RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 UHRF1BP1Q6BDS2 1440 aa18.32■□□□□ 0.52
SSBP1-209ENST00000473783 HECW1Q76N89 1606 aa18.32■□□□□ 0.52
SSBP1-209ENST00000473783 LTBP4Q8N2S1 1624 aa18.31■□□□□ 0.52
SSBP1-209ENST00000473783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
SSBP1-209ENST00000473783 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
SSBP1-209ENST00000473783 SAMD9Q5K651 1589 aa18.3■□□□□ 0.52
SSBP1-209ENST00000473783 PRXQ9BXM0 1461 aa18.29■□□□□ 0.52
SSBP1-209ENST00000473783 NUP153P49790 1475 aaKnown RBP18.28■□□□□ 0.52
SSBP1-209ENST00000473783 P3H3Q8IVL6 736 aa18.28■□□□□ 0.52
SSBP1-209ENST00000473783 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.28■□□□□ 0.52
SSBP1-209ENST00000473783 C9orf84Q5VXU9 1444 aa18.26■□□□□ 0.51
SSBP1-209ENST00000473783 ATP10AO60312 1499 aa18.26■□□□□ 0.51
SSBP1-209ENST00000473783 CEBPAP49715 358 aaPredicted RBP18.25■□□□□ 0.51
SSBP1-209ENST00000473783 PLEKHD1A6NEE1 506 aa18.23■□□□□ 0.51
SSBP1-209ENST00000473783 SCAPERQ9BY12 1400 aa18.2■□□□□ 0.5
SSBP1-209ENST00000473783 C3P01024 1663 aa18.18■□□□□ 0.5
SSBP1-209ENST00000473783 NCOA1Q15788 1441 aa18.15■□□□□ 0.5
SSBP1-209ENST00000473783 PLCH2O75038 1416 aa18.14■□□□□ 0.49
SSBP1-209ENST00000473783 REREQ9P2R6 1566 aa18.12■□□□□ 0.49
SSBP1-209ENST00000473783 TRAPPC8Q9Y2L5 1435 aa18.11■□□□□ 0.49
SSBP1-209ENST00000473783 ZNF518AQ6AHZ1 1483 aa18.11■□□□□ 0.49
SSBP1-209ENST00000473783 MYO5CQ9NQX4 1742 aa18.1■□□□□ 0.49
SSBP1-209ENST00000473783 KDM5CP41229 1560 aa18.1■□□□□ 0.49
SSBP1-209ENST00000473783 MED1Q15648 1581 aaPredicted RBP18.1■□□□□ 0.49
SSBP1-209ENST00000473783 UBAP1LF5GYI3 381 aa18.1■□□□□ 0.49
SSBP1-209ENST00000473783 DIP2CQ9Y2E4 1556 aa18.08■□□□□ 0.48
SSBP1-209ENST00000473783 CAMSAP1Q5T5Y3 1602 aa18.07■□□□□ 0.48
SSBP1-209ENST00000473783 AGLP35573 1532 aa18.06■□□□□ 0.48
SSBP1-209ENST00000473783 EFCAB2Q5VUJ9 269 aa18.05■□□□□ 0.48
SSBP1-209ENST00000473783 ZNF335Q9H4Z2 1342 aaPredicted RBP18.03■□□□□ 0.48
SSBP1-209ENST00000473783 ESF1Q9H501 851 aaKnown RBP18.03■□□□□ 0.48
SSBP1-209ENST00000473783 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
SSBP1-209ENST00000473783 ABCA6Q8N139 1617 aa18.02■□□□□ 0.48
SSBP1-209ENST00000473783 CDK13Q14004 1512 aaKnown RBP18.02■□□□□ 0.47
SSBP1-209ENST00000473783 MROH2AA6NES4 1674 aa18■□□□□ 0.47
SSBP1-209ENST00000473783 NPATQ14207 1427 aa18■□□□□ 0.47
SSBP1-209ENST00000473783 PLA2R1Q13018 1463 aa17.98■□□□□ 0.47
SSBP1-209ENST00000473783 MLH3Q9UHC1 1453 aa17.98■□□□□ 0.47
SSBP1-209ENST00000473783 ZNF142P52746 1687 aaPredicted RBP17.97■□□□□ 0.47
SSBP1-209ENST00000473783 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
SSBP1-209ENST00000473783 SUPT6HQ7KZ85 1726 aaKnown RBP17.97■□□□□ 0.47
SSBP1-209ENST00000473783 MYT1LQ9UL68 1186 aa17.96■□□□□ 0.47
SSBP1-209ENST00000473783 ARHGAP5Q13017 1502 aa17.95■□□□□ 0.46
SSBP1-209ENST00000473783 HSPA1LP34931 641 aa17.95■□□□□ 0.46
SSBP1-209ENST00000473783 PKD2Q13563 968 aa17.95■□□□□ 0.46
SSBP1-209ENST00000473783 NCKAP5LQ9HCH0 1330 aa17.95■□□□□ 0.46
SSBP1-209ENST00000473783 TCOF1Q13428 1488 aaKnown RBP17.94■□□□□ 0.46
SSBP1-209ENST00000473783 KIF14Q15058 1648 aa17.94■□□□□ 0.46
SSBP1-209ENST00000473783 MYO3AQ8NEV4 1616 aa17.92■□□□□ 0.46
SSBP1-209ENST00000473783 RANGAP1P46060 587 aaPredicted RBP17.92■□□□□ 0.46
SSBP1-209ENST00000473783 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
SSBP1-209ENST00000473783 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
SSBP1-209ENST00000473783 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
SSBP1-209ENST00000473783 CEP170BQ9Y4F5 1589 aaPredicted RBP17.89■□□□□ 0.45
SSBP1-209ENST00000473783 KIDINS220Q9ULH0 1771 aa17.89■□□□□ 0.45
SSBP1-209ENST00000473783 TOM1O60784 492 aa17.88■□□□□ 0.45
SSBP1-209ENST00000473783 CDC42BPBQ9Y5S2 1711 aa17.88■□□□□ 0.45
SSBP1-209ENST00000473783 CPS1P31327 1500 aa17.88■□□□□ 0.45
SSBP1-209ENST00000473783 ITSN2Q9NZM3 1697 aa17.87■□□□□ 0.45
SSBP1-209ENST00000473783 PIP4K2BP78356 416 aa17.87■□□□□ 0.45
SSBP1-209ENST00000473783 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
SSBP1-209ENST00000473783 CDK11AQ9UQ88 783 aaPredicted RBP17.87■□□□□ 0.45
SSBP1-209ENST00000473783 ZMYM3Q14202 1370 aa17.87■□□□□ 0.45
SSBP1-209ENST00000473783 ABCC1P33527 1531 aa17.87■□□□□ 0.45
SSBP1-209ENST00000473783 TROQ12816 1431 aaPredicted RBP17.84■□□□□ 0.45
SSBP1-209ENST00000473783 PREX2Q70Z35 1606 aa17.83■□□□□ 0.45
SSBP1-209ENST00000473783 CLIP1P30622 1438 aa17.83■□□□□ 0.45
SSBP1-209ENST00000473783 CLTCQ00610 1675 aaKnown RBP17.83■□□□□ 0.44
SSBP1-209ENST00000473783 POLR1AO95602 1720 aaPredicted RBP17.81■□□□□ 0.44
SSBP1-209ENST00000473783 PTPRKQ15262 1439 aa17.8■□□□□ 0.44
SSBP1-209ENST00000473783 FMN1Q68DA7 1419 aa17.8■□□□□ 0.44
SSBP1-209ENST00000473783 SHANK2Q9UPX8 1470 aa17.78■□□□□ 0.44
SSBP1-209ENST00000473783 EEA1Q15075 1411 aa17.77■□□□□ 0.44
SSBP1-209ENST00000473783 DNMT1P26358 1616 aaKnown RBP17.76■□□□□ 0.43
SSBP1-209ENST00000473783 ALKQ9UM73 1620 aa17.76■□□□□ 0.43
SSBP1-209ENST00000473783 A2ML1A8K2U0 1454 aa17.76■□□□□ 0.43
SSBP1-209ENST00000473783 ATP1B4Q9UN42 357 aaPredicted RBP17.76■□□□□ 0.43
SSBP1-209ENST00000473783 SAMD9LQ8IVG5 1584 aa17.75■□□□□ 0.43
SSBP1-209ENST00000473783 NEURL4Q96JN8 1562 aa17.75■□□□□ 0.43
SSBP1-209ENST00000473783 PLXNC1O60486 1568 aa17.74■□□□□ 0.43
SSBP1-209ENST00000473783 LRRIQ1Q96JM4 1722 aa17.72■□□□□ 0.43
SSBP1-209ENST00000473783 CDC42BPAQ5VT25 1732 aa17.72■□□□□ 0.43
SSBP1-209ENST00000473783 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
SSBP1-209ENST00000473783 ATP7AQ04656 1500 aa17.68■□□□□ 0.42
SSBP1-209ENST00000473783 RGS17Q9UGC6 210 aaPredicted RBP17.67■□□□□ 0.42
SSBP1-209ENST00000473783 A2MP01023 1474 aa17.67■□□□□ 0.42
SSBP1-209ENST00000473783 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
SSBP1-209ENST00000473783 INO80Q9ULG1 1556 aaPredicted RBP17.66■□□□□ 0.42
SSBP1-209ENST00000473783 RNF17Q9BXT8 1623 aaKnown RBP17.66■□□□□ 0.42
SSBP1-209ENST00000473783 SYCP2Q9BX26 1530 aa17.66■□□□□ 0.42
SSBP1-209ENST00000473783 ARHGAP35Q9NRY4 1499 aa17.64■□□□□ 0.41
SSBP1-209ENST00000473783 SYNMO15061 1565 aa17.63■□□□□ 0.41
SSBP1-209ENST00000473783 DEPDC5O75140 1603 aa17.63■□□□□ 0.41
SSBP1-209ENST00000473783 GGT6Q6P531 493 aa17.63■□□□□ 0.41
SSBP1-209ENST00000473783 ADGBQ8N7X0 1667 aa17.63■□□□□ 0.41
SSBP1-209ENST00000473783 MED14O60244 1454 aa17.62■□□□□ 0.41
SSBP1-209ENST00000473783 ANKLE2Q86XL3 938 aa17.61■□□□□ 0.41
SSBP1-209ENST00000473783 CCDC18Q5T9S5 1454 aa17.6■□□□□ 0.41
SSBP1-209ENST00000473783 STRCP1A6NGW2 1772 aa17.6■□□□□ 0.41
SSBP1-209ENST00000473783 IQGAP1P46940 1657 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms