RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 PLEKHD1A6NEE1 506 aa24.96■■□□□ 1.59
CSNK2B-207ENST00000475875 MLECQ14165 292 aa24.96■■□□□ 1.59
CSNK2B-207ENST00000475875 STRCQ7RTU9 1775 aa24.93■■□□□ 1.58
CSNK2B-207ENST00000475875 HECW1Q76N89 1606 aa24.92■■□□□ 1.58
CSNK2B-207ENST00000475875 PTPRTO14522 1441 aa24.92■■□□□ 1.58
CSNK2B-207ENST00000475875 IQSEC2Q5JU85 1478 aa24.91■■□□□ 1.58
CSNK2B-207ENST00000475875 UHRF1BP1Q6BDS2 1440 aa24.91■■□□□ 1.58
CSNK2B-207ENST00000475875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.91■■□□□ 1.58
CSNK2B-207ENST00000475875 ATP10AO60312 1499 aa24.89■■□□□ 1.58
CSNK2B-207ENST00000475875 C9orf84Q5VXU9 1444 aa24.88■■□□□ 1.57
CSNK2B-207ENST00000475875 SETD1BQ9UPS6 1966 aaKnown RBP24.85■■□□□ 1.57
CSNK2B-207ENST00000475875 SCAPERQ9BY12 1400 aa24.84■■□□□ 1.57
CSNK2B-207ENST00000475875 CEBPAP49715 358 aaPredicted RBP24.83■■□□□ 1.57
CSNK2B-207ENST00000475875 LTBP4Q8N2S1 1624 aa24.81■■□□□ 1.56
CSNK2B-207ENST00000475875 PLCH2O75038 1416 aa24.8■■□□□ 1.56
CSNK2B-207ENST00000475875 EFCAB2Q5VUJ9 269 aa24.7■■□□□ 1.54
CSNK2B-207ENST00000475875 ZNF518AQ6AHZ1 1483 aa24.7■■□□□ 1.54
CSNK2B-207ENST00000475875 NCOA1Q15788 1441 aa24.69■■□□□ 1.54
CSNK2B-207ENST00000475875 REREQ9P2R6 1566 aa24.68■■□□□ 1.54
CSNK2B-207ENST00000475875 TRAPPC8Q9Y2L5 1435 aa24.68■■□□□ 1.54
CSNK2B-207ENST00000475875 KDM5CP41229 1560 aa24.65■■□□□ 1.54
CSNK2B-207ENST00000475875 CSRNP3Q8WYN3 585 aa24.65■■□□□ 1.54
CSNK2B-207ENST00000475875 C3P01024 1663 aa24.63■■□□□ 1.53
CSNK2B-207ENST00000475875 AGLP35573 1532 aa24.61■■□□□ 1.53
CSNK2B-207ENST00000475875 ESF1Q9H501 851 aaKnown RBP24.6■■□□□ 1.53
CSNK2B-207ENST00000475875 DIP2CQ9Y2E4 1556 aa24.59■■□□□ 1.53
CSNK2B-207ENST00000475875 CDK13Q14004 1512 aaKnown RBP24.59■■□□□ 1.53
CSNK2B-207ENST00000475875 CNTLNQ9NXG0 1405 aa24.59■■□□□ 1.53
CSNK2B-207ENST00000475875 MYO5CQ9NQX4 1742 aa24.58■■□□□ 1.53
CSNK2B-207ENST00000475875 UBAP1LF5GYI3 381 aa24.58■■□□□ 1.53
CSNK2B-207ENST00000475875 AFAP1Q8N556 730 aa24.57■■□□□ 1.52
CSNK2B-207ENST00000475875 MLH3Q9UHC1 1453 aa24.56■■□□□ 1.52
CSNK2B-207ENST00000475875 RANGAP1P46060 587 aaPredicted RBP24.55■■□□□ 1.52
CSNK2B-207ENST00000475875 NPATQ14207 1427 aa24.54■■□□□ 1.52
CSNK2B-207ENST00000475875 MYT1LQ9UL68 1186 aa24.52■■□□□ 1.52
CSNK2B-207ENST00000475875 CDK11AQ9UQ88 783 aaPredicted RBP24.52■■□□□ 1.52
CSNK2B-207ENST00000475875 CAMSAP1Q5T5Y3 1602 aa24.52■■□□□ 1.52
CSNK2B-207ENST00000475875 ARHGAP5Q13017 1502 aa24.5■■□□□ 1.51
CSNK2B-207ENST00000475875 ZNF335Q9H4Z2 1342 aaPredicted RBP24.49■■□□□ 1.51
CSNK2B-207ENST00000475875 ABCA6Q8N139 1617 aa24.49■■□□□ 1.51
CSNK2B-207ENST00000475875 KIF14Q15058 1648 aa24.47■■□□□ 1.51
CSNK2B-207ENST00000475875 EEA1Q15075 1411 aa24.47■■□□□ 1.51
CSNK2B-207ENST00000475875 PKD2Q13563 968 aa24.47■■□□□ 1.51
CSNK2B-207ENST00000475875 PLA2R1Q13018 1463 aa24.45■■□□□ 1.51
CSNK2B-207ENST00000475875 TROQ12816 1431 aaPredicted RBP24.44■■□□□ 1.5
CSNK2B-207ENST00000475875 MED1Q15648 1581 aaPredicted RBP24.43■■□□□ 1.5
CSNK2B-207ENST00000475875 MROH2AA6NES4 1674 aa24.43■■□□□ 1.5
CSNK2B-207ENST00000475875 NCKAP5LQ9HCH0 1330 aa24.42■■□□□ 1.5
CSNK2B-207ENST00000475875 FMN1Q68DA7 1419 aa24.42■■□□□ 1.5
CSNK2B-207ENST00000475875 CLIP1P30622 1438 aa24.41■■□□□ 1.5
CSNK2B-207ENST00000475875 TCOF1Q13428 1488 aaKnown RBP24.39■■□□□ 1.5
CSNK2B-207ENST00000475875 ZMYM3Q14202 1370 aa24.39■■□□□ 1.49
CSNK2B-207ENST00000475875 ABCC1P33527 1531 aa24.36■■□□□ 1.49
CSNK2B-207ENST00000475875 HSPA1LP34931 641 aa24.36■■□□□ 1.49
CSNK2B-207ENST00000475875 ZNF142P52746 1687 aaPredicted RBP24.36■■□□□ 1.49
CSNK2B-207ENST00000475875 ATP1B4Q9UN42 357 aaPredicted RBP24.34■■□□□ 1.49
CSNK2B-207ENST00000475875 PPP6R1Q9UPN7 881 aa24.33■■□□□ 1.49
CSNK2B-207ENST00000475875 KIDINS220Q9ULH0 1771 aa24.33■■□□□ 1.49
CSNK2B-207ENST00000475875 TOM1O60784 492 aa24.32■■□□□ 1.48
CSNK2B-207ENST00000475875 CDC42BPBQ9Y5S2 1711 aa24.31■■□□□ 1.48
CSNK2B-207ENST00000475875 CEP170BQ9Y4F5 1589 aaPredicted RBP24.3■■□□□ 1.48
CSNK2B-207ENST00000475875 MYO3AQ8NEV4 1616 aa24.3■■□□□ 1.48
CSNK2B-207ENST00000475875 ITSN2Q9NZM3 1697 aa24.29■■□□□ 1.48
CSNK2B-207ENST00000475875 PREX2Q70Z35 1606 aa24.28■■□□□ 1.48
CSNK2B-207ENST00000475875 CPS1P31327 1500 aa24.27■■□□□ 1.48
CSNK2B-207ENST00000475875 PHF23Q9BUL5 403 aaPredicted RBP24.27■■□□□ 1.48
CSNK2B-207ENST00000475875 SCAF1Q9H7N4 1312 aaKnown RBP24.27■■□□□ 1.48
CSNK2B-207ENST00000475875 PTPRKQ15262 1439 aa24.26■■□□□ 1.47
CSNK2B-207ENST00000475875 PIP4K2BP78356 416 aa24.25■■□□□ 1.47
CSNK2B-207ENST00000475875 SUPT6HQ7KZ85 1726 aaKnown RBP24.22■■□□□ 1.47
CSNK2B-207ENST00000475875 SAMD9LQ8IVG5 1584 aa24.21■■□□□ 1.47
CSNK2B-207ENST00000475875 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
CSNK2B-207ENST00000475875 A2ML1A8K2U0 1454 aa24.19■■□□□ 1.46
CSNK2B-207ENST00000475875 CLTCQ00610 1675 aaKnown RBP24.18■■□□□ 1.46
CSNK2B-207ENST00000475875 SHANK2Q9UPX8 1470 aa24.18■■□□□ 1.46
CSNK2B-207ENST00000475875 SPAG9O60271 1321 aaKnown RBP24.17■■□□□ 1.46
CSNK2B-207ENST00000475875 PLXNC1O60486 1568 aa24.16■■□□□ 1.46
CSNK2B-207ENST00000475875 DNMT1P26358 1616 aaKnown RBP24.13■■□□□ 1.45
CSNK2B-207ENST00000475875 A2MP01023 1474 aa24.13■■□□□ 1.45
CSNK2B-207ENST00000475875 CCDC18Q5T9S5 1454 aa24.13■■□□□ 1.45
CSNK2B-207ENST00000475875 ATP7AQ04656 1500 aa24.1■■□□□ 1.45
CSNK2B-207ENST00000475875 LRRIQ1Q96JM4 1722 aa24.1■■□□□ 1.45
CSNK2B-207ENST00000475875 CDC42BPAQ5VT25 1732 aa24.1■■□□□ 1.45
CSNK2B-207ENST00000475875 NEURL4Q96JN8 1562 aa24.09■■□□□ 1.45
CSNK2B-207ENST00000475875 SYCP2Q9BX26 1530 aa24.09■■□□□ 1.45
CSNK2B-207ENST00000475875 KIAA1107Q9UPP5 1409 aa24.09■■□□□ 1.45
CSNK2B-207ENST00000475875 POLR1AO95602 1720 aaPredicted RBP24.08■■□□□ 1.45
CSNK2B-207ENST00000475875 GGT6Q6P531 493 aa24.08■■□□□ 1.45
CSNK2B-207ENST00000475875 UBTFP17480 764 aaKnown RBP24.07■■□□□ 1.44
CSNK2B-207ENST00000475875 INO80Q9ULG1 1556 aaPredicted RBP24.07■■□□□ 1.44
CSNK2B-207ENST00000475875 ALKQ9UM73 1620 aa24.06■■□□□ 1.44
CSNK2B-207ENST00000475875 PLEKHH2Q8IVE3 1493 aa24.06■■□□□ 1.44
CSNK2B-207ENST00000475875 VWDEQ8N2E2 1590 aa24.04■■□□□ 1.44
CSNK2B-207ENST00000475875 ZNF777Q9ULD5 760 aaPredicted RBP24.04■■□□□ 1.44
CSNK2B-207ENST00000475875 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
CSNK2B-207ENST00000475875 ANKLE2Q86XL3 938 aa24.03■■□□□ 1.44
CSNK2B-207ENST00000475875 HNRNPMP52272 730 aaKnown RBP eCLIP24.02■■□□□ 1.44
CSNK2B-207ENST00000475875 GPATCH8Q9UKJ3 1502 aaKnown RBP24.01■■□□□ 1.43
CSNK2B-207ENST00000475875 TNRQ92752 1358 aa24.01■■□□□ 1.43
CSNK2B-207ENST00000475875 MED14O60244 1454 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms