RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 FER1L4A9Z1Z3 1794 aa27.75■■■□□ 2.03
HPS4-210ENST00000473782 CEBPAP49715 358 aaPredicted RBP27.73■■■□□ 2.03
HPS4-210ENST00000473782 STRCQ7RTU9 1775 aa27.71■■■□□ 2.03
HPS4-210ENST00000473782 CSRNP3Q8WYN3 585 aa27.71■■■□□ 2.03
HPS4-210ENST00000473782 SCAPERQ9BY12 1400 aa27.69■■■□□ 2.02
HPS4-210ENST00000473782 ATP10AO60312 1499 aa27.68■■■□□ 2.02
HPS4-210ENST00000473782 PREX1Q8TCU6 1659 aa27.67■■■□□ 2.02
HPS4-210ENST00000473782 PLCH2O75038 1416 aa27.67■■■□□ 2.02
HPS4-210ENST00000473782 RANGAP1P46060 587 aaPredicted RBP27.66■■■□□ 2.02
HPS4-210ENST00000473782 C9orf84Q5VXU9 1444 aa27.63■■■□□ 2.01
HPS4-210ENST00000473782 DMRT2Q9Y5R5 561 aa27.62■■■□□ 2.01
HPS4-210ENST00000473782 CDK13Q14004 1512 aaKnown RBP27.58■■■□□ 2.01
HPS4-210ENST00000473782 SPATA31D1Q6ZQQ2 1576 aa27.56■■■□□ 2
HPS4-210ENST00000473782 PTPRTO14522 1441 aa27.55■■■□□ 2
HPS4-210ENST00000473782 UHRF1BP1Q6BDS2 1440 aa27.54■■■□□ 2
HPS4-210ENST00000473782 LTBP4Q8N2S1 1624 aa27.53■■■□□ 2
HPS4-210ENST00000473782 EFCAB2Q5VUJ9 269 aa27.5■■□□□ 1.99
HPS4-210ENST00000473782 SETD1BQ9UPS6 1966 aaKnown RBP27.49■■□□□ 1.99
HPS4-210ENST00000473782 AFAP1Q8N556 730 aa27.49■■□□□ 1.99
HPS4-210ENST00000473782 KDM5CP41229 1560 aa27.46■■□□□ 1.99
HPS4-210ENST00000473782 ZNF518AQ6AHZ1 1483 aa27.44■■□□□ 1.98
HPS4-210ENST00000473782 DIP2CQ9Y2E4 1556 aa27.42■■□□□ 1.98
HPS4-210ENST00000473782 C3P01024 1663 aa27.41■■□□□ 1.98
HPS4-210ENST00000473782 IQSEC2Q5JU85 1478 aa27.4■■□□□ 1.98
HPS4-210ENST00000473782 REREQ9P2R6 1566 aa27.39■■□□□ 1.98
HPS4-210ENST00000473782 MYO5CQ9NQX4 1742 aa27.39■■□□□ 1.98
HPS4-210ENST00000473782 KIF14Q15058 1648 aa27.38■■□□□ 1.97
HPS4-210ENST00000473782 NCOA1Q15788 1441 aa27.38■■□□□ 1.97
HPS4-210ENST00000473782 TRAPPC8Q9Y2L5 1435 aa27.37■■□□□ 1.97
HPS4-210ENST00000473782 EEA1Q15075 1411 aa27.35■■□□□ 1.97
HPS4-210ENST00000473782 ABCA6Q8N139 1617 aa27.34■■□□□ 1.97
HPS4-210ENST00000473782 MLH3Q9UHC1 1453 aa27.34■■□□□ 1.97
HPS4-210ENST00000473782 AGLP35573 1532 aa27.33■■□□□ 1.97
HPS4-210ENST00000473782 ARHGAP5Q13017 1502 aa27.31■■□□□ 1.96
HPS4-210ENST00000473782 TROQ12816 1431 aaPredicted RBP27.29■■□□□ 1.96
HPS4-210ENST00000473782 ATP1B4Q9UN42 357 aaPredicted RBP27.27■■□□□ 1.96
HPS4-210ENST00000473782 MYT1LQ9UL68 1186 aa27.26■■□□□ 1.95
HPS4-210ENST00000473782 CDK11AQ9UQ88 783 aaPredicted RBP27.25■■□□□ 1.95
HPS4-210ENST00000473782 FMN1Q68DA7 1419 aa27.24■■□□□ 1.95
HPS4-210ENST00000473782 ZNF335Q9H4Z2 1342 aaPredicted RBP27.23■■□□□ 1.95
HPS4-210ENST00000473782 CAMSAP1Q5T5Y3 1602 aa27.23■■□□□ 1.95
HPS4-210ENST00000473782 CDC42BPBQ9Y5S2 1711 aa27.22■■□□□ 1.95
HPS4-210ENST00000473782 ARHGAP35Q9NRY4 1499 aa27.22■■□□□ 1.95
HPS4-210ENST00000473782 NCKAP5LQ9HCH0 1330 aa27.21■■□□□ 1.95
HPS4-210ENST00000473782 ESF1Q9H501 851 aaKnown RBP27.2■■□□□ 1.94
HPS4-210ENST00000473782 CNTLNQ9NXG0 1405 aa27.2■■□□□ 1.94
HPS4-210ENST00000473782 ABCC1P33527 1531 aa27.19■■□□□ 1.94
HPS4-210ENST00000473782 NPATQ14207 1427 aa27.18■■□□□ 1.94
HPS4-210ENST00000473782 KIDINS220Q9ULH0 1771 aa27.18■■□□□ 1.94
HPS4-210ENST00000473782 UBAP1LF5GYI3 381 aa27.18■■□□□ 1.94
HPS4-210ENST00000473782 LRRIQ1Q96JM4 1722 aa27.16■■□□□ 1.94
HPS4-210ENST00000473782 ZMYM3Q14202 1370 aa27.16■■□□□ 1.94
HPS4-210ENST00000473782 CLIP1P30622 1438 aa27.14■■□□□ 1.93
HPS4-210ENST00000473782 ITSN2Q9NZM3 1697 aa27.12■■□□□ 1.93
HPS4-210ENST00000473782 PREX2Q70Z35 1606 aa27.11■■□□□ 1.93
HPS4-210ENST00000473782 MROH2AA6NES4 1674 aa27.09■■□□□ 1.93
HPS4-210ENST00000473782 TCOF1Q13428 1488 aaKnown RBP27.08■■□□□ 1.93
HPS4-210ENST00000473782 PLA2R1Q13018 1463 aa27.07■■□□□ 1.92
HPS4-210ENST00000473782 PKD2Q13563 968 aa27.06■■□□□ 1.92
HPS4-210ENST00000473782 EHMT2Q96KQ7 1210 aa27.06■■□□□ 1.92
HPS4-210ENST00000473782 SAMD9LQ8IVG5 1584 aa27.05■■□□□ 1.92
HPS4-210ENST00000473782 UBTFP17480 764 aaKnown RBP27.04■■□□□ 1.92
HPS4-210ENST00000473782 PTPRKQ15262 1439 aa27.04■■□□□ 1.92
HPS4-210ENST00000473782 ZNF142P52746 1687 aaPredicted RBP27.01■■□□□ 1.92
HPS4-210ENST00000473782 HSPA1LP34931 641 aa27.01■■□□□ 1.91
HPS4-210ENST00000473782 MYO3AQ8NEV4 1616 aa27.01■■□□□ 1.91
HPS4-210ENST00000473782 CEP170BQ9Y4F5 1589 aaPredicted RBP26.99■■□□□ 1.91
HPS4-210ENST00000473782 MED1Q15648 1581 aaPredicted RBP26.98■■□□□ 1.91
HPS4-210ENST00000473782 CDC42BPAQ5VT25 1732 aa26.98■■□□□ 1.91
HPS4-210ENST00000473782 CLTCQ00610 1675 aaKnown RBP26.96■■□□□ 1.91
HPS4-210ENST00000473782 PLXNC1O60486 1568 aa26.96■■□□□ 1.91
HPS4-210ENST00000473782 PPP6R1Q9UPN7 881 aa26.95■■□□□ 1.9
HPS4-210ENST00000473782 SUPT6HQ7KZ85 1726 aaKnown RBP26.95■■□□□ 1.9
HPS4-210ENST00000473782 SPAG9O60271 1321 aaKnown RBP26.94■■□□□ 1.9
HPS4-210ENST00000473782 HNRNPMP52272 730 aaKnown RBP eCLIP26.94■■□□□ 1.9
HPS4-210ENST00000473782 SYCP2Q9BX26 1530 aa26.93■■□□□ 1.9
HPS4-210ENST00000473782 CASKIN1Q8WXD9 1431 aa26.92■■□□□ 1.9
HPS4-210ENST00000473782 ZNF777Q9ULD5 760 aaPredicted RBP26.91■■□□□ 1.9
HPS4-210ENST00000473782 GPATCH8Q9UKJ3 1502 aaKnown RBP26.9■■□□□ 1.9
HPS4-210ENST00000473782 A2MP01023 1474 aa26.89■■□□□ 1.9
HPS4-210ENST00000473782 CCDC18Q5T9S5 1454 aa26.89■■□□□ 1.9
HPS4-210ENST00000473782 PIP4K2BP78356 416 aa26.89■■□□□ 1.9
HPS4-210ENST00000473782 ATP7AQ04656 1500 aa26.88■■□□□ 1.89
HPS4-210ENST00000473782 GGT6Q6P531 493 aa26.87■■□□□ 1.89
HPS4-210ENST00000473782 INO80Q9ULG1 1556 aaPredicted RBP26.86■■□□□ 1.89
HPS4-210ENST00000473782 DNMT1P26358 1616 aaKnown RBP26.86■■□□□ 1.89
HPS4-210ENST00000473782 A2ML1A8K2U0 1454 aa26.86■■□□□ 1.89
HPS4-210ENST00000473782 KIAA1107Q9UPP5 1409 aa26.85■■□□□ 1.89
HPS4-210ENST00000473782 SCAF1Q9H7N4 1312 aaKnown RBP26.84■■□□□ 1.89
HPS4-210ENST00000473782 NEURL4Q96JN8 1562 aa26.84■■□□□ 1.89
HPS4-210ENST00000473782 ALKQ9UM73 1620 aa26.83■■□□□ 1.89
HPS4-210ENST00000473782 TOM1O60784 492 aa26.83■■□□□ 1.89
HPS4-210ENST00000473782 SHANK2Q9UPX8 1470 aa26.81■■□□□ 1.88
HPS4-210ENST00000473782 CPS1P31327 1500 aa26.81■■□□□ 1.88
HPS4-210ENST00000473782 FBXO31Q5XUX0 539 aaPredicted RBP26.76■■□□□ 1.87
HPS4-210ENST00000473782 VWDEQ8N2E2 1590 aa26.75■■□□□ 1.87
HPS4-210ENST00000473782 CFDP1Q9UEE9 299 aaPredicted RBP26.74■■□□□ 1.87
HPS4-210ENST00000473782 PLEKHH2Q8IVE3 1493 aa26.74■■□□□ 1.87
HPS4-210ENST00000473782 FYCO1Q9BQS8 1478 aa26.71■■□□□ 1.87
HPS4-210ENST00000473782 POLR1AO95602 1720 aaPredicted RBP26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms