RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 ARHGEF12Q9NZN5 1544 aa23.54■■□□□ 1.36
ABCF3-209ENST00000472608 HECW1Q76N89 1606 aa23.53■■□□□ 1.36
ABCF3-209ENST00000472608 MLECQ14165 292 aa23.52■■□□□ 1.36
ABCF3-209ENST00000472608 FER1L4A9Z1Z3 1794 aa23.52■■□□□ 1.36
ABCF3-209ENST00000472608 DMRT2Q9Y5R5 561 aa23.5■■□□□ 1.35
ABCF3-209ENST00000472608 ATP10AO60312 1499 aa23.49■■□□□ 1.35
ABCF3-209ENST00000472608 PLCH2O75038 1416 aa23.48■■□□□ 1.35
ABCF3-209ENST00000472608 SCAPERQ9BY12 1400 aa23.48■■□□□ 1.35
ABCF3-209ENST00000472608 PREX1Q8TCU6 1659 aa23.48■■□□□ 1.35
ABCF3-209ENST00000472608 STRCQ7RTU9 1775 aa23.45■■□□□ 1.34
ABCF3-209ENST00000472608 C9orf84Q5VXU9 1444 aa23.44■■□□□ 1.34
ABCF3-209ENST00000472608 CEBPAP49715 358 aaPredicted RBP23.43■■□□□ 1.34
ABCF3-209ENST00000472608 SETD1BQ9UPS6 1966 aaKnown RBP23.4■■□□□ 1.34
ABCF3-209ENST00000472608 PTPRTO14522 1441 aa23.39■■□□□ 1.33
ABCF3-209ENST00000472608 UHRF1BP1Q6BDS2 1440 aa23.38■■□□□ 1.33
ABCF3-209ENST00000472608 RANGAP1P46060 587 aaPredicted RBP23.36■■□□□ 1.33
ABCF3-209ENST00000472608 EFCAB2Q5VUJ9 269 aa23.36■■□□□ 1.33
ABCF3-209ENST00000472608 CDK13Q14004 1512 aaKnown RBP23.34■■□□□ 1.33
ABCF3-209ENST00000472608 SPATA31D1Q6ZQQ2 1576 aa23.32■■□□□ 1.32
ABCF3-209ENST00000472608 ZNF518AQ6AHZ1 1483 aa23.31■■□□□ 1.32
ABCF3-209ENST00000472608 IQSEC2Q5JU85 1478 aa23.3■■□□□ 1.32
ABCF3-209ENST00000472608 LTBP4Q8N2S1 1624 aa23.3■■□□□ 1.32
ABCF3-209ENST00000472608 KDM5CP41229 1560 aa23.3■■□□□ 1.32
ABCF3-209ENST00000472608 REREQ9P2R6 1566 aa23.28■■□□□ 1.32
ABCF3-209ENST00000472608 UBTFP17480 764 aaKnown RBP23.27■■□□□ 1.32
ABCF3-209ENST00000472608 AFAP1Q8N556 730 aa23.27■■□□□ 1.32
ABCF3-209ENST00000472608 MYO5CQ9NQX4 1742 aa23.25■■□□□ 1.31
ABCF3-209ENST00000472608 TRAPPC8Q9Y2L5 1435 aa23.24■■□□□ 1.31
ABCF3-209ENST00000472608 DIP2CQ9Y2E4 1556 aa23.23■■□□□ 1.31
ABCF3-209ENST00000472608 CDK11AQ9UQ88 783 aaPredicted RBP23.22■■□□□ 1.31
ABCF3-209ENST00000472608 MLH3Q9UHC1 1453 aa23.22■■□□□ 1.31
ABCF3-209ENST00000472608 AGLP35573 1532 aa23.22■■□□□ 1.31
ABCF3-209ENST00000472608 NCOA1Q15788 1441 aa23.21■■□□□ 1.31
ABCF3-209ENST00000472608 C3P01024 1663 aa23.21■■□□□ 1.31
ABCF3-209ENST00000472608 TROQ12816 1431 aaPredicted RBP23.17■■□□□ 1.3
ABCF3-209ENST00000472608 FMN1Q68DA7 1419 aa23.17■■□□□ 1.3
ABCF3-209ENST00000472608 EHMT2Q96KQ7 1210 aa23.17■■□□□ 1.3
ABCF3-209ENST00000472608 KIF14Q15058 1648 aa23.17■■□□□ 1.3
ABCF3-209ENST00000472608 ARHGAP5Q13017 1502 aa23.16■■□□□ 1.3
ABCF3-209ENST00000472608 ABCA6Q8N139 1617 aa23.15■■□□□ 1.3
ABCF3-209ENST00000472608 CNTLNQ9NXG0 1405 aa23.14■■□□□ 1.29
ABCF3-209ENST00000472608 ESF1Q9H501 851 aaKnown RBP23.12■■□□□ 1.29
ABCF3-209ENST00000472608 MYT1LQ9UL68 1186 aa23.12■■□□□ 1.29
ABCF3-209ENST00000472608 NPATQ14207 1427 aa23.1■■□□□ 1.29
ABCF3-209ENST00000472608 ATP1B4Q9UN42 357 aaPredicted RBP23.1■■□□□ 1.29
ABCF3-209ENST00000472608 CLIP1P30622 1438 aa23.09■■□□□ 1.29
ABCF3-209ENST00000472608 ARHGAP35Q9NRY4 1499 aa23.07■■□□□ 1.28
ABCF3-209ENST00000472608 CDC42BPBQ9Y5S2 1711 aa23.07■■□□□ 1.28
ABCF3-209ENST00000472608 CAMSAP1Q5T5Y3 1602 aa23.06■■□□□ 1.28
ABCF3-209ENST00000472608 ABCC1P33527 1531 aa23.06■■□□□ 1.28
ABCF3-209ENST00000472608 KIDINS220Q9ULH0 1771 aa23.03■■□□□ 1.28
ABCF3-209ENST00000472608 ZNF335Q9H4Z2 1342 aaPredicted RBP23.03■■□□□ 1.28
ABCF3-209ENST00000472608 ZMYM3Q14202 1370 aa23.02■■□□□ 1.28
ABCF3-209ENST00000472608 UBAP1LF5GYI3 381 aa23.02■■□□□ 1.28
ABCF3-209ENST00000472608 MROH2AA6NES4 1674 aa23.02■■□□□ 1.28
ABCF3-209ENST00000472608 NCKAP5LQ9HCH0 1330 aa23.01■■□□□ 1.27
ABCF3-209ENST00000472608 PREX2Q70Z35 1606 aa23■■□□□ 1.27
ABCF3-209ENST00000472608 ITSN2Q9NZM3 1697 aa23■■□□□ 1.27
ABCF3-209ENST00000472608 PLA2R1Q13018 1463 aa22.99■■□□□ 1.27
ABCF3-209ENST00000472608 PKD2Q13563 968 aa22.99■■□□□ 1.27
ABCF3-209ENST00000472608 TCOF1Q13428 1488 aaKnown RBP22.97■■□□□ 1.27
ABCF3-209ENST00000472608 LRRIQ1Q96JM4 1722 aa22.96■■□□□ 1.27
ABCF3-209ENST00000472608 SAMD9LQ8IVG5 1584 aa22.93■■□□□ 1.26
ABCF3-209ENST00000472608 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
ABCF3-209ENST00000472608 ZNF142P52746 1687 aaPredicted RBP22.93■■□□□ 1.26
ABCF3-209ENST00000472608 PTPRKQ15262 1439 aa22.91■■□□□ 1.26
ABCF3-209ENST00000472608 CEP170BQ9Y4F5 1589 aaPredicted RBP22.89■■□□□ 1.25
ABCF3-209ENST00000472608 CCDC18Q5T9S5 1454 aa22.88■■□□□ 1.25
ABCF3-209ENST00000472608 MYO3AQ8NEV4 1616 aa22.88■■□□□ 1.25
ABCF3-209ENST00000472608 SPAG9O60271 1321 aaKnown RBP22.87■■□□□ 1.25
ABCF3-209ENST00000472608 CASKIN1Q8WXD9 1431 aa22.87■■□□□ 1.25
ABCF3-209ENST00000472608 CDC42BPAQ5VT25 1732 aa22.87■■□□□ 1.25
ABCF3-209ENST00000472608 PLXNC1O60486 1568 aa22.86■■□□□ 1.25
ABCF3-209ENST00000472608 PPP6R1Q9UPN7 881 aa22.86■■□□□ 1.25
ABCF3-209ENST00000472608 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
ABCF3-209ENST00000472608 HSPA1LP34931 641 aa22.84■■□□□ 1.25
ABCF3-209ENST00000472608 CLTCQ00610 1675 aaKnown RBP22.84■■□□□ 1.25
ABCF3-209ENST00000472608 MED1Q15648 1581 aaPredicted RBP22.83■■□□□ 1.25
ABCF3-209ENST00000472608 KIAA1107Q9UPP5 1409 aa22.82■■□□□ 1.24
ABCF3-209ENST00000472608 A2MP01023 1474 aa22.82■■□□□ 1.24
ABCF3-209ENST00000472608 SUPT6HQ7KZ85 1726 aaKnown RBP22.82■■□□□ 1.24
ABCF3-209ENST00000472608 SYCP2Q9BX26 1530 aa22.82■■□□□ 1.24
ABCF3-209ENST00000472608 GPATCH8Q9UKJ3 1502 aaKnown RBP22.82■■□□□ 1.24
ABCF3-209ENST00000472608 HNRNPMP52272 730 aaKnown RBP eCLIP22.81■■□□□ 1.24
ABCF3-209ENST00000472608 ATP7AQ04656 1500 aa22.81■■□□□ 1.24
ABCF3-209ENST00000472608 A2ML1A8K2U0 1454 aa22.79■■□□□ 1.24
ABCF3-209ENST00000472608 TOM1O60784 492 aa22.79■■□□□ 1.24
ABCF3-209ENST00000472608 ZNF777Q9ULD5 760 aaPredicted RBP22.79■■□□□ 1.24
ABCF3-209ENST00000472608 INO80Q9ULG1 1556 aaPredicted RBP22.78■■□□□ 1.24
ABCF3-209ENST00000472608 CPS1P31327 1500 aa22.77■■□□□ 1.24
ABCF3-209ENST00000472608 GGT6Q6P531 493 aa22.77■■□□□ 1.24
ABCF3-209ENST00000472608 DNMT1P26358 1616 aaKnown RBP22.76■■□□□ 1.23
ABCF3-209ENST00000472608 PLEKHH2Q8IVE3 1493 aa22.76■■□□□ 1.23
ABCF3-209ENST00000472608 PIP4K2BP78356 416 aa22.74■■□□□ 1.23
ABCF3-209ENST00000472608 SHANK2Q9UPX8 1470 aa22.73■■□□□ 1.23
ABCF3-209ENST00000472608 NEURL4Q96JN8 1562 aa22.72■■□□□ 1.23
ABCF3-209ENST00000472608 FYCO1Q9BQS8 1478 aa22.71■■□□□ 1.23
ABCF3-209ENST00000472608 CFDP1Q9UEE9 299 aaPredicted RBP22.7■■□□□ 1.22
ABCF3-209ENST00000472608 SCAF1Q9H7N4 1312 aaKnown RBP22.7■■□□□ 1.22
ABCF3-209ENST00000472608 ADGBQ8N7X0 1667 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms