RNA–Protein interactions for RNA: ENST00000474100.1

PSMB4-203, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 755 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-203ENST00000474100 ABCA9Q8IUA7 1624 aa12.26□□□□□ -0.45
PSMB4-203ENST00000474100 RIMS1Q86UR5 1692 aaKnown RBP12.26□□□□□ -0.45
PSMB4-203ENST00000474100 SOCS7O14512 581 aa12.25□□□□□ -0.45
PSMB4-203ENST00000474100 MLECQ14165 292 aa12.25□□□□□ -0.45
PSMB4-203ENST00000474100 ILDR2Q71H61 639 aa12.25□□□□□ -0.45
PSMB4-203ENST00000474100 POGZQ7Z3K3 1410 aa12.25□□□□□ -0.45
PSMB4-203ENST00000474100 FRMPD1Q5SYB0 1578 aa12.23□□□□□ -0.45
PSMB4-203ENST00000474100 DENND4BO75064 1496 aaPredicted RBP12.23□□□□□ -0.45
PSMB4-203ENST00000474100 ARHGEF40Q8TER5 1519 aa12.22□□□□□ -0.45
PSMB4-203ENST00000474100 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
PSMB4-203ENST00000474100 FANCAO15360 1455 aa12.21□□□□□ -0.45
PSMB4-203ENST00000474100 PRXQ9BXM0 1461 aa12.2□□□□□ -0.46
PSMB4-203ENST00000474100 PLEKHD1A6NEE1 506 aa12.19□□□□□ -0.46
PSMB4-203ENST00000474100 RANGAP1P46060 587 aaPredicted RBP12.18□□□□□ -0.46
PSMB4-203ENST00000474100 FHOD3Q2V2M9 1422 aa12.18□□□□□ -0.46
PSMB4-203ENST00000474100 RAPGEF6Q8TEU7 1601 aa12.17□□□□□ -0.46
PSMB4-203ENST00000474100 ABCB7O75027 752 aa12.16□□□□□ -0.46
PSMB4-203ENST00000474100 YEATS2Q9ULM3 1422 aa12.16□□□□□ -0.46
PSMB4-203ENST00000474100 ZFYVE16Q7Z3T8 1539 aa12.16□□□□□ -0.46
PSMB4-203ENST00000474100 EFCAB5A4FU69 1503 aa12.15□□□□□ -0.46
PSMB4-203ENST00000474100 RICTORQ6R327 1708 aa12.14□□□□□ -0.47
PSMB4-203ENST00000474100 NUP153P49790 1475 aaKnown RBP12.14□□□□□ -0.47
PSMB4-203ENST00000474100 CEBPAP49715 358 aaPredicted RBP12.13□□□□□ -0.47
PSMB4-203ENST00000474100 CFAP74Q9C0B2 1584 aa12.13□□□□□ -0.47
PSMB4-203ENST00000474100 MAGI2Q86UL8 1455 aa12.12□□□□□ -0.47
PSMB4-203ENST00000474100 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
PSMB4-203ENST00000474100 SAMD9Q5K651 1589 aa12.11□□□□□ -0.47
PSMB4-203ENST00000474100 SPATA31D1Q6ZQQ2 1576 aa12.11□□□□□ -0.47
PSMB4-203ENST00000474100 FER1L4A9Z1Z3 1794 aa12.1□□□□□ -0.47
PSMB4-203ENST00000474100 TTC37Q6PGP7 1564 aa12.1□□□□□ -0.47
PSMB4-203ENST00000474100 SCAPERQ9BY12 1400 aa12.1□□□□□ -0.47
PSMB4-203ENST00000474100 HECW1Q76N89 1606 aa12.09□□□□□ -0.47
PSMB4-203ENST00000474100 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
PSMB4-203ENST00000474100 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.09□□□□□ -0.47
PSMB4-203ENST00000474100 UHRF1BP1Q6BDS2 1440 aa12.09□□□□□ -0.47
PSMB4-203ENST00000474100 SIGLEC1Q9BZZ2 1709 aa12.08□□□□□ -0.47
PSMB4-203ENST00000474100 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
PSMB4-203ENST00000474100 C9orf84Q5VXU9 1444 aa12.07□□□□□ -0.48
PSMB4-203ENST00000474100 CSRNP3Q8WYN3 585 aa12.07□□□□□ -0.48
PSMB4-203ENST00000474100 ATP10AO60312 1499 aa12.07□□□□□ -0.48
PSMB4-203ENST00000474100 PREX1Q8TCU6 1659 aa12.06□□□□□ -0.48
PSMB4-203ENST00000474100 ARHGEF12Q9NZN5 1544 aa12.06□□□□□ -0.48
PSMB4-203ENST00000474100 EFCAB2Q5VUJ9 269 aa12.04□□□□□ -0.48
PSMB4-203ENST00000474100 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
PSMB4-203ENST00000474100 ATP1B4Q9UN42 357 aaPredicted RBP12.04□□□□□ -0.48
PSMB4-203ENST00000474100 PTPRTO14522 1441 aa12.03□□□□□ -0.48
PSMB4-203ENST00000474100 PLCH2O75038 1416 aa12.03□□□□□ -0.48
PSMB4-203ENST00000474100 STRCQ7RTU9 1775 aa12.01□□□□□ -0.49
PSMB4-203ENST00000474100 PLSCR2Q9NRY7 297 aa12.01□□□□□ -0.49
PSMB4-203ENST00000474100 CDK13Q14004 1512 aaKnown RBP12.01□□□□□ -0.49
PSMB4-203ENST00000474100 AFAP1Q8N556 730 aa11.99□□□□□ -0.49
PSMB4-203ENST00000474100 ZNF518AQ6AHZ1 1483 aa11.98□□□□□ -0.49
PSMB4-203ENST00000474100 EEA1Q15075 1411 aa11.98□□□□□ -0.49
PSMB4-203ENST00000474100 UBAP1LF5GYI3 381 aa11.98□□□□□ -0.49
PSMB4-203ENST00000474100 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
PSMB4-203ENST00000474100 APLP2Q06481 763 aa11.97□□□□□ -0.49
PSMB4-203ENST00000474100 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
PSMB4-203ENST00000474100 IQSEC2Q5JU85 1478 aa11.96□□□□□ -0.49
PSMB4-203ENST00000474100 TRAPPC8Q9Y2L5 1435 aa11.96□□□□□ -0.49
PSMB4-203ENST00000474100 HAX1O00165 279 aa11.96□□□□□ -0.49
PSMB4-203ENST00000474100 LTBP4Q8N2S1 1624 aa11.96□□□□□ -0.5
PSMB4-203ENST00000474100 ARHGAP5Q13017 1502 aa11.95□□□□□ -0.5
PSMB4-203ENST00000474100 NCOA1Q15788 1441 aa11.94□□□□□ -0.5
PSMB4-203ENST00000474100 SETD1BQ9UPS6 1966 aaKnown RBP11.94□□□□□ -0.5
PSMB4-203ENST00000474100 ZNF335Q9H4Z2 1342 aaPredicted RBP11.92□□□□□ -0.5
PSMB4-203ENST00000474100 NCKAP5LQ9HCH0 1330 aa11.92□□□□□ -0.5
PSMB4-203ENST00000474100 MYO5CQ9NQX4 1742 aa11.92□□□□□ -0.5
PSMB4-203ENST00000474100 DIP2CQ9Y2E4 1556 aa11.92□□□□□ -0.5
PSMB4-203ENST00000474100 C3P01024 1663 aa11.91□□□□□ -0.5
PSMB4-203ENST00000474100 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
PSMB4-203ENST00000474100 CLIP1P30622 1438 aa11.91□□□□□ -0.5
PSMB4-203ENST00000474100 KDM5CP41229 1560 aa11.91□□□□□ -0.5
PSMB4-203ENST00000474100 CNTLNQ9NXG0 1405 aa11.9□□□□□ -0.5
PSMB4-203ENST00000474100 KIF14Q15058 1648 aa11.89□□□□□ -0.51
PSMB4-203ENST00000474100 REREQ9P2R6 1566 aa11.89□□□□□ -0.51
PSMB4-203ENST00000474100 TROQ12816 1431 aaPredicted RBP11.89□□□□□ -0.51
PSMB4-203ENST00000474100 CAMSAP1Q5T5Y3 1602 aa11.89□□□□□ -0.51
PSMB4-203ENST00000474100 MLH3Q9UHC1 1453 aa11.89□□□□□ -0.51
PSMB4-203ENST00000474100 FMN1Q68DA7 1419 aa11.88□□□□□ -0.51
PSMB4-203ENST00000474100 AGLP35573 1532 aa11.88□□□□□ -0.51
PSMB4-203ENST00000474100 ABCA6Q8N139 1617 aa11.88□□□□□ -0.51
PSMB4-203ENST00000474100 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
PSMB4-203ENST00000474100 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
PSMB4-203ENST00000474100 PIP4K2BP78356 416 aa11.86□□□□□ -0.51
PSMB4-203ENST00000474100 PKD2Q13563 968 aa11.86□□□□□ -0.51
PSMB4-203ENST00000474100 NPATQ14207 1427 aa11.86□□□□□ -0.51
PSMB4-203ENST00000474100 ZMYM3Q14202 1370 aa11.85□□□□□ -0.51
PSMB4-203ENST00000474100 HSPA1LP34931 641 aa11.84□□□□□ -0.51
PSMB4-203ENST00000474100 ZNF777Q9ULD5 760 aaPredicted RBP11.83□□□□□ -0.52
PSMB4-203ENST00000474100 TOM1O60784 492 aa11.82□□□□□ -0.52
PSMB4-203ENST00000474100 ABCC1P33527 1531 aa11.81□□□□□ -0.52
PSMB4-203ENST00000474100 SPAG9O60271 1321 aaKnown RBP11.81□□□□□ -0.52
PSMB4-203ENST00000474100 MED1Q15648 1581 aaPredicted RBP11.8□□□□□ -0.52
PSMB4-203ENST00000474100 LOC105371045A0A1W2PR82 267 aa11.8□□□□□ -0.52
PSMB4-203ENST00000474100 GGT6Q6P531 493 aa11.8□□□□□ -0.52
PSMB4-203ENST00000474100 PLA2R1Q13018 1463 aa11.8□□□□□ -0.52
PSMB4-203ENST00000474100 ARHGAP35Q9NRY4 1499 aa11.8□□□□□ -0.52
PSMB4-203ENST00000474100 LHX8Q68G74 356 aa11.79□□□□□ -0.52
PSMB4-203ENST00000474100 TCOF1Q13428 1488 aaKnown RBP11.78□□□□□ -0.52
PSMB4-203ENST00000474100 CDC42BPBQ9Y5S2 1711 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms