□□ -0.24
IRF1-209ENST00000476613 RANGAP1P46060 587 aaPredicted RBP13.53□□□□□ -0.24
IRF1-209ENST00000476613 AFAP1Q8N556 730 aa13.53□□□□□ -0.24
IRF1-209ENST00000476613 FMN1Q68DA7 1419 aa13.51□□□□□ -0.25
IRF1-209ENST00000476613 ARHGAP5Q13017 1502 aa13.5□□□□□ -0.25
IRF1-209ENST00000476613 NPATQ14207 1427 aa13.5□□□□□ -0.25
IRF1-209ENST00000476613 MYT1LQ9UL68 1186 aa13.5□□□□□ -0.25
IRF1-209ENST00000476613 KIF14Q15058 1648 aa13.5□□□□□ -0.25
IRF1-209ENST00000476613 CLIP1P30622 1438 aa13.48□□□□□ -0.25
IRF1-209ENST00000476613 TROQ12816 1431 aaPredicted RBP13.48□□□□□ -0.25
IRF1-209ENST00000476613 ABCA6Q8N139 1617 aa13.48□□□□□ -0.25
IRF1-209ENST00000476613 CAMSAP1Q5T5Y3 1602 aa13.46□□□□□ -0.25
IRF1-209ENST00000476613 UBAP1LF5GYI3 381 aa13.46□□□□□ -0.25
IRF1-209ENST00000476613 PKD2Q13563 968 aa13.46□□□□□ -0.25
IRF1-209ENST00000476613 MROH2AA6NES4 1674 aa13.46□□□□□ -0.26
IRF1-209ENST00000476613 PLA2R1Q13018 1463 aa13.45□□□□□ -0.26
IRF1-209ENST00000476613 ATP1B4Q9UN42 357 aaPredicted RBP13.43□□□□□ -0.26
IRF1-209ENST00000476613 ABCC1P33527 1531 aa13.43□□□□□ -0.26
IRF1-209ENST00000476613 ZMYM3Q14202 1370 aa13.43□□□□□ -0.26
IRF1-209ENST00000476613 ZNF335Q9H4Z2 1342 aaPredicted RBP13.42□□□□□ -0.26
IRF1-209ENST00000476613 CDC42BPBQ9Y5S2 1711 aa13.42□□□□□ -0.26
IRF1-209ENST00000476613 TCOF1Q13428 1488 aaKnown RBP13.41□□□□□ -0.26
IRF1-209ENST00000476613 NCKAP5LQ9HCH0 1330 aa13.4□□□□□ -0.26
IRF1-209ENST00000476613 KIDINS220Q9ULH0 1771 aa13.4□□□□□ -0.26
IRF1-209ENST00000476613 PREX2Q70Z35 1606 aa13.4□□□□□ -0.26
IRF1-209ENST00000476613 ZNF142P52746 1687 aaPredicted RBP13.4□□□□□ -0.26
IRF1-209ENST00000476613 ITSN2Q9NZM3 1697 aa13.4□□□□□ -0.26
IRF1-209ENST00000476613 ARHGAP35Q9NRY4 1499 aa13.38□□□□□ -0.27
IRF1-209ENST00000476613 PPP6R1Q9UPN7 881 aa13.37□□□□□ -0.27
IRF1-209ENST00000476613 TOM1O60784 492 aa13.36□□□□□ -0.27
IRF1-209ENST00000476613 MED1Q15648 1581 aaPredicted RBP13.36□□□□□ -0.27
IRF1-209ENST00000476613 CEP170BQ9Y4F5 1589 aaPredicted RBP13.36□□□□□ -0.27
IRF1-209ENST00000476613 MYO3AQ8NEV4 1616 aa13.35□□□□□ -0.27
IRF1-209ENST00000476613 PTPRKQ15262 1439 aa13.35□□□□□ -0.27
IRF1-209ENST00000476613 SAMD9LQ8IVG5 1584 aa13.35□□□□□ -0.27
IRF1-209ENST00000476613 CPS1P31327 1500 aa13.34□□□□□ -0.27
IRF1-209ENST00000476613 CCDC18Q5T9S5 1454 aa13.34□□□□□ -0.27
IRF1-209ENST00000476613 UBTFP17480 764 aaKnown RBP13.33□□□□□ -0.28
IRF1-209ENST00000476613 HSPA1LP34931 641 aa13.33□□□□□ -0.28
IRF1-209ENST00000476613 SPAG9O60271 1321 aaKnown RBP13.33□□□□□ -0.28
IRF1-209ENST00000476613 SUPT6HQ7KZ85 1726 aaKnown RBP13.33□□□□□ -0.28
IRF1-209ENST00000476613 LRRIQ1Q96JM4 1722 aa13.32□□□□□ -0.28
IRF1-209ENST00000476613 PLXNC1O60486 1568 aa13.32□□□□□ -0.28
IRF1-209ENST00000476613 CLTCQ00610 1675 aaKnown RBP13.31□□□□□ -0.28
IRF1-209ENST00000476613 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
IRF1-209ENST00000476613 KIAA1107Q9UPP5 1409 aa13.3□□□□□ -0.28
IRF1-209ENST00000476613 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
IRF1-209ENST00000476613 A2ML1A8K2U0 1454 aa13.3□□□□□ -0.28
IRF1-209ENST00000476613 A2MP01023 1474 aa13.3□□□□□ -0.28
IRF1-209ENST00000476613 PLEKHH2Q8IVE3 1493 aa13.29□□□□□ -0.28
IRF1-209ENST00000476613 CASKIN1Q8WXD9 1431 aa13.29□□□□□ -0.28
IRF1-209ENST00000476613 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
IRF1-209ENST00000476613 PIP4K2BP78356 416 aa13.28□□□□□ -0.28
IRF1-209ENST00000476613 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
IRF1-209ENST00000476613 SHANK2Q9UPX8 1470 aa13.28□□□□□ -0.28
IRF1-209ENST00000476613 SYCP2Q9BX26 1530 aa13.28□□□□□ -0.28
IRF1-209ENST00000476613 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
IRF1-209ENST00000476613 GGT6Q6P531 493 aa13.27□□□□□ -0.29
IRF1-209ENST00000476613 PHF23Q9BUL5 403 aaPredicted RBP13.27□□□□□ -0.29
IRF1-209ENST00000476613 INO80Q9ULG1 1556 aaPredicted RBP13.27□□□□□ -0.29
IRF1-209ENST00000476613 GPATCH8Q9UKJ3 1502 aaKnown RBP13.26□□□□□ -0.29
IRF1-209ENST00000476613 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
IRF1-209ENST00000476613 HNRNPMP52272 730 aaKnown RBP eCLIP13.25□□□□□ -0.29
IRF1-209ENST00000476613 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
IRF1-209ENST00000476613 NEURL4Q96JN8 1562 aa13.24□□□□□ -0.29
IRF1-209ENST00000476613 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
IRF1-209ENST00000476613 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
IRF1-209ENST00000476613 ADGBQ8N7X0 1667 aa13.23□□□□□ -0.29
IRF1-209ENST00000476613 CFDP1Q9UEE9 299 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms