RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 NEFLP07196 543 aa15.14■□□□□ 0.01
CHMP2B-203ENST00000471660 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
CHMP2B-203ENST00000471660 IGF1RP08069 1367 aa15.14■□□□□ 0.01
CHMP2B-203ENST00000471660 CARMIL2Q6F5E8 1435 aa15.14■□□□□ 0.01
CHMP2B-203ENST00000471660 WDR7Q9Y4E6 1490 aa15.13■□□□□ 0.01
CHMP2B-203ENST00000471660 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
CHMP2B-203ENST00000471660 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
CHMP2B-203ENST00000471660 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
CHMP2B-203ENST00000471660 CD109Q6YHK3 1445 aa15.08■□□□□ 0
CHMP2B-203ENST00000471660 EFCAB5A4FU69 1503 aa15.07■□□□□ 0
CHMP2B-203ENST00000471660 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
CHMP2B-203ENST00000471660 PHLDB1Q86UU1 1377 aa15.04■□□□□ -0
CHMP2B-203ENST00000471660 CDK11AQ9UQ88 783 aaPredicted RBP15.04■□□□□ -0
CHMP2B-203ENST00000471660 HSPA2P54652 639 aa15.03■□□□□ -0
CHMP2B-203ENST00000471660 PREX1Q8TCU6 1659 aa15.02■□□□□ -0
CHMP2B-203ENST00000471660 PKNOX2Q96KN3 472 aa15.02□□□□□ -0.01
CHMP2B-203ENST00000471660 CTTNBP2Q8WZ74 1663 aa15.01□□□□□ -0.01
CHMP2B-203ENST00000471660 ITGAEP38570 1179 aa15□□□□□ -0.01
CHMP2B-203ENST00000471660 ARHGAP35Q9NRY4 1499 aa15□□□□□ -0.01
CHMP2B-203ENST00000471660 ARHGEF40Q8TER5 1519 aa15□□□□□ -0.01
CHMP2B-203ENST00000471660 IQGAP2Q13576 1575 aa15□□□□□ -0.01
CHMP2B-203ENST00000471660 STRCQ7RTU9 1775 aa14.99□□□□□ -0.01
CHMP2B-203ENST00000471660 DMRT2Q9Y5R5 561 aa14.99□□□□□ -0.01
CHMP2B-203ENST00000471660 TTC37Q6PGP7 1564 aa14.98□□□□□ -0.01
CHMP2B-203ENST00000471660 YEATS2Q9ULM3 1422 aa14.98□□□□□ -0.01
CHMP2B-203ENST00000471660 DAXXQ9UER7 740 aaPredicted RBP14.98□□□□□ -0.01
CHMP2B-203ENST00000471660 MED1Q15648 1581 aaPredicted RBP14.97□□□□□ -0.01
CHMP2B-203ENST00000471660 NOP58Q9Y2X3 529 aaKnown RBP14.96□□□□□ -0.01
CHMP2B-203ENST00000471660 FRMPD1Q5SYB0 1578 aa14.96□□□□□ -0.01
CHMP2B-203ENST00000471660 LTBP4Q8N2S1 1624 aa14.96□□□□□ -0.01
CHMP2B-203ENST00000471660 PTPRTO14522 1441 aa14.96□□□□□ -0.01
CHMP2B-203ENST00000471660 DISP1Q96F81 1524 aa14.96□□□□□ -0.01
CHMP2B-203ENST00000471660 IL27Q8NEV9 243 aa14.96□□□□□ -0.02
CHMP2B-203ENST00000471660 KCNH8Q96L42 1107 aa14.93□□□□□ -0.02
CHMP2B-203ENST00000471660 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.93□□□□□ -0.02
CHMP2B-203ENST00000471660 FER1L4A9Z1Z3 1794 aa14.92□□□□□ -0.02
CHMP2B-203ENST00000471660 POGZQ7Z3K3 1410 aa14.91□□□□□ -0.02
CHMP2B-203ENST00000471660 C11orf95C9JLR9 678 aaPredicted RBP14.91□□□□□ -0.02
CHMP2B-203ENST00000471660 RRBP1Q9P2E9 1410 aaKnown RBP14.91□□□□□ -0.02
CHMP2B-203ENST00000471660 NEO1Q92859 1461 aa14.91□□□□□ -0.02
CHMP2B-203ENST00000471660 UGGT2Q9NYU1 1516 aa14.9□□□□□ -0.02
CHMP2B-203ENST00000471660 FANCAO15360 1455 aa14.9□□□□□ -0.02
CHMP2B-203ENST00000471660 KIAA0556O60303 1618 aa14.9□□□□□ -0.02
CHMP2B-203ENST00000471660 FYCO1Q9BQS8 1478 aa14.89□□□□□ -0.03
CHMP2B-203ENST00000471660 TIAM1Q13009 1591 aa14.89□□□□□ -0.03
CHMP2B-203ENST00000471660 ABCA9Q8IUA7 1624 aa14.88□□□□□ -0.03
CHMP2B-203ENST00000471660 DHX57Q6P158 1386 aaKnown RBP14.88□□□□□ -0.03
CHMP2B-203ENST00000471660 ARID4BQ4LE39 1312 aaPredicted RBP14.87□□□□□ -0.03
CHMP2B-203ENST00000471660 FMN1Q68DA7 1419 aa14.87□□□□□ -0.03
CHMP2B-203ENST00000471660 SAMD9Q5K651 1589 aa14.86□□□□□ -0.03
CHMP2B-203ENST00000471660 RTL5Q5HYW3 569 aaPredicted RBP14.86□□□□□ -0.03
CHMP2B-203ENST00000471660 NBR1Q14596 966 aa14.86□□□□□ -0.03
CHMP2B-203ENST00000471660 HNRNPUL2Q1KMD3 747 aaKnown RBP14.85□□□□□ -0.03
CHMP2B-203ENST00000471660 CASKIN1Q8WXD9 1431 aa14.85□□□□□ -0.03
CHMP2B-203ENST00000471660 CCER2I3L3R5 266 aa14.85□□□□□ -0.03
CHMP2B-203ENST00000471660 WASHC2AQ641Q2 1341 aa14.84□□□□□ -0.03
CHMP2B-203ENST00000471660 ABCA8O94911 1581 aa14.84□□□□□ -0.03
CHMP2B-203ENST00000471660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.83□□□□□ -0.04
CHMP2B-203ENST00000471660 RICTORQ6R327 1708 aa14.82□□□□□ -0.04
CHMP2B-203ENST00000471660 ZMYM4Q5VZL5 1548 aa14.81□□□□□ -0.04
CHMP2B-203ENST00000471660 AKNAQ7Z591 1439 aa14.8□□□□□ -0.04
CHMP2B-203ENST00000471660 WASHC2CQ9Y4E1 1318 aa14.8□□□□□ -0.04
CHMP2B-203ENST00000471660 PAK3O75914 559 aaPredicted RBP14.8□□□□□ -0.04
CHMP2B-203ENST00000471660 RTN4Q9NQC3 1192 aaKnown RBP14.8□□□□□ -0.04
CHMP2B-203ENST00000471660 ARHGEF12Q9NZN5 1544 aa14.79□□□□□ -0.04
CHMP2B-203ENST00000471660 LRRC9Q6ZRR7 1453 aa14.79□□□□□ -0.04
CHMP2B-203ENST00000471660 SIGLEC1Q9BZZ2 1709 aa14.78□□□□□ -0.04
CHMP2B-203ENST00000471660 UHRF1BP1Q6BDS2 1440 aa14.77□□□□□ -0.04
CHMP2B-203ENST00000471660 PPP4R2Q9NY27 417 aa14.76□□□□□ -0.05
CHMP2B-203ENST00000471660 CFAP74Q9C0B2 1584 aa14.76□□□□□ -0.05
CHMP2B-203ENST00000471660 USP35Q9P2H5 1018 aa14.75□□□□□ -0.05
CHMP2B-203ENST00000471660 ZFYVE16Q7Z3T8 1539 aa14.75□□□□□ -0.05
CHMP2B-203ENST00000471660 CCNB3Q8WWL7 1395 aa14.75□□□□□ -0.05
CHMP2B-203ENST00000471660 FHOD3Q2V2M9 1422 aa14.75□□□□□ -0.05
CHMP2B-203ENST00000471660 RAPGEF3O95398 923 aa14.74□□□□□ -0.05
CHMP2B-203ENST00000471660 RSPH6AQ9H0K4 717 aa14.73□□□□□ -0.05
CHMP2B-203ENST00000471660 SETD1BQ9UPS6 1966 aaKnown RBP14.73□□□□□ -0.05
CHMP2B-203ENST00000471660 CCDC18Q5T9S5 1454 aa14.73□□□□□ -0.05
CHMP2B-203ENST00000471660 GLIPR1L2Q4G1C9 344 aa14.72□□□□□ -0.05
CHMP2B-203ENST00000471660 IPO9Q96P70 1041 aaKnown RBP14.72□□□□□ -0.05
CHMP2B-203ENST00000471660 PODXL2Q9NZ53 605 aa14.72□□□□□ -0.05
CHMP2B-203ENST00000471660 MAGI2Q86UL8 1455 aa14.72□□□□□ -0.05
CHMP2B-203ENST00000471660 DENND4BO75064 1496 aaPredicted RBP14.72□□□□□ -0.05
CHMP2B-203ENST00000471660 UBAP1LF5GYI3 381 aa14.69□□□□□ -0.06
CHMP2B-203ENST00000471660 TRIM52Q96A61 297 aa14.69□□□□□ -0.06
CHMP2B-203ENST00000471660 NCOA1Q15788 1441 aa14.69□□□□□ -0.06
CHMP2B-203ENST00000471660 PPP1R15AO75807 674 aaPredicted RBP14.68□□□□□ -0.06
CHMP2B-203ENST00000471660 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
CHMP2B-203ENST00000471660 KANK4Q5T7N3 995 aaPredicted RBP14.67□□□□□ -0.06
CHMP2B-203ENST00000471660 PLEKHG5O94827 1062 aa14.67□□□□□ -0.06
CHMP2B-203ENST00000471660 HECW1Q76N89 1606 aa14.67□□□□□ -0.06
CHMP2B-203ENST00000471660 EHBP1L1Q8N3D4 1523 aa14.66□□□□□ -0.06
CHMP2B-203ENST00000471660 ANP32AP39687 249 aaKnown RBP14.66□□□□□ -0.06
CHMP2B-203ENST00000471660 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
CHMP2B-203ENST00000471660 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
CHMP2B-203ENST00000471660 SUPT6HQ7KZ85 1726 aaKnown RBP14.62□□□□□ -0.07
CHMP2B-203ENST00000471660 RANGAP1P46060 587 aaPredicted RBP14.62□□□□□ -0.07
CHMP2B-203ENST00000471660 C3P01024 1663 aa14.6□□□□□ -0.07
CHMP2B-203ENST00000471660 DDX10Q13206 875 aaKnown RBP14.6□□□□□ -0.07
CHMP2B-203ENST00000471660 ANP32CO43423 234 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms