RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 SMARCA2P51531 1590 aa18.32■□□□□ 0.52
HDAC7-219ENST00000470668 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
HDAC7-219ENST00000470668 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
HDAC7-219ENST00000470668 MSNP26038 577 aaKnown RBP18.3■□□□□ 0.52
HDAC7-219ENST00000470668 FHAD1B1AJZ9 1412 aa18.3■□□□□ 0.52
HDAC7-219ENST00000470668 PLCB2Q00722 1185 aa18.3■□□□□ 0.52
HDAC7-219ENST00000470668 FTSJ3Q8IY81 847 aaKnown RBP18.29■□□□□ 0.52
HDAC7-219ENST00000470668 PRKRIP1Q9H875 184 aaPredicted RBP18.29■□□□□ 0.52
HDAC7-219ENST00000470668 PLIN1O60240 522 aa18.29■□□□□ 0.52
HDAC7-219ENST00000470668 FHOD3Q2V2M9 1422 aa18.29■□□□□ 0.52
HDAC7-219ENST00000470668 GOLGA6L3A6NEY3 463 aa18.28■□□□□ 0.52
HDAC7-219ENST00000470668 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.52
HDAC7-219ENST00000470668 L3MBTL2Q969R5 705 aa18.26■□□□□ 0.51
HDAC7-219ENST00000470668 HSCBQ8IWL3 235 aa18.25■□□□□ 0.51
HDAC7-219ENST00000470668 ZBED9Q6R2W3 1325 aa18.25■□□□□ 0.51
HDAC7-219ENST00000470668 MYH16Q9H6N6 1097 aa18.24■□□□□ 0.51
HDAC7-219ENST00000470668 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
HDAC7-219ENST00000470668 NFKBIBQ15653 356 aa18.21■□□□□ 0.51
HDAC7-219ENST00000470668 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
HDAC7-219ENST00000470668 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
HDAC7-219ENST00000470668 CDK11BP21127 795 aaKnown RBP18.18■□□□□ 0.5
HDAC7-219ENST00000470668 RRP1P56182 461 aaKnown RBP18.16■□□□□ 0.5
HDAC7-219ENST00000470668 MPHOSPH9Q99550 1183 aa18.15■□□□□ 0.5
HDAC7-219ENST00000470668 NPM1P06748 294 aaKnown RBP eCLIP18.15■□□□□ 0.5
HDAC7-219ENST00000470668 CRBNQ96SW2 442 aa18.13■□□□□ 0.49
HDAC7-219ENST00000470668 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
HDAC7-219ENST00000470668 MFAP1P55081 439 aaKnown RBP18.12■□□□□ 0.49
HDAC7-219ENST00000470668 FAM161AQ3B820 660 aa18.12■□□□□ 0.49
HDAC7-219ENST00000470668 PKNOX2Q96KN3 472 aa18.11■□□□□ 0.49
HDAC7-219ENST00000470668 FOXD4L1Q9NU39 408 aa18.11■□□□□ 0.49
HDAC7-219ENST00000470668 PKD2Q13563 968 aa18.1■□□□□ 0.49
HDAC7-219ENST00000470668 ERCC6Q03468 1493 aa18.09■□□□□ 0.49
HDAC7-219ENST00000470668 KTN1Q86UP2 1357 aaKnown RBP18.09■□□□□ 0.49
HDAC7-219ENST00000470668 CLUAP1Q96AJ1 413 aa18.09■□□□□ 0.49
HDAC7-219ENST00000470668 GBP4Q96PP9 640 aa18.09■□□□□ 0.49
HDAC7-219ENST00000470668 MS4A1P11836 297 aa18.08■□□□□ 0.48
HDAC7-219ENST00000470668 RALBP1Q15311 655 aa18.08■□□□□ 0.48
HDAC7-219ENST00000470668 FRAT2O75474 233 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-219ENST00000470668 IGF1RP08069 1367 aa18.07■□□□□ 0.48
HDAC7-219ENST00000470668 NLRP13Q86W25 1043 aa18.06■□□□□ 0.48
HDAC7-219ENST00000470668 CFAP53Q96M91 514 aa18.06■□□□□ 0.48
HDAC7-219ENST00000470668 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
HDAC7-219ENST00000470668 CDCA8Q53HL2 280 aa18.05■□□□□ 0.48
HDAC7-219ENST00000470668 PDE3BQ13370 1112 aa18.05■□□□□ 0.48
HDAC7-219ENST00000470668 TMF1P82094 1093 aa18.04■□□□□ 0.48
HDAC7-219ENST00000470668 GOLGA2Q08379 1002 aa18.03■□□□□ 0.48
HDAC7-219ENST00000470668 SYNJ1O43426 1573 aa18.02■□□□□ 0.48
HDAC7-219ENST00000470668 FMN1Q68DA7 1419 aa18.02■□□□□ 0.48
HDAC7-219ENST00000470668 CENPQQ7L2Z9 268 aaPredicted RBP18.02■□□□□ 0.48
HDAC7-219ENST00000470668 CCDC146Q8IYE0 955 aa18.02■□□□□ 0.48
HDAC7-219ENST00000470668 RAD54L2Q9Y4B4 1467 aa18.02■□□□□ 0.48
HDAC7-219ENST00000470668 KIF21BO75037 1637 aa18.01■□□□□ 0.47
HDAC7-219ENST00000470668 WASHC2AQ641Q2 1341 aa18.01■□□□□ 0.47
HDAC7-219ENST00000470668 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
HDAC7-219ENST00000470668 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
HDAC7-219ENST00000470668 FAM13BQ9NYF5 915 aa18■□□□□ 0.47
HDAC7-219ENST00000470668 CHAF1AQ13111 956 aaPredicted RBP17.99■□□□□ 0.47
HDAC7-219ENST00000470668 CASC1Q6TDU7 716 aa17.99■□□□□ 0.47
HDAC7-219ENST00000470668 AKNAQ7Z591 1439 aa17.99■□□□□ 0.47
HDAC7-219ENST00000470668 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
HDAC7-219ENST00000470668 RWDD1Q9H446 243 aaPredicted RBP17.98■□□□□ 0.47
HDAC7-219ENST00000470668 ESF1Q9H501 851 aaKnown RBP17.98■□□□□ 0.47
HDAC7-219ENST00000470668 PHLDB1Q86UU1 1377 aa17.97■□□□□ 0.47
HDAC7-219ENST00000470668 MAPK8IP3Q9UPT6 1336 aa17.97■□□□□ 0.47
HDAC7-219ENST00000470668 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
HDAC7-219ENST00000470668 PDS5BQ9NTI5 1447 aa17.97■□□□□ 0.47
HDAC7-219ENST00000470668 FGD5Q6ZNL6 1462 aa17.97■□□□□ 0.47
HDAC7-219ENST00000470668 ST20-MTHFSA0A0A6YYL1 179 aa17.97■□□□□ 0.47
HDAC7-219ENST00000470668 APBB1O00213 710 aa17.96■□□□□ 0.47
HDAC7-219ENST00000470668 HNRNPMP52272 730 aaKnown RBP eCLIP17.95■□□□□ 0.462e-6■■■□□ 16.7
HDAC7-219ENST00000470668 CALD1Q05682 793 aaKnown RBP17.95■□□□□ 0.46
HDAC7-219ENST00000470668 A0A0U1RQG5 324 aaPredicted RBP17.94■□□□□ 0.46
HDAC7-219ENST00000470668 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
HDAC7-219ENST00000470668 KIAA2012Q0VF49 1180 aa17.94■□□□□ 0.46
HDAC7-219ENST00000470668 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
HDAC7-219ENST00000470668 MYBBP1AQ9BQG0 1328 aaKnown RBP17.94■□□□□ 0.46
HDAC7-219ENST00000470668 BACH2Q9BYV9 841 aa17.94■□□□□ 0.46
HDAC7-219ENST00000470668 NUP155O75694 1391 aa17.93■□□□□ 0.46
HDAC7-219ENST00000470668 ITPRIPQ8IWB1 547 aa17.92■□□□□ 0.46
HDAC7-219ENST00000470668 COG6Q9Y2V7 657 aa17.92■□□□□ 0.46
HDAC7-219ENST00000470668 ZNF644Q9H582 1327 aaPredicted RBP17.91■□□□□ 0.46
HDAC7-219ENST00000470668 CDCA7LQ96GN5 454 aa17.91■□□□□ 0.46
HDAC7-219ENST00000470668 DDX49Q9Y6V7 483 aaKnown RBP17.91■□□□□ 0.46
HDAC7-219ENST00000470668 KIF7Q2M1P5 1343 aa17.91■□□□□ 0.46
HDAC7-219ENST00000470668 PMFBP1Q8TBY8 1022 aa17.91■□□□□ 0.46
HDAC7-219ENST00000470668 FAM43AQ8N2R8 423 aa17.91■□□□□ 0.46
HDAC7-219ENST00000470668 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
HDAC7-219ENST00000470668 CCDC7Q96M83 1385 aa17.89■□□□□ 0.45
HDAC7-219ENST00000470668 DDX11L8A8MPP1 907 aa17.89■□□□□ 0.45
HDAC7-219ENST00000470668 FOXD4L5Q5VV16 416 aaPredicted RBP17.89■□□□□ 0.45
HDAC7-219ENST00000470668 SKAP1Q86WV1 359 aa17.89■□□□□ 0.45
HDAC7-219ENST00000470668 FOXD4L4Q8WXT5 416 aaPredicted RBP17.89■□□□□ 0.45
HDAC7-219ENST00000470668 CENPJQ9HC77 1338 aaPredicted RBP17.88■□□□□ 0.45
HDAC7-219ENST00000470668 DRC7Q8IY82 874 aa17.87■□□□□ 0.45
HDAC7-219ENST00000470668 KIF15Q9NS87 1388 aa17.87■□□□□ 0.45
HDAC7-219ENST00000470668 SAFB2Q14151 953 aaKnown RBP eCLIP17.87■□□□□ 0.45
HDAC7-219ENST00000470668 MORC1Q86VD1 984 aa17.86■□□□□ 0.45
HDAC7-219ENST00000470668 ZRSR1Q15695 479 aaKnown RBP17.86■□□□□ 0.45
HDAC7-219ENST00000470668 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
HDAC7-219ENST00000470668 RRP7AQ9Y3A4 280 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms