RNA–Protein interactions for RNA: ENST00000475060.1

CTPS1-207, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-207ENST00000475060 SHANK2Q9UPX8 1470 aa9.5□□□□□ -0.89
CTPS1-207ENST00000475060 CHD1O14646 1710 aa9.5□□□□□ -0.89
CTPS1-207ENST00000475060 PLB1Q6P1J6 1458 aa9.49□□□□□ -0.89
CTPS1-207ENST00000475060 CHMP7Q8WUX9 453 aaPredicted RBP9.49□□□□□ -0.89
CTPS1-207ENST00000475060 GPATCH8Q9UKJ3 1502 aaKnown RBP9.49□□□□□ -0.89
CTPS1-207ENST00000475060 ABCC5O15440 1437 aa9.48□□□□□ -0.89
CTPS1-207ENST00000475060 CDC42BPAQ5VT25 1732 aa9.48□□□□□ -0.89
CTPS1-207ENST00000475060 ATP1B4Q9UN42 357 aaPredicted RBP9.48□□□□□ -0.89
CTPS1-207ENST00000475060 KIF14Q15058 1648 aa9.48□□□□□ -0.89
CTPS1-207ENST00000475060 ARHGEF5Q12774 1597 aa9.47□□□□□ -0.89
CTPS1-207ENST00000475060 JPH4Q96JJ6 628 aa9.47□□□□□ -0.89
CTPS1-207ENST00000475060 CAMSAP2Q08AD1 1489 aa9.47□□□□□ -0.89
CTPS1-207ENST00000475060 KDM6BO15054 1643 aa9.46□□□□□ -0.89
CTPS1-207ENST00000475060 ITGAEP38570 1179 aa9.46□□□□□ -0.9
CTPS1-207ENST00000475060 CNKSR2Q8WXI2 1034 aa9.46□□□□□ -0.9
CTPS1-207ENST00000475060 ATP10BO94823 1461 aa9.46□□□□□ -0.9
CTPS1-207ENST00000475060 CLASP1Q7Z460 1538 aa9.46□□□□□ -0.9
CTPS1-207ENST00000475060 NCBP3Q53F19 620 aaKnown RBP9.45□□□□□ -0.9
CTPS1-207ENST00000475060 PRG4Q92954 1404 aaPredicted RBP9.45□□□□□ -0.9
CTPS1-207ENST00000475060 KDM5DQ9BY66 1539 aa9.45□□□□□ -0.9
CTPS1-207ENST00000475060 PPP1R15AO75807 674 aaPredicted RBP9.44□□□□□ -0.9
CTPS1-207ENST00000475060 PREX2Q70Z35 1606 aa9.44□□□□□ -0.9
CTPS1-207ENST00000475060 DMRT2Q9Y5R5 561 aa9.43□□□□□ -0.9
CTPS1-207ENST00000475060 MAST1Q9Y2H9 1570 aa9.42□□□□□ -0.9
CTPS1-207ENST00000475060 UHRF1BP1LA0JNW5 1464 aa9.42□□□□□ -0.9
CTPS1-207ENST00000475060 NCOA1Q15788 1441 aa9.42□□□□□ -0.9
CTPS1-207ENST00000475060 CENPBP07199 599 aaPredicted RBP9.42□□□□□ -0.9
CTPS1-207ENST00000475060 ABCC2Q92887 1545 aa9.41□□□□□ -0.9
CTPS1-207ENST00000475060 RPRD2Q5VT52 1461 aaKnown RBP9.4□□□□□ -0.9
CTPS1-207ENST00000475060 PTPRGP23470 1445 aa9.39□□□□□ -0.91
CTPS1-207ENST00000475060 CDC42BPBQ9Y5S2 1711 aa9.39□□□□□ -0.91
CTPS1-207ENST00000475060 NPM3O75607 178 aaKnown RBP9.39□□□□□ -0.91
CTPS1-207ENST00000475060 MIER1Q8N108 512 aa9.39□□□□□ -0.91
CTPS1-207ENST00000475060 SIN3AQ96ST3 1273 aa9.39□□□□□ -0.91
CTPS1-207ENST00000475060 PZPP20742 1482 aa9.39□□□□□ -0.91
CTPS1-207ENST00000475060 TEX14Q8IWB6 1497 aa9.39□□□□□ -0.91
CTPS1-207ENST00000475060 MBD5Q9P267 1494 aa9.39□□□□□ -0.91
CTPS1-207ENST00000475060 TONSLQ96HA7 1378 aa9.38□□□□□ -0.91
CTPS1-207ENST00000475060 ANKRD30BQ9BXX2 1392 aa9.38□□□□□ -0.91
CTPS1-207ENST00000475060 ARAP3Q8WWN8 1544 aa9.38□□□□□ -0.91
CTPS1-207ENST00000475060 SAMD9LQ8IVG5 1584 aa9.37□□□□□ -0.91
CTPS1-207ENST00000475060 NEUROD1Q13562 356 aa9.36□□□□□ -0.91
CTPS1-207ENST00000475060 PLXNC1O60486 1568 aa9.36□□□□□ -0.91
CTPS1-207ENST00000475060 POLR1AO95602 1720 aaPredicted RBP9.36□□□□□ -0.91
CTPS1-207ENST00000475060 PLEKHH2Q8IVE3 1493 aa9.35□□□□□ -0.91
CTPS1-207ENST00000475060 PLEKHD1A6NEE1 506 aa9.35□□□□□ -0.91
CTPS1-207ENST00000475060 RSPH4AQ5TD94 716 aa9.35□□□□□ -0.91
CTPS1-207ENST00000475060 MYO5CQ9NQX4 1742 aa9.35□□□□□ -0.91
CTPS1-207ENST00000475060 CFDP1Q9UEE9 299 aaPredicted RBP9.35□□□□□ -0.91
CTPS1-207ENST00000475060 KIAA1107Q9UPP5 1409 aa9.35□□□□□ -0.91
CTPS1-207ENST00000475060 ANKRD30AQ9BXX3 1397 aa9.35□□□□□ -0.91
CTPS1-207ENST00000475060 CCDC141Q6ZP82 1450 aa9.34□□□□□ -0.91
CTPS1-207ENST00000475060 C9orf84Q5VXU9 1444 aa9.34□□□□□ -0.91
CTPS1-207ENST00000475060 MPHOSPH9Q99550 1183 aa9.34□□□□□ -0.91
CTPS1-207ENST00000475060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.34□□□□□ -0.91
CTPS1-207ENST00000475060 UNC13BO14795 1591 aa9.33□□□□□ -0.92
CTPS1-207ENST00000475060 TTC37Q6PGP7 1564 aa9.33□□□□□ -0.92
CTPS1-207ENST00000475060 RRP7BPQ9NSQ0 103 aa9.33□□□□□ -0.92
CTPS1-207ENST00000475060 MAGI2Q86UL8 1455 aa9.33□□□□□ -0.92
CTPS1-207ENST00000475060 ERCC6L2Q5T890 1561 aa9.33□□□□□ -0.92
CTPS1-207ENST00000475060 ZNF644Q9H582 1327 aaPredicted RBP9.32□□□□□ -0.92
CTPS1-207ENST00000475060 ANKRD50Q9ULJ7 1429 aa9.32□□□□□ -0.92
CTPS1-207ENST00000475060 ARHGEF12Q9NZN5 1544 aa9.32□□□□□ -0.92
CTPS1-207ENST00000475060 ZCCHC11Q5TAX3 1644 aaKnown RBP9.32□□□□□ -0.92
CTPS1-207ENST00000475060 FBLN2P98095 1184 aa9.31□□□□□ -0.92
CTPS1-207ENST00000475060 UHRF1BP1Q6BDS2 1440 aa9.3□□□□□ -0.92
CTPS1-207ENST00000475060 CHIC2Q9UKJ5 165 aa9.29□□□□□ -0.92
CTPS1-207ENST00000475060 SPATA31E1Q6ZUB1 1445 aa9.29□□□□□ -0.92
CTPS1-207ENST00000475060 ATP10AO60312 1499 aa9.28□□□□□ -0.92
CTPS1-207ENST00000475060 IQGAP3Q86VI3 1631 aa9.28□□□□□ -0.92
CTPS1-207ENST00000475060 ABCC1P33527 1531 aa9.28□□□□□ -0.92
CTPS1-207ENST00000475060 CCER2I3L3R5 266 aa9.28□□□□□ -0.92
CTPS1-207ENST00000475060 PLCH2O75038 1416 aa9.28□□□□□ -0.92
CTPS1-207ENST00000475060 SYCP2Q9BX26 1530 aa9.27□□□□□ -0.93
CTPS1-207ENST00000475060 RNF216Q9NWF9 866 aaPredicted RBP9.27□□□□□ -0.93
CTPS1-207ENST00000475060 WDR7Q9Y4E6 1490 aa9.26□□□□□ -0.93
CTPS1-207ENST00000475060 DUOX2Q9NRD8 1548 aa9.26□□□□□ -0.93
CTPS1-207ENST00000475060 KIF15Q9NS87 1388 aa9.25□□□□□ -0.93
CTPS1-207ENST00000475060 ERBINQ96RT1 1412 aa9.25□□□□□ -0.93
CTPS1-207ENST00000475060 ABCA9Q8IUA7 1624 aa9.25□□□□□ -0.93
CTPS1-207ENST00000475060 ARID3CA6NKF2 412 aa9.25□□□□□ -0.93
CTPS1-207ENST00000475060 ARHGAP5Q13017 1502 aa9.25□□□□□ -0.93
CTPS1-207ENST00000475060 FAM135AQ9P2D6 1515 aa9.25□□□□□ -0.93
CTPS1-207ENST00000475060 RTEL1-TNFRSF6BF6WH68 1400 aa9.24□□□□□ -0.93
CTPS1-207ENST00000475060 RALGAPBQ86X10 1494 aa9.24□□□□□ -0.93
CTPS1-207ENST00000475060 HOXD11P31277 338 aaPredicted RBP9.24□□□□□ -0.93
CTPS1-207ENST00000475060 L3MBTL2Q969R5 705 aa9.24□□□□□ -0.93
CTPS1-207ENST00000475060 TRIM52Q96A61 297 aa9.24□□□□□ -0.93
CTPS1-207ENST00000475060 DEPDC5O75140 1603 aa9.23□□□□□ -0.93
CTPS1-207ENST00000475060 LAMC1P11047 1609 aa9.23□□□□□ -0.93
CTPS1-207ENST00000475060 SLC4A1APQ9BWU0 796 aaKnown RBP9.23□□□□□ -0.93
CTPS1-207ENST00000475060 KDM5CP41229 1560 aa9.23□□□□□ -0.93
CTPS1-207ENST00000475060 NEURL4Q96JN8 1562 aa9.23□□□□□ -0.93
CTPS1-207ENST00000475060 TSPY4P0CV99 314 aa9.22□□□□□ -0.93
CTPS1-207ENST00000475060 TSPY10P0CW01 314 aa9.22□□□□□ -0.93
CTPS1-207ENST00000475060 INO80Q9ULG1 1556 aaPredicted RBP9.21□□□□□ -0.93
CTPS1-207ENST00000475060 ARID4BQ4LE39 1312 aaPredicted RBP9.21□□□□□ -0.94
CTPS1-207ENST00000475060 CNTLNQ9NXG0 1405 aa9.21□□□□□ -0.94
CTPS1-207ENST00000475060 ZFYVE16Q7Z3T8 1539 aa9.21□□□□□ -0.94
CTPS1-207ENST00000475060 EIF2AK4Q9P2K8 1649 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms