RNA–Protein interactions for RNA: ENST00000469655.5

KCNC4-206, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 3,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-206ENST00000469655 CCER2I3L3R5 266 aa20.69■□□□□ 0.9
KCNC4-206ENST00000469655 ABCA5Q8WWZ7 1642 aa20.68■□□□□ 0.9
KCNC4-206ENST00000469655 ZNF644Q9H582 1327 aaPredicted RBP20.66■□□□□ 0.9
KCNC4-206ENST00000469655 VSIG10Q8N0Z9 540 aa20.66■□□□□ 0.9
KCNC4-206ENST00000469655 ZNF608Q9ULD9 1512 aaPredicted RBP20.66■□□□□ 0.9
KCNC4-206ENST00000469655 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
KCNC4-206ENST00000469655 GRIN2BQ13224 1484 aa20.65■□□□□ 0.9
KCNC4-206ENST00000469655 NAIPQ13075 1403 aa20.64■□□□□ 0.9
KCNC4-206ENST00000469655 CHMP7Q8WUX9 453 aaPredicted RBP20.63■□□□□ 0.89
KCNC4-206ENST00000469655 HFM1A2PYH4 1435 aa20.63■□□□□ 0.89
KCNC4-206ENST00000469655 UACAQ9BZF9 1416 aa20.61■□□□□ 0.89
KCNC4-206ENST00000469655 MRS2Q9HD23 443 aa20.61■□□□□ 0.89
KCNC4-206ENST00000469655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.61■□□□□ 0.89
KCNC4-206ENST00000469655 MAGI3Q5TCQ9 1506 aa20.6■□□□□ 0.89
KCNC4-206ENST00000469655 HSPA5P11021 654 aaKnown RBP20.58■□□□□ 0.89
KCNC4-206ENST00000469655 SAMD9Q5K651 1589 aa20.58■□□□□ 0.88
KCNC4-206ENST00000469655 MPHOSPH9Q99550 1183 aa20.57■□□□□ 0.88
KCNC4-206ENST00000469655 PODXL2Q9NZ53 605 aa20.57■□□□□ 0.88
KCNC4-206ENST00000469655 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
KCNC4-206ENST00000469655 MRC2Q9UBG0 1479 aa20.55■□□□□ 0.88
KCNC4-206ENST00000469655 EPRSP07814 1512 aaKnown RBP20.55■□□□□ 0.88
KCNC4-206ENST00000469655 KDM2AQ9Y2K7 1162 aa20.55■□□□□ 0.88
KCNC4-206ENST00000469655 LRRIQ1Q96JM4 1722 aa20.54■□□□□ 0.88
KCNC4-206ENST00000469655 PTPN23Q9H3S7 1636 aa20.54■□□□□ 0.88
KCNC4-206ENST00000469655 EHBP1L1Q8N3D4 1523 aa20.53■□□□□ 0.88
KCNC4-206ENST00000469655 GLIPR1L2Q4G1C9 344 aa20.53■□□□□ 0.88
KCNC4-206ENST00000469655 ERCC6Q03468 1493 aa20.53■□□□□ 0.88
KCNC4-206ENST00000469655 SUPT6HQ7KZ85 1726 aaKnown RBP20.53■□□□□ 0.88
KCNC4-206ENST00000469655 IQGAP2Q13576 1575 aa20.53■□□□□ 0.88
KCNC4-206ENST00000469655 SLC4A1APQ9BWU0 796 aaKnown RBP20.52■□□□□ 0.88
KCNC4-206ENST00000469655 L3MBTL2Q969R5 705 aa20.52■□□□□ 0.88
KCNC4-206ENST00000469655 ZMYND15Q9H091 742 aa20.52■□□□□ 0.88
KCNC4-206ENST00000469655 CFDP1Q9UEE9 299 aaPredicted RBP20.49■□□□□ 0.87
KCNC4-206ENST00000469655 UGGT2Q9NYU1 1516 aa20.48■□□□□ 0.87
KCNC4-206ENST00000469655 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
KCNC4-206ENST00000469655 WASHC2AQ641Q2 1341 aa20.47■□□□□ 0.87
KCNC4-206ENST00000469655 GSE1Q14687 1217 aa20.46■□□□□ 0.87
KCNC4-206ENST00000469655 EIF4G2P78344 907 aaKnown RBP eCLIP20.45■□□□□ 0.86
KCNC4-206ENST00000469655 C11orf95C9JLR9 678 aaPredicted RBP20.44■□□□□ 0.86
KCNC4-206ENST00000469655 ARXQ96QS3 562 aa20.44■□□□□ 0.86
KCNC4-206ENST00000469655 HECW1Q76N89 1606 aa20.43■□□□□ 0.86
KCNC4-206ENST00000469655 ADAMTS12P58397 1594 aa20.43■□□□□ 0.86
KCNC4-206ENST00000469655 PBRM1Q86U86 1689 aa20.43■□□□□ 0.86
KCNC4-206ENST00000469655 SLC4A3P48751 1232 aa20.43■□□□□ 0.86
KCNC4-206ENST00000469655 RSPH6AQ9H0K4 717 aa20.43■□□□□ 0.86
KCNC4-206ENST00000469655 PRG4Q92954 1404 aaPredicted RBP20.42■□□□□ 0.86
KCNC4-206ENST00000469655 FRAT1Q92837 279 aaPredicted RBP20.42■□□□□ 0.86
KCNC4-206ENST00000469655 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
KCNC4-206ENST00000469655 KDM6BO15054 1643 aa20.4■□□□□ 0.86
KCNC4-206ENST00000469655 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
KCNC4-206ENST00000469655 PPM1GO15355 546 aaPredicted RBP20.38■□□□□ 0.85
KCNC4-206ENST00000469655 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
KCNC4-206ENST00000469655 DAXXQ9UER7 740 aaPredicted RBP20.38■□□□□ 0.85
KCNC4-206ENST00000469655 PLB1Q6P1J6 1458 aa20.37■□□□□ 0.85
KCNC4-206ENST00000469655 NBPF8Q3BBV2 869 aa20.37■□□□□ 0.85
KCNC4-206ENST00000469655 USP35Q9P2H5 1018 aa20.37■□□□□ 0.85
KCNC4-206ENST00000469655 KIAA0586Q9BVV6 1533 aa20.36■□□□□ 0.85
KCNC4-206ENST00000469655 WASHC2CQ9Y4E1 1318 aa20.35■□□□□ 0.85
KCNC4-206ENST00000469655 A0A0U1RQG5 324 aaPredicted RBP20.35■□□□□ 0.85
KCNC4-206ENST00000469655 ARID4BQ4LE39 1312 aaPredicted RBP20.35■□□□□ 0.85
KCNC4-206ENST00000469655 WDR62O43379 1518 aa20.35■□□□□ 0.85
KCNC4-206ENST00000469655 NUP153P49790 1475 aaKnown RBP20.34■□□□□ 0.85
KCNC4-206ENST00000469655 DISP1Q96F81 1524 aa20.34■□□□□ 0.85
KCNC4-206ENST00000469655 GRIN2AQ12879 1464 aa20.34■□□□□ 0.85
KCNC4-206ENST00000469655 DAPK1P53355 1430 aa20.33■□□□□ 0.85
KCNC4-206ENST00000469655 MIA2Q96PC5 1412 aa20.33■□□□□ 0.85
KCNC4-206ENST00000469655 PLEKHD1A6NEE1 506 aa20.33■□□□□ 0.84
KCNC4-206ENST00000469655 ABCC5O15440 1437 aa20.32■□□□□ 0.84
KCNC4-206ENST00000469655 DENND4BO75064 1496 aaPredicted RBP20.32■□□□□ 0.84
KCNC4-206ENST00000469655 RGL3Q3MIN7 710 aa20.32■□□□□ 0.84
KCNC4-206ENST00000469655 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
KCNC4-206ENST00000469655 NAP1L5Q96NT1 182 aaPredicted RBP20.32■□□□□ 0.84
KCNC4-206ENST00000469655 TCOF1Q13428 1488 aaKnown RBP20.3■□□□□ 0.84
KCNC4-206ENST00000469655 PKD2Q13563 968 aa20.3■□□□□ 0.84
KCNC4-206ENST00000469655 NFKBIBQ15653 356 aa20.29■□□□□ 0.84
KCNC4-206ENST00000469655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.84
KCNC4-206ENST00000469655 AKNAQ7Z591 1439 aa20.26■□□□□ 0.83
KCNC4-206ENST00000469655 HNRNPMP52272 730 aaKnown RBP eCLIP20.26■□□□□ 0.83
KCNC4-206ENST00000469655 KIAA0556O60303 1618 aa20.26■□□□□ 0.83
KCNC4-206ENST00000469655 SKAP1Q86WV1 359 aa20.25■□□□□ 0.83
KCNC4-206ENST00000469655 EIF4G3O43432 1585 aaKnown RBP20.25■□□□□ 0.83
KCNC4-206ENST00000469655 PDE4AP27815 886 aa20.24■□□□□ 0.83
KCNC4-206ENST00000469655 ANKRD30BQ9BXX2 1392 aa20.23■□□□□ 0.83
KCNC4-206ENST00000469655 HSP90AA2PQ14568 343 aaPredicted RBP20.23■□□□□ 0.83
KCNC4-206ENST00000469655 KDM5BQ9UGL1 1544 aa20.22■□□□□ 0.83
KCNC4-206ENST00000469655 TSPY4P0CV99 314 aa20.22■□□□□ 0.83
KCNC4-206ENST00000469655 TSPY10P0CW01 314 aa20.22■□□□□ 0.83
KCNC4-206ENST00000469655 TROQ12816 1431 aaPredicted RBP20.22■□□□□ 0.83
KCNC4-206ENST00000469655 CARMIL2Q6F5E8 1435 aa20.22■□□□□ 0.83
KCNC4-206ENST00000469655 TMC1Q8TDI8 760 aa20.21■□□□□ 0.83
KCNC4-206ENST00000469655 DCAF11Q8TEB1 546 aa20.21■□□□□ 0.83
KCNC4-206ENST00000469655 PRKRIP1Q9H875 184 aaPredicted RBP20.19■□□□□ 0.82
KCNC4-206ENST00000469655 RAPGEF6Q8TEU7 1601 aa20.19■□□□□ 0.82
KCNC4-206ENST00000469655 FAM43AQ8N2R8 423 aa20.18■□□□□ 0.82
KCNC4-206ENST00000469655 NUP155O75694 1391 aa20.18■□□□□ 0.82
KCNC4-206ENST00000469655 CAMSAP2Q08AD1 1489 aa20.17■□□□□ 0.82
KCNC4-206ENST00000469655 KIF7Q2M1P5 1343 aa20.17■□□□□ 0.82
KCNC4-206ENST00000469655 CCDC7Q96M83 1385 aa20.17■□□□□ 0.82
KCNC4-206ENST00000469655 SYNJ2O15056 1496 aa20.16■□□□□ 0.82
KCNC4-206ENST00000469655 ROCK1Q13464 1354 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms