RNA–Protein interactions for RNA: ENST00000473003.5

RAPGEF4-208, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 4

Gene RAPGEF4, Length 593 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-208ENST00000473003 CTTNBP2Q8WZ74 1663 aa14.28□□□□□ -0.12
RAPGEF4-208ENST00000473003 NCOA1Q15788 1441 aa14.27□□□□□ -0.12
RAPGEF4-208ENST00000473003 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
RAPGEF4-208ENST00000473003 HECW1Q76N89 1606 aa14.25□□□□□ -0.13
RAPGEF4-208ENST00000473003 SETD1BQ9UPS6 1966 aaKnown RBP14.23□□□□□ -0.13
RAPGEF4-208ENST00000473003 C9orf84Q5VXU9 1444 aa14.23□□□□□ -0.13
RAPGEF4-208ENST00000473003 PHF23Q9BUL5 403 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF4-208ENST00000473003 ATP10AO60312 1499 aa14.21□□□□□ -0.13
RAPGEF4-208ENST00000473003 HSPA1LP34931 641 aa14.21□□□□□ -0.13
RAPGEF4-208ENST00000473003 ZNF335Q9H4Z2 1342 aaPredicted RBP14.19□□□□□ -0.14
RAPGEF4-208ENST00000473003 FAM9AQ8IZU1 332 aaPredicted RBP14.17□□□□□ -0.14
RAPGEF4-208ENST00000473003 C3P01024 1663 aa14.17□□□□□ -0.14
RAPGEF4-208ENST00000473003 RAPGEF6Q8TEU7 1601 aa14.16□□□□□ -0.14
RAPGEF4-208ENST00000473003 TRAPPC8Q9Y2L5 1435 aa14.15□□□□□ -0.14
RAPGEF4-208ENST00000473003 CAMSAP1Q5T5Y3 1602 aa14.15□□□□□ -0.14
RAPGEF4-208ENST00000473003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.15□□□□□ -0.14
RAPGEF4-208ENST00000473003 SCAPERQ9BY12 1400 aa14.13□□□□□ -0.15
RAPGEF4-208ENST00000473003 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
RAPGEF4-208ENST00000473003 NUP153P49790 1475 aaKnown RBP14.12□□□□□ -0.15
RAPGEF4-208ENST00000473003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF4-208ENST00000473003 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
RAPGEF4-208ENST00000473003 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF4-208ENST00000473003 PIP4K2BP78356 416 aa14.09□□□□□ -0.15
RAPGEF4-208ENST00000473003 REREQ9P2R6 1566 aa14.09□□□□□ -0.15
RAPGEF4-208ENST00000473003 P3H3Q8IVL6 736 aa14.08□□□□□ -0.16
RAPGEF4-208ENST00000473003 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
RAPGEF4-208ENST00000473003 PLA2R1Q13018 1463 aa14.07□□□□□ -0.16
RAPGEF4-208ENST00000473003 TOM1O60784 492 aa14.06□□□□□ -0.16
RAPGEF4-208ENST00000473003 NPATQ14207 1427 aa14.06□□□□□ -0.16
RAPGEF4-208ENST00000473003 TCOF1Q13428 1488 aaKnown RBP14.06□□□□□ -0.16
RAPGEF4-208ENST00000473003 SAMD9Q5K651 1589 aa14.05□□□□□ -0.16
RAPGEF4-208ENST00000473003 PLEKHD1A6NEE1 506 aa14.05□□□□□ -0.16
RAPGEF4-208ENST00000473003 AGLP35573 1532 aa14.05□□□□□ -0.16
RAPGEF4-208ENST00000473003 DIP2CQ9Y2E4 1556 aa14.05□□□□□ -0.16
RAPGEF4-208ENST00000473003 PKD2Q13563 968 aa14.04□□□□□ -0.16
RAPGEF4-208ENST00000473003 CNTLNQ9NXG0 1405 aa14.04□□□□□ -0.16
RAPGEF4-208ENST00000473003 KDM5CP41229 1560 aa14.04□□□□□ -0.16
RAPGEF4-208ENST00000473003 PLCH2O75038 1416 aa14.03□□□□□ -0.16
RAPGEF4-208ENST00000473003 ZNF518AQ6AHZ1 1483 aa14.03□□□□□ -0.16
RAPGEF4-208ENST00000473003 CPS1P31327 1500 aa14.02□□□□□ -0.16
RAPGEF4-208ENST00000473003 ESF1Q9H501 851 aaKnown RBP14.02□□□□□ -0.17
RAPGEF4-208ENST00000473003 ZNF142P52746 1687 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF4-208ENST00000473003 RGS17Q9UGC6 210 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF4-208ENST00000473003 PRXQ9BXM0 1461 aa14□□□□□ -0.17
RAPGEF4-208ENST00000473003 PPP6R1Q9UPN7 881 aa14□□□□□ -0.17
RAPGEF4-208ENST00000473003 ABCA6Q8N139 1617 aa14□□□□□ -0.17
RAPGEF4-208ENST00000473003 ALKQ9UM73 1620 aa14□□□□□ -0.17
RAPGEF4-208ENST00000473003 PTPRKQ15262 1439 aa13.98□□□□□ -0.17
RAPGEF4-208ENST00000473003 MYO3AQ8NEV4 1616 aa13.98□□□□□ -0.17
RAPGEF4-208ENST00000473003 MROH2AA6NES4 1674 aa13.98□□□□□ -0.17
RAPGEF4-208ENST00000473003 CEP170BQ9Y4F5 1589 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF4-208ENST00000473003 EFCAB2Q5VUJ9 269 aa13.95□□□□□ -0.18
RAPGEF4-208ENST00000473003 MLH3Q9UHC1 1453 aa13.94□□□□□ -0.18
RAPGEF4-208ENST00000473003 SHANK2Q9UPX8 1470 aa13.94□□□□□ -0.18
RAPGEF4-208ENST00000473003 SUPT6HQ7KZ85 1726 aaKnown RBP13.93□□□□□ -0.18
RAPGEF4-208ENST00000473003 MYO5CQ9NQX4 1742 aa13.93□□□□□ -0.18
RAPGEF4-208ENST00000473003 AFAP1Q8N556 730 aa13.93□□□□□ -0.18
RAPGEF4-208ENST00000473003 MYT1LQ9UL68 1186 aa13.91□□□□□ -0.18
RAPGEF4-208ENST00000473003 ZMYM3Q14202 1370 aa13.91□□□□□ -0.18
RAPGEF4-208ENST00000473003 NEURL4Q96JN8 1562 aa13.89□□□□□ -0.19
RAPGEF4-208ENST00000473003 POTEAQ6S8J7 498 aa13.89□□□□□ -0.19
RAPGEF4-208ENST00000473003 SETD1AO15047 1707 aaKnown RBP13.89□□□□□ -0.19
RAPGEF4-208ENST00000473003 CDK13Q14004 1512 aaKnown RBP13.89□□□□□ -0.19
RAPGEF4-208ENST00000473003 VWDEQ8N2E2 1590 aa13.88□□□□□ -0.19
RAPGEF4-208ENST00000473003 ARHGAP5Q13017 1502 aa13.87□□□□□ -0.19
RAPGEF4-208ENST00000473003 POLR1AO95602 1720 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF4-208ENST00000473003 RNF17Q9BXT8 1623 aaKnown RBP13.85□□□□□ -0.19
RAPGEF4-208ENST00000473003 A2ML1A8K2U0 1454 aa13.85□□□□□ -0.19
RAPGEF4-208ENST00000473003 SRCAPQ6ZRS2 3230 aa13.84□□□□□ -0.19
RAPGEF4-208ENST00000473003 DNMT1P26358 1616 aaKnown RBP13.84□□□□□ -0.19
RAPGEF4-208ENST00000473003 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.2
RAPGEF4-208ENST00000473003 KIF14Q15058 1648 aa13.82□□□□□ -0.2
RAPGEF4-208ENST00000473003 CLTCQ00610 1675 aaKnown RBP13.82□□□□□ -0.2
RAPGEF4-208ENST00000473003 ABCC1P33527 1531 aa13.81□□□□□ -0.2
RAPGEF4-208ENST00000473003 SYNMO15061 1565 aa13.79□□□□□ -0.2
RAPGEF4-208ENST00000473003 LRRC7Q96NW7 1537 aa13.79□□□□□ -0.2
RAPGEF4-208ENST00000473003 ITSN2Q9NZM3 1697 aa13.79□□□□□ -0.2
RAPGEF4-208ENST00000473003 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.21
RAPGEF4-208ENST00000473003 PLXNC1O60486 1568 aa13.75□□□□□ -0.21
RAPGEF4-208ENST00000473003 MED14O60244 1454 aa13.74□□□□□ -0.21
RAPGEF4-208ENST00000473003 NPHP4O75161 1426 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF4-208ENST00000473003 CDC42BPBQ9Y5S2 1711 aa13.74□□□□□ -0.21
RAPGEF4-208ENST00000473003 DEPDC5O75140 1603 aa13.74□□□□□ -0.21
RAPGEF4-208ENST00000473003 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF4-208ENST00000473003 STRCP1A6NGW2 1772 aa13.73□□□□□ -0.21
RAPGEF4-208ENST00000473003 RANGAP1P46060 587 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF4-208ENST00000473003 PREX2Q70Z35 1606 aa13.72□□□□□ -0.21
RAPGEF4-208ENST00000473003 SAMD9LQ8IVG5 1584 aa13.72□□□□□ -0.21
RAPGEF4-208ENST00000473003 ANKLE2Q86XL3 938 aa13.71□□□□□ -0.21
RAPGEF4-208ENST00000473003 CLIP1P30622 1438 aa13.71□□□□□ -0.22
RAPGEF4-208ENST00000473003 IQGAP1P46940 1657 aa13.7□□□□□ -0.22
RAPGEF4-208ENST00000473003 CDK11AQ9UQ88 783 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF4-208ENST00000473003 TNRQ92752 1358 aa13.69□□□□□ -0.22
RAPGEF4-208ENST00000473003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.69□□□□□ -0.22
RAPGEF4-208ENST00000473003 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
RAPGEF4-208ENST00000473003 A2MP01023 1474 aa13.67□□□□□ -0.22
RAPGEF4-208ENST00000473003 ATP7AQ04656 1500 aa13.66□□□□□ -0.22
RAPGEF4-208ENST00000473003 GGT6Q6P531 493 aa13.65□□□□□ -0.22
RAPGEF4-208ENST00000473003 INO80Q9ULG1 1556 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF4-208ENST00000473003 SPAG9O60271 1321 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms