RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 CCDC7Q96M83 1385 aa19.57■□□□□ 0.72
NHLRC3-204ENST00000473371 AKNAQ7Z591 1439 aa19.57■□□□□ 0.72
NHLRC3-204ENST00000473371 KDM6BO15054 1643 aa19.56■□□□□ 0.72
NHLRC3-204ENST00000473371 C11orf95C9JLR9 678 aaPredicted RBP19.56■□□□□ 0.72
NHLRC3-204ENST00000473371 FOXD1Q16676 465 aa19.55■□□□□ 0.72
NHLRC3-204ENST00000473371 NCOA1Q15788 1441 aa19.54■□□□□ 0.72
NHLRC3-204ENST00000473371 ZBED9Q6R2W3 1325 aa19.52■□□□□ 0.71
NHLRC3-204ENST00000473371 B4GALNT3Q6L9W6 998 aa19.5■□□□□ 0.71
NHLRC3-204ENST00000473371 MIA2Q96PC5 1412 aa19.49■□□□□ 0.71
NHLRC3-204ENST00000473371 NBPF8Q3BBV2 869 aa19.48■□□□□ 0.71
NHLRC3-204ENST00000473371 EPRSP07814 1512 aaKnown RBP19.48■□□□□ 0.71
NHLRC3-204ENST00000473371 ARID3CA6NKF2 412 aa19.47■□□□□ 0.71
NHLRC3-204ENST00000473371 IFT140Q96RY7 1462 aa19.47■□□□□ 0.71
NHLRC3-204ENST00000473371 CDK13Q14004 1512 aaKnown RBP19.45■□□□□ 0.7
NHLRC3-204ENST00000473371 ANKRD30BQ9BXX2 1392 aa19.45■□□□□ 0.7
NHLRC3-204ENST00000473371 KIF7Q2M1P5 1343 aa19.45■□□□□ 0.7
NHLRC3-204ENST00000473371 SLC24A1O60721 1099 aa19.45■□□□□ 0.7
NHLRC3-204ENST00000473371 RPRD2Q5VT52 1461 aaKnown RBP19.45■□□□□ 0.7
NHLRC3-204ENST00000473371 EIF4G3O43432 1585 aaKnown RBP19.41■□□□□ 0.7
NHLRC3-204ENST00000473371 SLC4A1APQ9BWU0 796 aaKnown RBP19.41■□□□□ 0.7
NHLRC3-204ENST00000473371 TEX14Q8IWB6 1497 aa19.41■□□□□ 0.7
NHLRC3-204ENST00000473371 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
NHLRC3-204ENST00000473371 DAPK1P53355 1430 aa19.4■□□□□ 0.7
NHLRC3-204ENST00000473371 IQGAP2Q13576 1575 aa19.39■□□□□ 0.69
NHLRC3-204ENST00000473371 ROCK1Q13464 1354 aa19.39■□□□□ 0.69
NHLRC3-204ENST00000473371 SPATA31E1Q6ZUB1 1445 aa19.39■□□□□ 0.69
NHLRC3-204ENST00000473371 POLR1AO95602 1720 aaPredicted RBP19.37■□□□□ 0.69
NHLRC3-204ENST00000473371 CNGB1Q14028 1251 aaPredicted RBP19.36■□□□□ 0.69
NHLRC3-204ENST00000473371 ABCC5O15440 1437 aa19.35■□□□□ 0.69
NHLRC3-204ENST00000473371 POLR3GLQ9BT43 218 aa19.34■□□□□ 0.69
NHLRC3-204ENST00000473371 MYT1LQ9UL68 1186 aa19.34■□□□□ 0.69
NHLRC3-204ENST00000473371 SMG6Q86US8 1419 aaKnown RBP19.33■□□□□ 0.69
NHLRC3-204ENST00000473371 ZNF644Q9H582 1327 aaPredicted RBP19.33■□□□□ 0.68
NHLRC3-204ENST00000473371 DNMT1P26358 1616 aaKnown RBP19.33■□□□□ 0.68
NHLRC3-204ENST00000473371 NUDCQ9Y266 331 aa19.3■□□□□ 0.68
NHLRC3-204ENST00000473371 ZNF326Q5BKZ1 582 aaKnown RBP19.29■□□□□ 0.68
NHLRC3-204ENST00000473371 NOP58Q9Y2X3 529 aaKnown RBP19.29■□□□□ 0.68
NHLRC3-204ENST00000473371 DHX29Q7Z478 1369 aaKnown RBP19.29■□□□□ 0.68
NHLRC3-204ENST00000473371 CCDC136Q96JN2 1154 aa19.27■□□□□ 0.68
NHLRC3-204ENST00000473371 USP47Q96K76 1375 aa19.26■□□□□ 0.67
NHLRC3-204ENST00000473371 PZPP20742 1482 aa19.25■□□□□ 0.67
NHLRC3-204ENST00000473371 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
NHLRC3-204ENST00000473371 DEKP35659 375 aaKnown RBP19.23■□□□□ 0.67
NHLRC3-204ENST00000473371 RNF123Q5XPI4 1314 aa19.23■□□□□ 0.67
NHLRC3-204ENST00000473371 BCORL1Q5H9F3 1711 aa19.22■□□□□ 0.67
NHLRC3-204ENST00000473371 SENP3-EIF4A1A0A087X0R7 540 aa19.22■□□□□ 0.67
NHLRC3-204ENST00000473371 MBD5Q9P267 1494 aa19.21■□□□□ 0.67
NHLRC3-204ENST00000473371 MAGI1Q96QZ7 1491 aaPredicted RBP19.21■□□□□ 0.67
NHLRC3-204ENST00000473371 PAK3O75914 559 aaPredicted RBP19.2■□□□□ 0.66
NHLRC3-204ENST00000473371 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
NHLRC3-204ENST00000473371 KIAA1107Q9UPP5 1409 aa19.2■□□□□ 0.66
NHLRC3-204ENST00000473371 NUP153P49790 1475 aaKnown RBP19.2■□□□□ 0.66
NHLRC3-204ENST00000473371 NBR1Q14596 966 aa19.19■□□□□ 0.66
NHLRC3-204ENST00000473371 ARID4BQ4LE39 1312 aaPredicted RBP19.19■□□□□ 0.66
NHLRC3-204ENST00000473371 ANP32AP39687 249 aaKnown RBP19.19■□□□□ 0.66
NHLRC3-204ENST00000473371 CFDP1Q9UEE9 299 aaPredicted RBP19.19■□□□□ 0.66
NHLRC3-204ENST00000473371 PKD2Q13563 968 aa19.19■□□□□ 0.66
NHLRC3-204ENST00000473371 PNISRQ8TF01 805 aaKnown RBP19.18■□□□□ 0.66
NHLRC3-204ENST00000473371 ZNF608Q9ULD9 1512 aaPredicted RBP19.18■□□□□ 0.66
NHLRC3-204ENST00000473371 CAMSAP2Q08AD1 1489 aa19.17■□□□□ 0.66
NHLRC3-204ENST00000473371 KIAA0556O60303 1618 aa19.17■□□□□ 0.66
NHLRC3-204ENST00000473371 KIF14Q15058 1648 aa19.17■□□□□ 0.66
NHLRC3-204ENST00000473371 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
NHLRC3-204ENST00000473371 RAPGEF6Q8TEU7 1601 aa19.16■□□□□ 0.66
NHLRC3-204ENST00000473371 ROCK2O75116 1388 aaKnown RBP19.15■□□□□ 0.66
NHLRC3-204ENST00000473371 KDM5CP41229 1560 aa19.15■□□□□ 0.66
NHLRC3-204ENST00000473371 DISP1Q96F81 1524 aa19.15■□□□□ 0.66
NHLRC3-204ENST00000473371 ADGBQ8N7X0 1667 aa19.14■□□□□ 0.65
NHLRC3-204ENST00000473371 IPO9Q96P70 1041 aaKnown RBP19.14■□□□□ 0.65
NHLRC3-204ENST00000473371 PRG4Q92954 1404 aaPredicted RBP19.14■□□□□ 0.65
NHLRC3-204ENST00000473371 KIAA0586Q9BVV6 1533 aa19.13■□□□□ 0.65
NHLRC3-204ENST00000473371 CARD11Q9BXL7 1154 aa19.12■□□□□ 0.65
NHLRC3-204ENST00000473371 TROQ12816 1431 aaPredicted RBP19.12■□□□□ 0.65
NHLRC3-204ENST00000473371 KIF15Q9NS87 1388 aa19.11■□□□□ 0.65
NHLRC3-204ENST00000473371 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
NHLRC3-204ENST00000473371 ZBTB47Q9UFB7 747 aaPredicted RBP19.11■□□□□ 0.65
NHLRC3-204ENST00000473371 ANKRD30AQ9BXX3 1397 aa19.1■□□□□ 0.65
NHLRC3-204ENST00000473371 ITSN2Q9NZM3 1697 aa19.1■□□□□ 0.65
NHLRC3-204ENST00000473371 ADGRL2O95490 1459 aa19.09■□□□□ 0.65
NHLRC3-204ENST00000473371 RALGAPBQ86X10 1494 aa19.09■□□□□ 0.65
NHLRC3-204ENST00000473371 GPATCH8Q9UKJ3 1502 aaKnown RBP19.09■□□□□ 0.65
NHLRC3-204ENST00000473371 UHRF1BP1Q6BDS2 1440 aa19.08■□□□□ 0.64
NHLRC3-204ENST00000473371 CHD1O14646 1710 aa19.07■□□□□ 0.64
NHLRC3-204ENST00000473371 ANKRD50Q9ULJ7 1429 aa19.07■□□□□ 0.64
NHLRC3-204ENST00000473371 MYBBP1AQ9BQG0 1328 aaKnown RBP19.07■□□□□ 0.64
NHLRC3-204ENST00000473371 KDM2AQ9Y2K7 1162 aa19.06■□□□□ 0.64
NHLRC3-204ENST00000473371 BRD4O60885 1362 aaPredicted RBP19.06■□□□□ 0.64
NHLRC3-204ENST00000473371 LRPPRCP42704 1394 aaKnown RBP19.06■□□□□ 0.64
NHLRC3-204ENST00000473371 RTL5Q5HYW3 569 aaPredicted RBP19.06■□□□□ 0.64
NHLRC3-204ENST00000473371 NUP155O75694 1391 aa19.05■□□□□ 0.64
NHLRC3-204ENST00000473371 ST20-MTHFSA0A0A6YYL1 179 aa19.05■□□□□ 0.64
NHLRC3-204ENST00000473371 RALBP1Q15311 655 aa19.05■□□□□ 0.64
NHLRC3-204ENST00000473371 CROCC2H7BZ55 1655 aa19.05■□□□□ 0.64
NHLRC3-204ENST00000473371 CEP170Q5SW79 1584 aa19.05■□□□□ 0.64
NHLRC3-204ENST00000473371 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
NHLRC3-204ENST00000473371 RRP1P56182 461 aaKnown RBP19.04■□□□□ 0.64
NHLRC3-204ENST00000473371 NUP160Q12769 1436 aa19.03■□□□□ 0.64
NHLRC3-204ENST00000473371 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
NHLRC3-204ENST00000473371 EXOC6Q8TAG9 804 aa19.02■□□□□ 0.63
NHLRC3-204ENST00000473371 ARHGEF12Q9NZN5 1544 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms