RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ATP1B4Q9UN42 357 aaPredicted RBP31.81■■■□□ 2.68
NCKIPSD-209ENST00000470006 CDK13Q14004 1512 aaKnown RBP31.78■■■□□ 2.68
NCKIPSD-209ENST00000470006 EEA1Q15075 1411 aa31.77■■■□□ 2.68
NCKIPSD-209ENST00000470006 PLCH2O75038 1416 aa31.76■■■□□ 2.68
NCKIPSD-209ENST00000470006 CEBPAP49715 358 aaPredicted RBP31.75■■■□□ 2.67
NCKIPSD-209ENST00000470006 ATP10AO60312 1499 aa31.75■■■□□ 2.67
NCKIPSD-209ENST00000470006 MYT1LQ9UL68 1186 aa31.73■■■□□ 2.67
NCKIPSD-209ENST00000470006 PREX1Q8TCU6 1659 aa31.73■■■□□ 2.67
NCKIPSD-209ENST00000470006 EFCAB2Q5VUJ9 269 aa31.72■■■□□ 2.67
NCKIPSD-209ENST00000470006 C9orf84Q5VXU9 1444 aa31.72■■■□□ 2.67
NCKIPSD-209ENST00000470006 ARHGEF12Q9NZN5 1544 aa31.7■■■□□ 2.67
NCKIPSD-209ENST00000470006 DISP3Q9P2K9 1392 aa31.7■■■□□ 2.67
NCKIPSD-209ENST00000470006 DMRT2Q9Y5R5 561 aa31.7■■■□□ 2.67
NCKIPSD-209ENST00000470006 MYO5CQ9NQX4 1742 aa31.66■■■□□ 2.66
NCKIPSD-209ENST00000470006 EHMT2Q96KQ7 1210 aa31.64■■■□□ 2.66
NCKIPSD-209ENST00000470006 CDK11AQ9UQ88 783 aaPredicted RBP31.64■■■□□ 2.66
NCKIPSD-209ENST00000470006 UHRF1BP1Q6BDS2 1440 aa31.6■■■□□ 2.65
NCKIPSD-209ENST00000470006 AFAP1Q8N556 730 aa31.59■■■□□ 2.65
NCKIPSD-209ENST00000470006 ILDR2Q71H61 639 aa31.58■■■□□ 2.65
NCKIPSD-209ENST00000470006 STRCQ7RTU9 1775 aa31.58■■■□□ 2.65
NCKIPSD-209ENST00000470006 ZNF518AQ6AHZ1 1483 aa31.58■■■□□ 2.65
NCKIPSD-209ENST00000470006 SETD1BQ9UPS6 1966 aaKnown RBP31.56■■■□□ 2.64
NCKIPSD-209ENST00000470006 UBTFP17480 764 aaKnown RBP31.56■■■□□ 2.64
NCKIPSD-209ENST00000470006 ARHGAP5Q13017 1502 aa31.55■■■□□ 2.64
NCKIPSD-209ENST00000470006 ESF1Q9H501 851 aaKnown RBP31.55■■■□□ 2.64
NCKIPSD-209ENST00000470006 FMN1Q68DA7 1419 aa31.54■■■□□ 2.64
NCKIPSD-209ENST00000470006 KIF14Q15058 1648 aa31.53■■■□□ 2.64
NCKIPSD-209ENST00000470006 SOCS7O14512 581 aa31.51■■■□□ 2.63
NCKIPSD-209ENST00000470006 CLIP1P30622 1438 aa31.47■■■□□ 2.63
NCKIPSD-209ENST00000470006 KDM5CP41229 1560 aa31.46■■■□□ 2.63
NCKIPSD-209ENST00000470006 TROQ12816 1431 aaPredicted RBP31.45■■■□□ 2.63
NCKIPSD-209ENST00000470006 DIP2CQ9Y2E4 1556 aa31.44■■■□□ 2.62
NCKIPSD-209ENST00000470006 C3P01024 1663 aa31.43■■■□□ 2.62
NCKIPSD-209ENST00000470006 PTPRTO14522 1441 aa31.41■■■□□ 2.62
NCKIPSD-209ENST00000470006 ARHGAP35Q9NRY4 1499 aa31.39■■■□□ 2.62
NCKIPSD-209ENST00000470006 ABCA6Q8N139 1617 aa31.38■■■□□ 2.61
NCKIPSD-209ENST00000470006 SPATA31D1Q6ZQQ2 1576 aa31.38■■■□□ 2.61
NCKIPSD-209ENST00000470006 REREQ9P2R6 1566 aa31.36■■■□□ 2.61
NCKIPSD-209ENST00000470006 CDC42BPBQ9Y5S2 1711 aa31.35■■■□□ 2.61
NCKIPSD-209ENST00000470006 MLH3Q9UHC1 1453 aa31.35■■■□□ 2.61
NCKIPSD-209ENST00000470006 TRAPPC8Q9Y2L5 1435 aa31.35■■■□□ 2.61
NCKIPSD-209ENST00000470006 LRRIQ1Q96JM4 1722 aa31.29■■■□□ 2.6
NCKIPSD-209ENST00000470006 AGLP35573 1532 aa31.29■■■□□ 2.6
NCKIPSD-209ENST00000470006 LTBP4Q8N2S1 1624 aa31.27■■■□□ 2.6
NCKIPSD-209ENST00000470006 CNTLNQ9NXG0 1405 aa31.26■■■□□ 2.6
NCKIPSD-209ENST00000470006 ABCC1P33527 1531 aa31.26■■■□□ 2.59
NCKIPSD-209ENST00000470006 PREX2Q70Z35 1606 aa31.26■■■□□ 2.59
NCKIPSD-209ENST00000470006 ITSN2Q9NZM3 1697 aa31.25■■■□□ 2.59
NCKIPSD-209ENST00000470006 NCOA1Q15788 1441 aa31.25■■■□□ 2.59
NCKIPSD-209ENST00000470006 ZNF777Q9ULD5 760 aaPredicted RBP31.22■■■□□ 2.59
NCKIPSD-209ENST00000470006 IQSEC2Q5JU85 1478 aa31.21■■■□□ 2.59
NCKIPSD-209ENST00000470006 KIDINS220Q9ULH0 1771 aa31.21■■■□□ 2.59
NCKIPSD-209ENST00000470006 CAMSAP1Q5T5Y3 1602 aa31.2■■■□□ 2.58
NCKIPSD-209ENST00000470006 NCKAP5LQ9HCH0 1330 aa31.17■■■□□ 2.58
NCKIPSD-209ENST00000470006 CCDC18Q5T9S5 1454 aa31.15■■■□□ 2.58
NCKIPSD-209ENST00000470006 UBAP1LF5GYI3 381 aa31.15■■■□□ 2.58
NCKIPSD-209ENST00000470006 ZMYM3Q14202 1370 aa31.15■■■□□ 2.58
NCKIPSD-209ENST00000470006 NPATQ14207 1427 aa31.14■■■□□ 2.58
NCKIPSD-209ENST00000470006 CDC42BPAQ5VT25 1732 aa31.13■■■□□ 2.57
NCKIPSD-209ENST00000470006 SPAG9O60271 1321 aaKnown RBP31.12■■■□□ 2.57
NCKIPSD-209ENST00000470006 SUPT6HQ7KZ85 1726 aaKnown RBP31.12■■■□□ 2.57
NCKIPSD-209ENST00000470006 MROH2AA6NES4 1674 aa31.11■■■□□ 2.57
NCKIPSD-209ENST00000470006 ZNF335Q9H4Z2 1342 aaPredicted RBP31.11■■■□□ 2.57
NCKIPSD-209ENST00000470006 CASKIN1Q8WXD9 1431 aa31.1■■■□□ 2.57
NCKIPSD-209ENST00000470006 SAMD9LQ8IVG5 1584 aa31.09■■■□□ 2.57
NCKIPSD-209ENST00000470006 HNRNPMP52272 730 aaKnown RBP eCLIP31.08■■■□□ 2.579e-7■■■□□ 18.8
NCKIPSD-209ENST00000470006 CLTCQ00610 1675 aaKnown RBP31.05■■■□□ 2.56
NCKIPSD-209ENST00000470006 SYCP2Q9BX26 1530 aa31.04■■■□□ 2.56
NCKIPSD-209ENST00000470006 PKD2Q13563 968 aa31.04■■■□□ 2.56
NCKIPSD-209ENST00000470006 GGT6Q6P531 493 aa31.03■■■□□ 2.56
NCKIPSD-209ENST00000470006 MYO3AQ8NEV4 1616 aa30.99■■■□□ 2.55
NCKIPSD-209ENST00000470006 ATP7AQ04656 1500 aa30.98■■■□□ 2.55
NCKIPSD-209ENST00000470006 SCAF1Q9H7N4 1312 aaKnown RBP30.97■■■□□ 2.55
NCKIPSD-209ENST00000470006 CFDP1Q9UEE9 299 aaPredicted RBP30.96■■■□□ 2.55
NCKIPSD-209ENST00000470006 GPATCH8Q9UKJ3 1502 aaKnown RBP30.96■■■□□ 2.55
NCKIPSD-209ENST00000470006 CEP170BQ9Y4F5 1589 aaPredicted RBP30.96■■■□□ 2.55
NCKIPSD-209ENST00000470006 A2MP01023 1474 aa30.95■■■□□ 2.55
NCKIPSD-209ENST00000470006 PLA2R1Q13018 1463 aa30.95■■■□□ 2.55
NCKIPSD-209ENST00000470006 ZNF142P52746 1687 aaPredicted RBP30.95■■■□□ 2.55
NCKIPSD-209ENST00000470006 PPP6R1Q9UPN7 881 aa30.95■■■□□ 2.55
NCKIPSD-209ENST00000470006 PTPRKQ15262 1439 aa30.93■■■□□ 2.54
NCKIPSD-209ENST00000470006 FYCO1Q9BQS8 1478 aa30.93■■■□□ 2.54
NCKIPSD-209ENST00000470006 PLEKHH2Q8IVE3 1493 aa30.9■■■□□ 2.54
NCKIPSD-209ENST00000470006 TCOF1Q13428 1488 aaKnown RBP30.89■■■□□ 2.54
NCKIPSD-209ENST00000470006 CHIC1Q5VXU3 224 aa30.89■■■□□ 2.54
NCKIPSD-209ENST00000470006 CCNB3Q8WWL7 1395 aa30.89■■■□□ 2.54
NCKIPSD-209ENST00000470006 KIAA1107Q9UPP5 1409 aa30.89■■■□□ 2.53
NCKIPSD-209ENST00000470006 PLXNC1O60486 1568 aa30.88■■■□□ 2.53
NCKIPSD-209ENST00000470006 PIP4K2BP78356 416 aa30.88■■■□□ 2.53
NCKIPSD-209ENST00000470006 INO80Q9ULG1 1556 aaPredicted RBP30.88■■■□□ 2.53
NCKIPSD-209ENST00000470006 HSPA1LP34931 641 aa30.82■■■□□ 2.52
NCKIPSD-209ENST00000470006 ADGBQ8N7X0 1667 aa30.81■■■□□ 2.52
NCKIPSD-209ENST00000470006 TOM1O60784 492 aa30.8■■■□□ 2.52
NCKIPSD-209ENST00000470006 A2ML1A8K2U0 1454 aa30.8■■■□□ 2.52
NCKIPSD-209ENST00000470006 MTUS2Q5JR59 1369 aa30.78■■■□□ 2.52
NCKIPSD-209ENST00000470006 DNMT1P26358 1616 aaKnown RBP30.77■■■□□ 2.52
NCKIPSD-209ENST00000470006 ZNF644Q9H582 1327 aaPredicted RBP30.74■■■□□ 2.51
NCKIPSD-209ENST00000470006 MED1Q15648 1581 aaPredicted RBP30.72■■■□□ 2.51
NCKIPSD-209ENST00000470006 POLR1AO95602 1720 aaPredicted RBP30.72■■■□□ 2.51
NCKIPSD-209ENST00000470006 TNRQ92752 1358 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms