RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 ITSN2Q9NZM3 1697 aa15.09■□□□□ 0.01
APLF-204ENST00000471727 ARID3CA6NKF2 412 aa15.09■□□□□ 0.01
APLF-204ENST00000471727 MPHOSPH9Q99550 1183 aa15.09■□□□□ 0.01
APLF-204ENST00000471727 PLB1Q6P1J6 1458 aa15.08■□□□□ 0.01
APLF-204ENST00000471727 PLEKHD1A6NEE1 506 aa15.08■□□□□ 0
APLF-204ENST00000471727 CFDP1Q9UEE9 299 aaPredicted RBP15.08■□□□□ 0
APLF-204ENST00000471727 PRG4Q92954 1404 aaPredicted RBP15.08■□□□□ 0
APLF-204ENST00000471727 ABCA8O94911 1581 aa15.07■□□□□ 0
APLF-204ENST00000471727 GPATCH8Q9UKJ3 1502 aaKnown RBP15.06■□□□□ 0
APLF-204ENST00000471727 ADGRL2O95490 1459 aa15.04■□□□□ -0
APLF-204ENST00000471727 CAMSAP2Q08AD1 1489 aa15.04■□□□□ -0
APLF-204ENST00000471727 DDX10Q13206 875 aaKnown RBP15.03■□□□□ -0
APLF-204ENST00000471727 DENND4BO75064 1496 aaPredicted RBP15.02■□□□□ -0
APLF-204ENST00000471727 CCER2I3L3R5 266 aa15.02□□□□□ -0.01
APLF-204ENST00000471727 ATP10BO94823 1461 aa15.02□□□□□ -0.01
APLF-204ENST00000471727 ZNF644Q9H582 1327 aaPredicted RBP15.01□□□□□ -0.01
APLF-204ENST00000471727 ANKRD30AQ9BXX3 1397 aa15.01□□□□□ -0.01
APLF-204ENST00000471727 PTPRGP23470 1445 aa15.01□□□□□ -0.01
APLF-204ENST00000471727 NCOA1Q15788 1441 aa15.01□□□□□ -0.01
APLF-204ENST00000471727 KDM5BQ9UGL1 1544 aa15.01□□□□□ -0.01
APLF-204ENST00000471727 KDM6BO15054 1643 aa15□□□□□ -0.01
APLF-204ENST00000471727 ANKRD30BQ9BXX2 1392 aa15□□□□□ -0.01
APLF-204ENST00000471727 KIF14Q15058 1648 aa15□□□□□ -0.01
APLF-204ENST00000471727 ABCC10Q5T3U5 1492 aa14.99□□□□□ -0.01
APLF-204ENST00000471727 ANP32CO43423 234 aa14.99□□□□□ -0.01
APLF-204ENST00000471727 SHANK2Q9UPX8 1470 aa14.98□□□□□ -0.01
APLF-204ENST00000471727 ADGBQ8N7X0 1667 aa14.98□□□□□ -0.01
APLF-204ENST00000471727 RPRD2Q5VT52 1461 aaKnown RBP14.98□□□□□ -0.01
APLF-204ENST00000471727 SLC4A1APQ9BWU0 796 aaKnown RBP14.97□□□□□ -0.01
APLF-204ENST00000471727 RSPH4AQ5TD94 716 aa14.96□□□□□ -0.01
APLF-204ENST00000471727 EIF4G2P78344 907 aaKnown RBP eCLIP14.95□□□□□ -0.02
APLF-204ENST00000471727 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
APLF-204ENST00000471727 TSPY4P0CV99 314 aa14.93□□□□□ -0.02
APLF-204ENST00000471727 TSPY10P0CW01 314 aa14.93□□□□□ -0.02
APLF-204ENST00000471727 L3MBTL2Q969R5 705 aa14.93□□□□□ -0.02
APLF-204ENST00000471727 CROCC2H7BZ55 1655 aa14.93□□□□□ -0.02
APLF-204ENST00000471727 ANKRD50Q9ULJ7 1429 aa14.91□□□□□ -0.02
APLF-204ENST00000471727 KIAA1107Q9UPP5 1409 aa14.91□□□□□ -0.02
APLF-204ENST00000471727 SHROOM2Q13796 1616 aa14.91□□□□□ -0.02
APLF-204ENST00000471727 PZPP20742 1482 aa14.91□□□□□ -0.02
APLF-204ENST00000471727 ARHGEF5Q12774 1597 aa14.91□□□□□ -0.02
APLF-204ENST00000471727 C9orf84Q5VXU9 1444 aa14.9□□□□□ -0.02
APLF-204ENST00000471727 CDC42BPAQ5VT25 1732 aa14.89□□□□□ -0.03
APLF-204ENST00000471727 HSPA5P11021 654 aaKnown RBP14.89□□□□□ -0.03
APLF-204ENST00000471727 HIRIP3Q9BW71 556 aaPredicted RBP14.88□□□□□ -0.03
APLF-204ENST00000471727 TEX14Q8IWB6 1497 aa14.88□□□□□ -0.03
APLF-204ENST00000471727 KDM5DQ9BY66 1539 aa14.86□□□□□ -0.03
APLF-204ENST00000471727 CHD1O14646 1710 aa14.86□□□□□ -0.03
APLF-204ENST00000471727 FOXD1Q16676 465 aa14.85□□□□□ -0.03
APLF-204ENST00000471727 MBD5Q9P267 1494 aa14.85□□□□□ -0.03
APLF-204ENST00000471727 CCDC141Q6ZP82 1450 aa14.84□□□□□ -0.03
APLF-204ENST00000471727 PLEKHH2Q8IVE3 1493 aa14.84□□□□□ -0.03
APLF-204ENST00000471727 ABCC2Q92887 1545 aa14.83□□□□□ -0.04
APLF-204ENST00000471727 PKD2Q13563 968 aa14.83□□□□□ -0.04
APLF-204ENST00000471727 PREX2Q70Z35 1606 aa14.82□□□□□ -0.04
APLF-204ENST00000471727 WASHC2AQ641Q2 1341 aa14.82□□□□□ -0.04
APLF-204ENST00000471727 NUP155O75694 1391 aa14.82□□□□□ -0.04
APLF-204ENST00000471727 KIF15Q9NS87 1388 aa14.81□□□□□ -0.04
APLF-204ENST00000471727 UHRF1BP1LA0JNW5 1464 aa14.81□□□□□ -0.04
APLF-204ENST00000471727 KCNH8Q96L42 1107 aa14.81□□□□□ -0.04
APLF-204ENST00000471727 HNRNPMP52272 730 aaKnown RBP eCLIP14.8□□□□□ -0.04
APLF-204ENST00000471727 NBPF8Q3BBV2 869 aa14.8□□□□□ -0.04
APLF-204ENST00000471727 MAST1Q9Y2H9 1570 aa14.79□□□□□ -0.04
APLF-204ENST00000471727 SPATA31E1Q6ZUB1 1445 aa14.79□□□□□ -0.04
APLF-204ENST00000471727 CNTLNQ9NXG0 1405 aa14.79□□□□□ -0.04
APLF-204ENST00000471727 CCDC7Q96M83 1385 aa14.79□□□□□ -0.04
APLF-204ENST00000471727 ARID4BQ4LE39 1312 aaPredicted RBP14.78□□□□□ -0.04
APLF-204ENST00000471727 UHRF1BP1Q6BDS2 1440 aa14.78□□□□□ -0.04
APLF-204ENST00000471727 SAMD9LQ8IVG5 1584 aa14.77□□□□□ -0.04
APLF-204ENST00000471727 ARHGEF12Q9NZN5 1544 aa14.77□□□□□ -0.05
APLF-204ENST00000471727 CLASP1Q7Z460 1538 aa14.76□□□□□ -0.05
APLF-204ENST00000471727 CDC42BPBQ9Y5S2 1711 aa14.76□□□□□ -0.05
APLF-204ENST00000471727 SUPT16HQ9Y5B9 1047 aaKnown RBP14.75□□□□□ -0.05
APLF-204ENST00000471727 ARHGAP5Q13017 1502 aa14.75□□□□□ -0.05
APLF-204ENST00000471727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.75□□□□□ -0.05
APLF-204ENST00000471727 PLCH2O75038 1416 aa14.73□□□□□ -0.05
APLF-204ENST00000471727 EFCAB2Q5VUJ9 269 aa14.72□□□□□ -0.05
APLF-204ENST00000471727 PLXNC1O60486 1568 aa14.7□□□□□ -0.06
APLF-204ENST00000471727 MYO5CQ9NQX4 1742 aa14.7□□□□□ -0.06
APLF-204ENST00000471727 SYCP2Q9BX26 1530 aa14.7□□□□□ -0.06
APLF-204ENST00000471727 TTC37Q6PGP7 1564 aa14.7□□□□□ -0.06
APLF-204ENST00000471727 RALGAPBQ86X10 1494 aa14.7□□□□□ -0.06
APLF-204ENST00000471727 KIF7Q2M1P5 1343 aa14.69□□□□□ -0.06
APLF-204ENST00000471727 POLR1AO95602 1720 aaPredicted RBP14.69□□□□□ -0.06
APLF-204ENST00000471727 ARAP3Q8WWN8 1544 aa14.69□□□□□ -0.06
APLF-204ENST00000471727 FAM135AQ9P2D6 1515 aa14.69□□□□□ -0.06
APLF-204ENST00000471727 ERCC6L2Q5T890 1561 aa14.69□□□□□ -0.06
APLF-204ENST00000471727 ROCK2O75116 1388 aaKnown RBP14.68□□□□□ -0.06
APLF-204ENST00000471727 USP47Q96K76 1375 aa14.68□□□□□ -0.06
APLF-204ENST00000471727 DUOX2Q9NRD8 1548 aa14.68□□□□□ -0.06
APLF-204ENST00000471727 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
APLF-204ENST00000471727 PRKRIP1Q9H875 184 aaPredicted RBP14.68□□□□□ -0.06
APLF-204ENST00000471727 UNC13BO14795 1591 aa14.67□□□□□ -0.06
APLF-204ENST00000471727 ERBINQ96RT1 1412 aa14.67□□□□□ -0.06
APLF-204ENST00000471727 NEFLP07196 543 aa14.66□□□□□ -0.06
APLF-204ENST00000471727 ZCCHC11Q5TAX3 1644 aaKnown RBP14.65□□□□□ -0.06
APLF-204ENST00000471727 CCDC144AA2RUR9 1427 aa14.64□□□□□ -0.07
APLF-204ENST00000471727 RTEL1-TNFRSF6BF6WH68 1400 aa14.64□□□□□ -0.07
APLF-204ENST00000471727 ATP10AO60312 1499 aa14.63□□□□□ -0.07
APLF-204ENST00000471727 KDM5CP41229 1560 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms