RNA–Protein interactions for RNA: ENST00000471471.1

GTF2B-205, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-205ENST00000471471 ABCA9Q8IUA7 1624 aa11.6□□□□□ -0.55
GTF2B-205ENST00000471471 ARHGEF40Q8TER5 1519 aa11.6□□□□□ -0.55
GTF2B-205ENST00000471471 NEO1Q92859 1461 aa11.59□□□□□ -0.55
GTF2B-205ENST00000471471 YEATS2Q9ULM3 1422 aa11.59□□□□□ -0.55
GTF2B-205ENST00000471471 STRCQ7RTU9 1775 aa11.59□□□□□ -0.55
GTF2B-205ENST00000471471 SIGLEC1Q9BZZ2 1709 aa11.58□□□□□ -0.56
GTF2B-205ENST00000471471 SUPT5HO00267 1087 aaKnown RBP11.58□□□□□ -0.56
GTF2B-205ENST00000471471 ABCB7O75027 752 aa11.58□□□□□ -0.56
GTF2B-205ENST00000471471 ATP10BO94823 1461 aa11.55□□□□□ -0.56
GTF2B-205ENST00000471471 TTC37Q6PGP7 1564 aa11.54□□□□□ -0.56
GTF2B-205ENST00000471471 LTBP4Q8N2S1 1624 aa11.54□□□□□ -0.56
GTF2B-205ENST00000471471 RAPGEF2Q9Y4G8 1499 aa11.54□□□□□ -0.56
GTF2B-205ENST00000471471 FANCAO15360 1455 aa11.53□□□□□ -0.56
GTF2B-205ENST00000471471 PREX1Q8TCU6 1659 aa11.52□□□□□ -0.56
GTF2B-205ENST00000471471 POGZQ7Z3K3 1410 aa11.52□□□□□ -0.56
GTF2B-205ENST00000471471 RICTORQ6R327 1708 aa11.52□□□□□ -0.56
GTF2B-205ENST00000471471 ARID3CA6NKF2 412 aa11.52□□□□□ -0.57
GTF2B-205ENST00000471471 FHOD3Q2V2M9 1422 aa11.52□□□□□ -0.57
GTF2B-205ENST00000471471 PTPRTO14522 1441 aa11.51□□□□□ -0.57
GTF2B-205ENST00000471471 AKNAQ7Z591 1439 aa11.51□□□□□ -0.57
GTF2B-205ENST00000471471 DENND4BO75064 1496 aaPredicted RBP11.51□□□□□ -0.57
GTF2B-205ENST00000471471 GOLGA3Q08378 1498 aa11.51□□□□□ -0.57
GTF2B-205ENST00000471471 IQSEC2Q5JU85 1478 aa11.51□□□□□ -0.57
GTF2B-205ENST00000471471 FER1L4A9Z1Z3 1794 aa11.5□□□□□ -0.57
GTF2B-205ENST00000471471 MLECQ14165 292 aa11.49□□□□□ -0.57
GTF2B-205ENST00000471471 ZMYM4Q5VZL5 1548 aa11.49□□□□□ -0.57
GTF2B-205ENST00000471471 CEBPAP49715 358 aaPredicted RBP11.48□□□□□ -0.57
GTF2B-205ENST00000471471 ARHGEF12Q9NZN5 1544 aa11.48□□□□□ -0.57
GTF2B-205ENST00000471471 ZFYVE16Q7Z3T8 1539 aa11.46□□□□□ -0.57
GTF2B-205ENST00000471471 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
GTF2B-205ENST00000471471 CTTNBP2Q8WZ74 1663 aa11.45□□□□□ -0.58
GTF2B-205ENST00000471471 EFCAB5A4FU69 1503 aa11.45□□□□□ -0.58
GTF2B-205ENST00000471471 UHRF1BP1Q6BDS2 1440 aa11.44□□□□□ -0.58
GTF2B-205ENST00000471471 MAGI2Q86UL8 1455 aa11.44□□□□□ -0.58
GTF2B-205ENST00000471471 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
GTF2B-205ENST00000471471 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
GTF2B-205ENST00000471471 SETD1BQ9UPS6 1966 aaKnown RBP11.4□□□□□ -0.58
GTF2B-205ENST00000471471 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
GTF2B-205ENST00000471471 UBAP1LF5GYI3 381 aa11.39□□□□□ -0.59
GTF2B-205ENST00000471471 NCOA1Q15788 1441 aa11.39□□□□□ -0.59
GTF2B-205ENST00000471471 ATP10AO60312 1499 aa11.38□□□□□ -0.59
GTF2B-205ENST00000471471 CFAP74Q9C0B2 1584 aa11.38□□□□□ -0.59
GTF2B-205ENST00000471471 P3H3Q8IVL6 736 aa11.38□□□□□ -0.59
GTF2B-205ENST00000471471 C9orf84Q5VXU9 1444 aa11.37□□□□□ -0.59
GTF2B-205ENST00000471471 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.36□□□□□ -0.59
GTF2B-205ENST00000471471 RAPGEF6Q8TEU7 1601 aa11.36□□□□□ -0.59
GTF2B-205ENST00000471471 NUP153P49790 1475 aaKnown RBP11.36□□□□□ -0.59
GTF2B-205ENST00000471471 ZNF335Q9H4Z2 1342 aaPredicted RBP11.35□□□□□ -0.59
GTF2B-205ENST00000471471 HSPA1LP34931 641 aa11.34□□□□□ -0.59
GTF2B-205ENST00000471471 SCAPERQ9BY12 1400 aa11.34□□□□□ -0.59
GTF2B-205ENST00000471471 C3P01024 1663 aa11.33□□□□□ -0.6
GTF2B-205ENST00000471471 PRXQ9BXM0 1461 aa11.32□□□□□ -0.6
GTF2B-205ENST00000471471 FAM9AQ8IZU1 332 aaPredicted RBP11.31□□□□□ -0.6
GTF2B-205ENST00000471471 TRAPPC8Q9Y2L5 1435 aa11.31□□□□□ -0.6
GTF2B-205ENST00000471471 SAMD9Q5K651 1589 aa11.31□□□□□ -0.6
GTF2B-205ENST00000471471 PLEKHD1A6NEE1 506 aa11.3□□□□□ -0.6
GTF2B-205ENST00000471471 POLA2Q14181 598 aa11.3□□□□□ -0.6
GTF2B-205ENST00000471471 CAMSAP1Q5T5Y3 1602 aa11.3□□□□□ -0.6
GTF2B-205ENST00000471471 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
GTF2B-205ENST00000471471 PLCH2O75038 1416 aa11.27□□□□□ -0.6
GTF2B-205ENST00000471471 REREQ9P2R6 1566 aa11.25□□□□□ -0.61
GTF2B-205ENST00000471471 DIP2CQ9Y2E4 1556 aa11.25□□□□□ -0.61
GTF2B-205ENST00000471471 PIP4K2BP78356 416 aa11.25□□□□□ -0.61
GTF2B-205ENST00000471471 CHRDL2Q6WN34 429 aa11.25□□□□□ -0.61
GTF2B-205ENST00000471471 KDM5CP41229 1560 aa11.24□□□□□ -0.61
GTF2B-205ENST00000471471 AFAP1Q8N556 730 aa11.23□□□□□ -0.61
GTF2B-205ENST00000471471 RGS17Q9UGC6 210 aaPredicted RBP11.23□□□□□ -0.61
GTF2B-205ENST00000471471 TCOF1Q13428 1488 aaKnown RBP11.23□□□□□ -0.61
GTF2B-205ENST00000471471 ZNF518AQ6AHZ1 1483 aa11.23□□□□□ -0.61
GTF2B-205ENST00000471471 AGLP35573 1532 aa11.23□□□□□ -0.61
GTF2B-205ENST00000471471 PLA2R1Q13018 1463 aa11.22□□□□□ -0.61
GTF2B-205ENST00000471471 NPATQ14207 1427 aa11.22□□□□□ -0.61
GTF2B-205ENST00000471471 ALKQ9UM73 1620 aa11.21□□□□□ -0.61
GTF2B-205ENST00000471471 PKD2Q13563 968 aa11.21□□□□□ -0.61
GTF2B-205ENST00000471471 ABCA6Q8N139 1617 aa11.2□□□□□ -0.62
GTF2B-205ENST00000471471 CNTLNQ9NXG0 1405 aa11.2□□□□□ -0.62
GTF2B-205ENST00000471471 TOM1O60784 492 aa11.2□□□□□ -0.62
GTF2B-205ENST00000471471 EFCAB2Q5VUJ9 269 aa11.19□□□□□ -0.62
GTF2B-205ENST00000471471 ESF1Q9H501 851 aaKnown RBP11.18□□□□□ -0.62
GTF2B-205ENST00000471471 CDK13Q14004 1512 aaKnown RBP11.18□□□□□ -0.62
GTF2B-205ENST00000471471 MLH3Q9UHC1 1453 aa11.18□□□□□ -0.62
GTF2B-205ENST00000471471 ZNF142P52746 1687 aaPredicted RBP11.17□□□□□ -0.62
GTF2B-205ENST00000471471 SRCAPQ6ZRS2 3230 aa11.16□□□□□ -0.62
GTF2B-205ENST00000471471 ZMYM3Q14202 1370 aa11.16□□□□□ -0.62
GTF2B-205ENST00000471471 CPS1P31327 1500 aa11.16□□□□□ -0.62
GTF2B-205ENST00000471471 MYO3AQ8NEV4 1616 aa11.16□□□□□ -0.62
GTF2B-205ENST00000471471 MYO5CQ9NQX4 1742 aa11.15□□□□□ -0.62
GTF2B-205ENST00000471471 MROH2AA6NES4 1674 aa11.15□□□□□ -0.62
GTF2B-205ENST00000471471 CEP170BQ9Y4F5 1589 aaPredicted RBP11.15□□□□□ -0.62
GTF2B-205ENST00000471471 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
GTF2B-205ENST00000471471 SHANK2Q9UPX8 1470 aa11.13□□□□□ -0.63
GTF2B-205ENST00000471471 AKT1S1Q96B36 256 aa11.13□□□□□ -0.63
GTF2B-205ENST00000471471 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
GTF2B-205ENST00000471471 MYT1LQ9UL68 1186 aa11.13□□□□□ -0.63
GTF2B-205ENST00000471471 PTPRKQ15262 1439 aa11.12□□□□□ -0.63
GTF2B-205ENST00000471471 KIF14Q15058 1648 aa11.12□□□□□ -0.63
GTF2B-205ENST00000471471 ARHGAP5Q13017 1502 aa11.11□□□□□ -0.63
GTF2B-205ENST00000471471 POTEAQ6S8J7 498 aa11.11□□□□□ -0.63
GTF2B-205ENST00000471471 SUPT6HQ7KZ85 1726 aaKnown RBP11.11□□□□□ -0.63
GTF2B-205ENST00000471471 NEURL4Q96JN8 1562 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms