RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 CDK13Q14004 1512 aaKnown RBP20.92■□□□□ 0.94
TRIM13-207ENST00000474805 PREX1Q8TCU6 1659 aa20.89■□□□□ 0.94
TRIM13-207ENST00000474805 PLCH2O75038 1416 aa20.89■□□□□ 0.94
TRIM13-207ENST00000474805 CEBPAP49715 358 aaPredicted RBP20.89■□□□□ 0.93
TRIM13-207ENST00000474805 ARHGEF12Q9NZN5 1544 aa20.88■□□□□ 0.93
TRIM13-207ENST00000474805 ATP10AO60312 1499 aa20.88■□□□□ 0.93
TRIM13-207ENST00000474805 STRCQ7RTU9 1775 aa20.85■□□□□ 0.93
TRIM13-207ENST00000474805 EEA1Q15075 1411 aa20.85■□□□□ 0.93
TRIM13-207ENST00000474805 C9orf84Q5VXU9 1444 aa20.85■□□□□ 0.93
TRIM13-207ENST00000474805 MYO5CQ9NQX4 1742 aa20.84■□□□□ 0.93
TRIM13-207ENST00000474805 EFCAB2Q5VUJ9 269 aa20.83■□□□□ 0.93
TRIM13-207ENST00000474805 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.93
TRIM13-207ENST00000474805 ILDR2Q71H61 639 aa20.82■□□□□ 0.92
TRIM13-207ENST00000474805 DISP3Q9P2K9 1392 aa20.82■□□□□ 0.92
TRIM13-207ENST00000474805 SETD1BQ9UPS6 1966 aaKnown RBP20.81■□□□□ 0.92
TRIM13-207ENST00000474805 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
TRIM13-207ENST00000474805 AFAP1Q8N556 730 aa20.77■□□□□ 0.92
TRIM13-207ENST00000474805 MYT1LQ9UL68 1186 aa20.77■□□□□ 0.92
TRIM13-207ENST00000474805 KIF14Q15058 1648 aa20.77■□□□□ 0.92
TRIM13-207ENST00000474805 EHMT2Q96KQ7 1210 aa20.75■□□□□ 0.91
TRIM13-207ENST00000474805 UHRF1BP1Q6BDS2 1440 aa20.75■□□□□ 0.91
TRIM13-207ENST00000474805 ZNF518AQ6AHZ1 1483 aa20.75■□□□□ 0.91
TRIM13-207ENST00000474805 SOCS7O14512 581 aa20.73■□□□□ 0.91
TRIM13-207ENST00000474805 CDK11AQ9UQ88 783 aaPredicted RBP20.73■□□□□ 0.91
TRIM13-207ENST00000474805 ARHGAP5Q13017 1502 aa20.73■□□□□ 0.91
TRIM13-207ENST00000474805 C3P01024 1663 aa20.72■□□□□ 0.91
TRIM13-207ENST00000474805 KDM5CP41229 1560 aa20.72■□□□□ 0.91
TRIM13-207ENST00000474805 DIP2CQ9Y2E4 1556 aa20.72■□□□□ 0.91
TRIM13-207ENST00000474805 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
TRIM13-207ENST00000474805 UBTFP17480 764 aaKnown RBP20.69■□□□□ 0.9
TRIM13-207ENST00000474805 LRRIQ1Q96JM4 1722 aa20.68■□□□□ 0.9
TRIM13-207ENST00000474805 CDC42BPBQ9Y5S2 1711 aa20.68■□□□□ 0.9
TRIM13-207ENST00000474805 ABCA6Q8N139 1617 aa20.67■□□□□ 0.9
TRIM13-207ENST00000474805 PTPRTO14522 1441 aa20.67■□□□□ 0.9
TRIM13-207ENST00000474805 TROQ12816 1431 aaPredicted RBP20.67■□□□□ 0.9
TRIM13-207ENST00000474805 ARHGAP35Q9NRY4 1499 aa20.67■□□□□ 0.9
TRIM13-207ENST00000474805 REREQ9P2R6 1566 aa20.66■□□□□ 0.9
TRIM13-207ENST00000474805 ESF1Q9H501 851 aaKnown RBP20.65■□□□□ 0.9
TRIM13-207ENST00000474805 SPATA31D1Q6ZQQ2 1576 aa20.63■□□□□ 0.89
TRIM13-207ENST00000474805 MLH3Q9UHC1 1453 aa20.63■□□□□ 0.89
TRIM13-207ENST00000474805 CLIP1P30622 1438 aa20.63■□□□□ 0.89
TRIM13-207ENST00000474805 LTBP4Q8N2S1 1624 aa20.63■□□□□ 0.89
TRIM13-207ENST00000474805 TRAPPC8Q9Y2L5 1435 aa20.61■□□□□ 0.89
TRIM13-207ENST00000474805 AGLP35573 1532 aa20.6■□□□□ 0.89
TRIM13-207ENST00000474805 ITSN2Q9NZM3 1697 aa20.59■□□□□ 0.89
TRIM13-207ENST00000474805 PREX2Q70Z35 1606 aa20.58■□□□□ 0.89
TRIM13-207ENST00000474805 KIDINS220Q9ULH0 1771 aa20.58■□□□□ 0.89
TRIM13-207ENST00000474805 ABCC1P33527 1531 aa20.58■□□□□ 0.88
TRIM13-207ENST00000474805 NCOA1Q15788 1441 aa20.56■□□□□ 0.88
TRIM13-207ENST00000474805 IQSEC2Q5JU85 1478 aa20.53■□□□□ 0.88
TRIM13-207ENST00000474805 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
TRIM13-207ENST00000474805 CAMSAP1Q5T5Y3 1602 aa20.53■□□□□ 0.88
TRIM13-207ENST00000474805 CNTLNQ9NXG0 1405 aa20.53■□□□□ 0.88
TRIM13-207ENST00000474805 NCKAP5LQ9HCH0 1330 aa20.5■□□□□ 0.87
TRIM13-207ENST00000474805 SUPT6HQ7KZ85 1726 aaKnown RBP20.5■□□□□ 0.87
TRIM13-207ENST00000474805 MROH2AA6NES4 1674 aa20.49■□□□□ 0.87
TRIM13-207ENST00000474805 ZMYM3Q14202 1370 aa20.48■□□□□ 0.87
TRIM13-207ENST00000474805 ZNF777Q9ULD5 760 aaPredicted RBP20.48■□□□□ 0.87
TRIM13-207ENST00000474805 SAMD9LQ8IVG5 1584 aa20.47■□□□□ 0.87
TRIM13-207ENST00000474805 ZNF335Q9H4Z2 1342 aaPredicted RBP20.47■□□□□ 0.87
TRIM13-207ENST00000474805 NPATQ14207 1427 aa20.46■□□□□ 0.87
TRIM13-207ENST00000474805 CLTCQ00610 1675 aaKnown RBP20.45■□□□□ 0.86
TRIM13-207ENST00000474805 CCDC18Q5T9S5 1454 aa20.45■□□□□ 0.86
TRIM13-207ENST00000474805 CASKIN1Q8WXD9 1431 aa20.44■□□□□ 0.86
TRIM13-207ENST00000474805 UBAP1LF5GYI3 381 aa20.44■□□□□ 0.86
TRIM13-207ENST00000474805 HNRNPMP52272 730 aaKnown RBP eCLIP20.43■□□□□ 0.86
TRIM13-207ENST00000474805 SPAG9O60271 1321 aaKnown RBP20.42■□□□□ 0.86
TRIM13-207ENST00000474805 SYCP2Q9BX26 1530 aa20.42■□□□□ 0.86
TRIM13-207ENST00000474805 MYO3AQ8NEV4 1616 aa20.4■□□□□ 0.86
TRIM13-207ENST00000474805 ZNF142P52746 1687 aaPredicted RBP20.39■□□□□ 0.86
TRIM13-207ENST00000474805 PKD2Q13563 968 aa20.38■□□□□ 0.85
TRIM13-207ENST00000474805 ATP7AQ04656 1500 aa20.37■□□□□ 0.85
TRIM13-207ENST00000474805 GPATCH8Q9UKJ3 1502 aaKnown RBP20.37■□□□□ 0.85
TRIM13-207ENST00000474805 GGT6Q6P531 493 aa20.37■□□□□ 0.85
TRIM13-207ENST00000474805 CEP170BQ9Y4F5 1589 aaPredicted RBP20.37■□□□□ 0.85
TRIM13-207ENST00000474805 PTPRKQ15262 1439 aa20.36■□□□□ 0.85
TRIM13-207ENST00000474805 PLA2R1Q13018 1463 aa20.36■□□□□ 0.85
TRIM13-207ENST00000474805 A2MP01023 1474 aa20.35■□□□□ 0.85
TRIM13-207ENST00000474805 TCOF1Q13428 1488 aaKnown RBP20.35■□□□□ 0.85
TRIM13-207ENST00000474805 PLXNC1O60486 1568 aa20.34■□□□□ 0.85
TRIM13-207ENST00000474805 INO80Q9ULG1 1556 aaPredicted RBP20.34■□□□□ 0.85
TRIM13-207ENST00000474805 FYCO1Q9BQS8 1478 aa20.32■□□□□ 0.84
TRIM13-207ENST00000474805 CFDP1Q9UEE9 299 aaPredicted RBP20.32■□□□□ 0.84
TRIM13-207ENST00000474805 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
TRIM13-207ENST00000474805 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
TRIM13-207ENST00000474805 KIAA1107Q9UPP5 1409 aa20.3■□□□□ 0.84
TRIM13-207ENST00000474805 ADGBQ8N7X0 1667 aa20.29■□□□□ 0.84
TRIM13-207ENST00000474805 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
TRIM13-207ENST00000474805 PLEKHH2Q8IVE3 1493 aa20.28■□□□□ 0.84
TRIM13-207ENST00000474805 DNMT1P26358 1616 aaKnown RBP20.27■□□□□ 0.84
TRIM13-207ENST00000474805 CCNB3Q8WWL7 1395 aa20.27■□□□□ 0.84
TRIM13-207ENST00000474805 PIP4K2BP78356 416 aa20.27■□□□□ 0.84
TRIM13-207ENST00000474805 HSPA1LP34931 641 aa20.26■□□□□ 0.83
TRIM13-207ENST00000474805 A2ML1A8K2U0 1454 aa20.25■□□□□ 0.83
TRIM13-207ENST00000474805 POLR1AO95602 1720 aaPredicted RBP20.24■□□□□ 0.83
TRIM13-207ENST00000474805 ZNF644Q9H582 1327 aaPredicted RBP20.24■□□□□ 0.83
TRIM13-207ENST00000474805 MED1Q15648 1581 aaPredicted RBP20.22■□□□□ 0.83
TRIM13-207ENST00000474805 TOM1O60784 492 aa20.21■□□□□ 0.83
TRIM13-207ENST00000474805 FBXO31Q5XUX0 539 aaPredicted RBP20.21■□□□□ 0.83
TRIM13-207ENST00000474805 NEURL4Q96JN8 1562 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms