RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 LTBP4Q8N2S1 1624 aa22.06■■□□□ 1.12
PCYT1A-214ENST00000473978 PTPRTO14522 1441 aa22.06■■□□□ 1.12
PCYT1A-214ENST00000473978 CFAP74Q9C0B2 1584 aa22.06■■□□□ 1.12
PCYT1A-214ENST00000473978 UHRF1BP1Q6BDS2 1440 aa22.06■■□□□ 1.12
PCYT1A-214ENST00000473978 NUP153P49790 1475 aaKnown RBP22.04■■□□□ 1.12
PCYT1A-214ENST00000473978 PRXQ9BXM0 1461 aa22.04■■□□□ 1.12
PCYT1A-214ENST00000473978 IQSEC2Q5JU85 1478 aa22.02■■□□□ 1.12
PCYT1A-214ENST00000473978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.02■■□□□ 1.11
PCYT1A-214ENST00000473978 PLEKHD1A6NEE1 506 aa22.01■■□□□ 1.11
PCYT1A-214ENST00000473978 ATP10AO60312 1499 aa22■■□□□ 1.11
PCYT1A-214ENST00000473978 SAMD9Q5K651 1589 aa21.98■■□□□ 1.11
PCYT1A-214ENST00000473978 SETD1BQ9UPS6 1966 aaKnown RBP21.98■■□□□ 1.11
PCYT1A-214ENST00000473978 C9orf84Q5VXU9 1444 aa21.97■■□□□ 1.11
PCYT1A-214ENST00000473978 SCAPERQ9BY12 1400 aa21.97■■□□□ 1.11
PCYT1A-214ENST00000473978 UBAP1LF5GYI3 381 aa21.89■■□□□ 1.1
PCYT1A-214ENST00000473978 NCOA1Q15788 1441 aa21.87■■□□□ 1.09
PCYT1A-214ENST00000473978 PLCH2O75038 1416 aa21.86■■□□□ 1.09
PCYT1A-214ENST00000473978 C3P01024 1663 aa21.85■■□□□ 1.09
PCYT1A-214ENST00000473978 ZNF335Q9H4Z2 1342 aaPredicted RBP21.82■■□□□ 1.08
PCYT1A-214ENST00000473978 TRAPPC8Q9Y2L5 1435 aa21.82■■□□□ 1.08
PCYT1A-214ENST00000473978 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
PCYT1A-214ENST00000473978 MED1Q15648 1581 aaPredicted RBP21.79■■□□□ 1.08
PCYT1A-214ENST00000473978 EFCAB2Q5VUJ9 269 aa21.78■■□□□ 1.08
PCYT1A-214ENST00000473978 AFAP1Q8N556 730 aa21.77■■□□□ 1.08
PCYT1A-214ENST00000473978 CAMSAP1Q5T5Y3 1602 aa21.76■■□□□ 1.07
PCYT1A-214ENST00000473978 NCKAP5LQ9HCH0 1330 aa21.76■■□□□ 1.07
PCYT1A-214ENST00000473978 ZNF518AQ6AHZ1 1483 aa21.76■■□□□ 1.07
PCYT1A-214ENST00000473978 CDK13Q14004 1512 aaKnown RBP21.75■■□□□ 1.07
PCYT1A-214ENST00000473978 DIP2CQ9Y2E4 1556 aa21.74■■□□□ 1.07
PCYT1A-214ENST00000473978 ESF1Q9H501 851 aaKnown RBP21.74■■□□□ 1.07
PCYT1A-214ENST00000473978 HSPA1LP34931 641 aa21.73■■□□□ 1.07
PCYT1A-214ENST00000473978 MYT1LQ9UL68 1186 aa21.73■■□□□ 1.07
PCYT1A-214ENST00000473978 KDM5CP41229 1560 aa21.73■■□□□ 1.07
PCYT1A-214ENST00000473978 REREQ9P2R6 1566 aa21.73■■□□□ 1.07
PCYT1A-214ENST00000473978 MYO5CQ9NQX4 1742 aa21.68■■□□□ 1.06
PCYT1A-214ENST00000473978 AGLP35573 1532 aa21.68■■□□□ 1.06
PCYT1A-214ENST00000473978 ABCA6Q8N139 1617 aa21.68■■□□□ 1.06
PCYT1A-214ENST00000473978 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
PCYT1A-214ENST00000473978 PIP4K2BP78356 416 aa21.65■■□□□ 1.06
PCYT1A-214ENST00000473978 CNTLNQ9NXG0 1405 aa21.65■■□□□ 1.06
PCYT1A-214ENST00000473978 CSRNP3Q8WYN3 585 aa21.64■■□□□ 1.06
PCYT1A-214ENST00000473978 MLH3Q9UHC1 1453 aa21.64■■□□□ 1.05
PCYT1A-214ENST00000473978 NPATQ14207 1427 aa21.64■■□□□ 1.05
PCYT1A-214ENST00000473978 PHF23Q9BUL5 403 aaPredicted RBP21.63■■□□□ 1.05
PCYT1A-214ENST00000473978 ARHGAP5Q13017 1502 aa21.62■■□□□ 1.05
PCYT1A-214ENST00000473978 PKD2Q13563 968 aa21.62■■□□□ 1.05
PCYT1A-214ENST00000473978 KIF14Q15058 1648 aa21.59■■□□□ 1.05
PCYT1A-214ENST00000473978 PLA2R1Q13018 1463 aa21.59■■□□□ 1.05
PCYT1A-214ENST00000473978 ZMYM3Q14202 1370 aa21.59■■□□□ 1.05
PCYT1A-214ENST00000473978 TCOF1Q13428 1488 aaKnown RBP21.59■■□□□ 1.05
PCYT1A-214ENST00000473978 TOM1O60784 492 aa21.57■■□□□ 1.04
PCYT1A-214ENST00000473978 PPP6R1Q9UPN7 881 aa21.57■■□□□ 1.04
PCYT1A-214ENST00000473978 MROH2AA6NES4 1674 aa21.55■■□□□ 1.04
PCYT1A-214ENST00000473978 ATP1B4Q9UN42 357 aaPredicted RBP21.55■■□□□ 1.04
PCYT1A-214ENST00000473978 ZNF142P52746 1687 aaPredicted RBP21.53■■□□□ 1.04
PCYT1A-214ENST00000473978 CDK11AQ9UQ88 783 aaPredicted RBP21.52■■□□□ 1.04
PCYT1A-214ENST00000473978 MYO3AQ8NEV4 1616 aa21.52■■□□□ 1.04
PCYT1A-214ENST00000473978 KIDINS220Q9ULH0 1771 aa21.51■■□□□ 1.03
PCYT1A-214ENST00000473978 SUPT6HQ7KZ85 1726 aaKnown RBP21.51■■□□□ 1.03
PCYT1A-214ENST00000473978 CEP170BQ9Y4F5 1589 aaPredicted RBP21.5■■□□□ 1.03
PCYT1A-214ENST00000473978 CDC42BPBQ9Y5S2 1711 aa21.49■■□□□ 1.03
PCYT1A-214ENST00000473978 TROQ12816 1431 aaPredicted RBP21.49■■□□□ 1.03
PCYT1A-214ENST00000473978 ABCC1P33527 1531 aa21.48■■□□□ 1.03
PCYT1A-214ENST00000473978 PTPRKQ15262 1439 aa21.46■■□□□ 1.03
PCYT1A-214ENST00000473978 CPS1P31327 1500 aa21.46■■□□□ 1.03
PCYT1A-214ENST00000473978 ITSN2Q9NZM3 1697 aa21.45■■□□□ 1.02
PCYT1A-214ENST00000473978 CLTCQ00610 1675 aaKnown RBP21.44■■□□□ 1.02
PCYT1A-214ENST00000473978 ALKQ9UM73 1620 aa21.43■■□□□ 1.02
PCYT1A-214ENST00000473978 SHANK2Q9UPX8 1470 aa21.43■■□□□ 1.02
PCYT1A-214ENST00000473978 CLIP1P30622 1438 aa21.43■■□□□ 1.02
PCYT1A-214ENST00000473978 RGS17Q9UGC6 210 aaPredicted RBP21.42■■□□□ 1.02
PCYT1A-214ENST00000473978 SENP3Q9H4L4 574 aaPredicted RBP21.4■■□□□ 1.02
PCYT1A-214ENST00000473978 FMN1Q68DA7 1419 aa21.4■■□□□ 1.02
PCYT1A-214ENST00000473978 PREX2Q70Z35 1606 aa21.39■■□□□ 1.01
PCYT1A-214ENST00000473978 DNMT1P26358 1616 aaKnown RBP21.38■■□□□ 1.01
PCYT1A-214ENST00000473978 A2ML1A8K2U0 1454 aa21.37■■□□□ 1.01
PCYT1A-214ENST00000473978 SAMD9LQ8IVG5 1584 aa21.37■■□□□ 1.01
PCYT1A-214ENST00000473978 NEURL4Q96JN8 1562 aa21.37■■□□□ 1.01
PCYT1A-214ENST00000473978 GGT6Q6P531 493 aa21.34■■□□□ 1.01
PCYT1A-214ENST00000473978 POLR1AO95602 1720 aaPredicted RBP21.33■■□□□ 1.01
PCYT1A-214ENST00000473978 SPAG9O60271 1321 aaKnown RBP21.33■■□□□ 1
PCYT1A-214ENST00000473978 VWDEQ8N2E2 1590 aa21.32■■□□□ 1
PCYT1A-214ENST00000473978 LRRIQ1Q96JM4 1722 aa21.32■■□□□ 1
PCYT1A-214ENST00000473978 EEA1Q15075 1411 aa21.32■■□□□ 1
PCYT1A-214ENST00000473978 PLXNC1O60486 1568 aa21.31■■□□□ 1
PCYT1A-214ENST00000473978 A2MP01023 1474 aa21.28■■□□□ 1
PCYT1A-214ENST00000473978 ARHGAP35Q9NRY4 1499 aa21.28■■□□□ 1
PCYT1A-214ENST00000473978 ZNF777Q9ULD5 760 aaPredicted RBP21.28■■□□□ 1
PCYT1A-214ENST00000473978 CDC42BPAQ5VT25 1732 aa21.27■■□□□ 1
PCYT1A-214ENST00000473978 HNRNPMP52272 730 aaKnown RBP eCLIP21.27■■□□□ 1
PCYT1A-214ENST00000473978 ATP7AQ04656 1500 aa21.26■□□□□ 0.99
PCYT1A-214ENST00000473978 SYCP2Q9BX26 1530 aa21.26■□□□□ 0.99
PCYT1A-214ENST00000473978 POTEAQ6S8J7 498 aa21.25■□□□□ 0.99
PCYT1A-214ENST00000473978 ANKLE2Q86XL3 938 aa21.25■□□□□ 0.99
PCYT1A-214ENST00000473978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.24■□□□□ 0.991e-6■■■■■ 48.1
PCYT1A-214ENST00000473978 FBXO31Q5XUX0 539 aaPredicted RBP21.23■□□□□ 0.99
PCYT1A-214ENST00000473978 INO80Q9ULG1 1556 aaPredicted RBP21.22■□□□□ 0.99
PCYT1A-214ENST00000473978 TNRQ92752 1358 aa21.21■□□□□ 0.99
PCYT1A-214ENST00000473978 LRRC7Q96NW7 1537 aa21.21■□□□□ 0.99
PCYT1A-214ENST00000473978 NPHP4O75161 1426 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms