RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 ARHGEF12Q9NZN5 1544 aa20.59■□□□□ 0.89
LSM2-209ENST00000470083 FER1L4A9Z1Z3 1794 aa20.59■□□□□ 0.89
LSM2-209ENST00000470083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.58■□□□□ 0.893e-6■□□□□ 9.2
LSM2-209ENST00000470083 HECW1Q76N89 1606 aa20.56■□□□□ 0.88
LSM2-209ENST00000470083 PREX1Q8TCU6 1659 aa20.56■□□□□ 0.88
LSM2-209ENST00000470083 CEBPAP49715 358 aaPredicted RBP20.54■□□□□ 0.88
LSM2-209ENST00000470083 ATP10AO60312 1499 aa20.54■□□□□ 0.88
LSM2-209ENST00000470083 C9orf84Q5VXU9 1444 aa20.53■□□□□ 0.88
LSM2-209ENST00000470083 UHRF1BP1Q6BDS2 1440 aa20.53■□□□□ 0.88
LSM2-209ENST00000470083 SCAPERQ9BY12 1400 aa20.53■□□□□ 0.88
LSM2-209ENST00000470083 STRCQ7RTU9 1775 aa20.51■□□□□ 0.87
LSM2-209ENST00000470083 PTPRTO14522 1441 aa20.51■□□□□ 0.87
LSM2-209ENST00000470083 PLCH2O75038 1416 aa20.48■□□□□ 0.87
LSM2-209ENST00000470083 IQSEC2Q5JU85 1478 aa20.46■□□□□ 0.87
LSM2-209ENST00000470083 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
LSM2-209ENST00000470083 LTBP4Q8N2S1 1624 aa20.43■□□□□ 0.86
LSM2-209ENST00000470083 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
LSM2-209ENST00000470083 EFCAB2Q5VUJ9 269 aa20.4■□□□□ 0.86
LSM2-209ENST00000470083 SETD1BQ9UPS6 1966 aaKnown RBP20.39■□□□□ 0.86
LSM2-209ENST00000470083 ZNF518AQ6AHZ1 1483 aa20.39■□□□□ 0.85
LSM2-209ENST00000470083 CDK13Q14004 1512 aaKnown RBP20.37■□□□□ 0.85
LSM2-209ENST00000470083 NCOA1Q15788 1441 aa20.36■□□□□ 0.85
LSM2-209ENST00000470083 TRAPPC8Q9Y2L5 1435 aa20.35■□□□□ 0.85
LSM2-209ENST00000470083 KDM5CP41229 1560 aa20.34■□□□□ 0.85
LSM2-209ENST00000470083 AFAP1Q8N556 730 aa20.34■□□□□ 0.85
LSM2-209ENST00000470083 REREQ9P2R6 1566 aa20.33■□□□□ 0.84
LSM2-209ENST00000470083 DIP2CQ9Y2E4 1556 aa20.3■□□□□ 0.84
LSM2-209ENST00000470083 ESF1Q9H501 851 aaKnown RBP20.3■□□□□ 0.84
LSM2-209ENST00000470083 MYT1LQ9UL68 1186 aa20.29■□□□□ 0.84
LSM2-209ENST00000470083 C3P01024 1663 aa20.29■□□□□ 0.84
LSM2-209ENST00000470083 AGLP35573 1532 aa20.27■□□□□ 0.84
LSM2-209ENST00000470083 UBAP1LF5GYI3 381 aa20.27■□□□□ 0.84
LSM2-209ENST00000470083 MYO5CQ9NQX4 1742 aa20.27■□□□□ 0.83
LSM2-209ENST00000470083 CNTLNQ9NXG0 1405 aa20.27■□□□□ 0.83
LSM2-209ENST00000470083 MLH3Q9UHC1 1453 aa20.26■□□□□ 0.83
LSM2-209ENST00000470083 CDK11AQ9UQ88 783 aaPredicted RBP20.26■□□□□ 0.83
LSM2-209ENST00000470083 ARHGAP5Q13017 1502 aa20.25■□□□□ 0.83
LSM2-209ENST00000470083 EEA1Q15075 1411 aa20.24■□□□□ 0.83
LSM2-209ENST00000470083 ZNF335Q9H4Z2 1342 aaPredicted RBP20.24■□□□□ 0.83
LSM2-209ENST00000470083 ABCA6Q8N139 1617 aa20.23■□□□□ 0.83
LSM2-209ENST00000470083 NPATQ14207 1427 aa20.22■□□□□ 0.83
LSM2-209ENST00000470083 CAMSAP1Q5T5Y3 1602 aa20.22■□□□□ 0.83
LSM2-209ENST00000470083 KIF14Q15058 1648 aa20.2■□□□□ 0.82
LSM2-209ENST00000470083 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
LSM2-209ENST00000470083 ATP1B4Q9UN42 357 aaPredicted RBP20.19■□□□□ 0.82
LSM2-209ENST00000470083 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
LSM2-209ENST00000470083 NCKAP5LQ9HCH0 1330 aa20.18■□□□□ 0.82
LSM2-209ENST00000470083 CLIP1P30622 1438 aa20.17■□□□□ 0.82
LSM2-209ENST00000470083 PKD2Q13563 968 aa20.16■□□□□ 0.82
LSM2-209ENST00000470083 PLA2R1Q13018 1463 aa20.15■□□□□ 0.82
LSM2-209ENST00000470083 ABCC1P33527 1531 aa20.13■□□□□ 0.81
LSM2-209ENST00000470083 ZMYM3Q14202 1370 aa20.13■□□□□ 0.81
LSM2-209ENST00000470083 TCOF1Q13428 1488 aaKnown RBP20.11■□□□□ 0.81
LSM2-209ENST00000470083 MED1Q15648 1581 aaPredicted RBP20.11■□□□□ 0.81
LSM2-209ENST00000470083 HSPA1LP34931 641 aa20.1■□□□□ 0.81
LSM2-209ENST00000470083 MROH2AA6NES4 1674 aa20.1■□□□□ 0.81
LSM2-209ENST00000470083 PPP6R1Q9UPN7 881 aa20.07■□□□□ 0.8
LSM2-209ENST00000470083 KIDINS220Q9ULH0 1771 aa20.07■□□□□ 0.8
LSM2-209ENST00000470083 CDC42BPBQ9Y5S2 1711 aa20.06■□□□□ 0.8
LSM2-209ENST00000470083 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
LSM2-209ENST00000470083 ZNF142P52746 1687 aaPredicted RBP20.05■□□□□ 0.8
LSM2-209ENST00000470083 PREX2Q70Z35 1606 aa20.05■□□□□ 0.8
LSM2-209ENST00000470083 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
LSM2-209ENST00000470083 CEP170BQ9Y4F5 1589 aaPredicted RBP20.04■□□□□ 0.8
LSM2-209ENST00000470083 ITSN2Q9NZM3 1697 aa20.04■□□□□ 0.8
LSM2-209ENST00000470083 PTPRKQ15262 1439 aa20.03■□□□□ 0.8
LSM2-209ENST00000470083 MYO3AQ8NEV4 1616 aa20.03■□□□□ 0.8
LSM2-209ENST00000470083 TOM1O60784 492 aa20.03■□□□□ 0.8
LSM2-209ENST00000470083 PIP4K2BP78356 416 aa20.03■□□□□ 0.8
LSM2-209ENST00000470083 SAMD9LQ8IVG5 1584 aa20■□□□□ 0.79
LSM2-209ENST00000470083 SPAG9O60271 1321 aaKnown RBP20■□□□□ 0.79
LSM2-209ENST00000470083 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
LSM2-209ENST00000470083 CPS1P31327 1500 aa19.98■□□□□ 0.79
LSM2-209ENST00000470083 UBTFP17480 764 aaKnown RBP19.98■□□□□ 0.79
LSM2-209ENST00000470083 PLXNC1O60486 1568 aa19.95■□□□□ 0.78
LSM2-209ENST00000470083 A2ML1A8K2U0 1454 aa19.95■□□□□ 0.78
LSM2-209ENST00000470083 CLTCQ00610 1675 aaKnown RBP19.94■□□□□ 0.78
LSM2-209ENST00000470083 A2MP01023 1474 aa19.93■□□□□ 0.78
LSM2-209ENST00000470083 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
LSM2-209ENST00000470083 SHANK2Q9UPX8 1470 aa19.93■□□□□ 0.78
LSM2-209ENST00000470083 SYCP2Q9BX26 1530 aa19.93■□□□□ 0.78
LSM2-209ENST00000470083 ZNF777Q9ULD5 760 aaPredicted RBP19.93■□□□□ 0.78
LSM2-209ENST00000470083 GGT6Q6P531 493 aa19.92■□□□□ 0.78
LSM2-209ENST00000470083 LRRIQ1Q96JM4 1722 aa19.92■□□□□ 0.78
LSM2-209ENST00000470083 ATP7AQ04656 1500 aa19.92■□□□□ 0.78
LSM2-209ENST00000470083 SUPT6HQ7KZ85 1726 aaKnown RBP19.91■□□□□ 0.78
LSM2-209ENST00000470083 HNRNPMP52272 730 aaKnown RBP eCLIP19.9■□□□□ 0.78
LSM2-209ENST00000470083 KIAA1107Q9UPP5 1409 aa19.9■□□□□ 0.78
LSM2-209ENST00000470083 DNMT1P26358 1616 aaKnown RBP19.9■□□□□ 0.78
LSM2-209ENST00000470083 CDC42BPAQ5VT25 1732 aa19.89■□□□□ 0.77
LSM2-209ENST00000470083 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.77
LSM2-209ENST00000470083 EHMT2Q96KQ7 1210 aa19.89■□□□□ 0.77
LSM2-209ENST00000470083 NEURL4Q96JN8 1562 aa19.88■□□□□ 0.77
LSM2-209ENST00000470083 INO80Q9ULG1 1556 aaPredicted RBP19.87■□□□□ 0.77
LSM2-209ENST00000470083 GPATCH8Q9UKJ3 1502 aaKnown RBP19.86■□□□□ 0.77
LSM2-209ENST00000470083 PLEKHH2Q8IVE3 1493 aa19.86■□□□□ 0.77
LSM2-209ENST00000470083 ALKQ9UM73 1620 aa19.85■□□□□ 0.77
LSM2-209ENST00000470083 TNRQ92752 1358 aa19.83■□□□□ 0.77
LSM2-209ENST00000470083 VWDEQ8N2E2 1590 aa19.83■□□□□ 0.76
LSM2-209ENST00000470083 ANKLE2Q86XL3 938 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms