RNA–Protein interactions for RNA: ENST00000469420.1

CBX6-203, Transcript of chromobox 6, humanhuman

TSL 2

Gene CBX6, Length 2,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-203ENST00000469420 ABCC5O15440 1437 aa24.11■■□□□ 1.45
CBX6-203ENST00000469420 SUPT16HQ9Y5B9 1047 aaKnown RBP24.11■■□□□ 1.45
CBX6-203ENST00000469420 JPH4Q96JJ6 628 aa24.09■■□□□ 1.45
CBX6-203ENST00000469420 TRIM52Q96A61 297 aa24.08■■□□□ 1.45
CBX6-203ENST00000469420 TROQ12816 1431 aaPredicted RBP24.08■■□□□ 1.44
CBX6-203ENST00000469420 ADCY10Q96PN6 1610 aa24.07■■□□□ 1.44
CBX6-203ENST00000469420 ITSN2Q9NZM3 1697 aa24.03■■□□□ 1.44
CBX6-203ENST00000469420 ABCA8O94911 1581 aa24.02■■□□□ 1.44
CBX6-203ENST00000469420 CARMIL2Q6F5E8 1435 aa24.02■■□□□ 1.44
CBX6-203ENST00000469420 ROCK1Q13464 1354 aa24.02■■□□□ 1.44
CBX6-203ENST00000469420 ANP32CO43423 234 aa24.02■■□□□ 1.44
CBX6-203ENST00000469420 CAMSAP2Q08AD1 1489 aa24.01■■□□□ 1.43
CBX6-203ENST00000469420 GPATCH8Q9UKJ3 1502 aaKnown RBP24.01■■□□□ 1.43
CBX6-203ENST00000469420 CDK11AQ9UQ88 783 aaPredicted RBP24.01■■□□□ 1.43
CBX6-203ENST00000469420 FOXD1Q16676 465 aa24■■□□□ 1.43
CBX6-203ENST00000469420 MPHOSPH9Q99550 1183 aa24■■□□□ 1.43
CBX6-203ENST00000469420 CCER2I3L3R5 266 aa23.98■■□□□ 1.43
CBX6-203ENST00000469420 CDC42BPAQ5VT25 1732 aa23.97■■□□□ 1.43
CBX6-203ENST00000469420 CROCC2H7BZ55 1655 aa23.97■■□□□ 1.43
CBX6-203ENST00000469420 ADGBQ8N7X0 1667 aa23.96■■□□□ 1.43
CBX6-203ENST00000469420 CHD1O14646 1710 aa23.94■■□□□ 1.42
CBX6-203ENST00000469420 ATP10BO94823 1461 aa23.93■■□□□ 1.42
CBX6-203ENST00000469420 CFDP1Q9UEE9 299 aaPredicted RBP23.93■■□□□ 1.42
CBX6-203ENST00000469420 HSPA5P11021 654 aaKnown RBP23.9■■□□□ 1.42
CBX6-203ENST00000469420 ABCC10Q5T3U5 1492 aa23.89■■□□□ 1.42
CBX6-203ENST00000469420 ANKRD30BQ9BXX2 1392 aa23.88■■□□□ 1.41
CBX6-203ENST00000469420 L3MBTL2Q969R5 705 aa23.88■■□□□ 1.41
CBX6-203ENST00000469420 ZNF777Q9ULD5 760 aaPredicted RBP23.88■■□□□ 1.41
CBX6-203ENST00000469420 NCOA1Q15788 1441 aa23.88■■□□□ 1.41
CBX6-203ENST00000469420 PZPP20742 1482 aa23.87■■□□□ 1.41
CBX6-203ENST00000469420 RPRD2Q5VT52 1461 aaKnown RBP23.87■■□□□ 1.41
CBX6-203ENST00000469420 WASHC2AQ641Q2 1341 aa23.86■■□□□ 1.41
CBX6-203ENST00000469420 ADGRL2O95490 1459 aa23.85■■□□□ 1.41
CBX6-203ENST00000469420 TEX14Q8IWB6 1497 aa23.85■■□□□ 1.41
CBX6-203ENST00000469420 EIF4G2P78344 907 aaKnown RBP eCLIP23.82■■□□□ 1.4
CBX6-203ENST00000469420 SLC4A1APQ9BWU0 796 aaKnown RBP23.8■■□□□ 1.4
CBX6-203ENST00000469420 PLEKHD1A6NEE1 506 aa23.8■■□□□ 1.4
CBX6-203ENST00000469420 PTPRGP23470 1445 aa23.77■■□□□ 1.4
CBX6-203ENST00000469420 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
CBX6-203ENST00000469420 CDC42BPBQ9Y5S2 1711 aa23.76■■□□□ 1.39
CBX6-203ENST00000469420 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
CBX6-203ENST00000469420 NBPF8Q3BBV2 869 aa23.76■■□□□ 1.39
CBX6-203ENST00000469420 FKBP8Q14318 412 aa23.74■■□□□ 1.39
CBX6-203ENST00000469420 CNTLNQ9NXG0 1405 aa23.74■■□□□ 1.39
CBX6-203ENST00000469420 BCANQ96GW7 911 aa23.74■■□□□ 1.39
CBX6-203ENST00000469420 ANKRD30AQ9BXX3 1397 aa23.71■■□□□ 1.39
CBX6-203ENST00000469420 C9orf84Q5VXU9 1444 aa23.7■■□□□ 1.38
CBX6-203ENST00000469420 SHANK2Q9UPX8 1470 aa23.7■■□□□ 1.38
CBX6-203ENST00000469420 C11orf95C9JLR9 678 aaPredicted RBP23.7■■□□□ 1.38
CBX6-203ENST00000469420 SAMD9LQ8IVG5 1584 aa23.7■■□□□ 1.38
CBX6-203ENST00000469420 ANKRD50Q9ULJ7 1429 aa23.69■■□□□ 1.38
CBX6-203ENST00000469420 CCDC7Q96M83 1385 aa23.69■■□□□ 1.38
CBX6-203ENST00000469420 PREX2Q70Z35 1606 aa23.69■■□□□ 1.38
CBX6-203ENST00000469420 POLR1AO95602 1720 aaPredicted RBP23.68■■□□□ 1.38
CBX6-203ENST00000469420 MBD5Q9P267 1494 aa23.67■■□□□ 1.38
CBX6-203ENST00000469420 KIAA1107Q9UPP5 1409 aa23.67■■□□□ 1.38
CBX6-203ENST00000469420 ARHGEF5Q12774 1597 aa23.66■■□□□ 1.38
CBX6-203ENST00000469420 HNRNPMP52272 730 aaKnown RBP eCLIP23.65■■□□□ 1.38
CBX6-203ENST00000469420 TTC37Q6PGP7 1564 aa23.65■■□□□ 1.38
CBX6-203ENST00000469420 SPATA31E1Q6ZUB1 1445 aa23.65■■□□□ 1.38
CBX6-203ENST00000469420 PKD2Q13563 968 aa23.63■■□□□ 1.37
CBX6-203ENST00000469420 TSHZ2Q9NRE2 1034 aa23.63■■□□□ 1.37
CBX6-203ENST00000469420 NEFLP07196 543 aa23.63■■□□□ 1.37
CBX6-203ENST00000469420 HNRNPUQ00839 825 aaKnown RBP eCLIP23.62■■□□□ 1.37
CBX6-203ENST00000469420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.59■■□□□ 1.37
CBX6-203ENST00000469420 KIF7Q2M1P5 1343 aa23.58■■□□□ 1.37
CBX6-203ENST00000469420 KDM5DQ9BY66 1539 aa23.58■■□□□ 1.37
CBX6-203ENST00000469420 KIF15Q9NS87 1388 aa23.57■■□□□ 1.36
CBX6-203ENST00000469420 CCDC184Q52MB2 194 aa23.57■■□□□ 1.36
CBX6-203ENST00000469420 ABCC2Q92887 1545 aa23.57■■□□□ 1.36
CBX6-203ENST00000469420 NUP155O75694 1391 aa23.57■■□□□ 1.36
CBX6-203ENST00000469420 CCDC141Q6ZP82 1450 aa23.55■■□□□ 1.36
CBX6-203ENST00000469420 SYCP2Q9BX26 1530 aa23.55■■□□□ 1.36
CBX6-203ENST00000469420 PRKRIP1Q9H875 184 aaPredicted RBP23.55■■□□□ 1.36
CBX6-203ENST00000469420 TSPY4P0CV99 314 aa23.54■■□□□ 1.36
CBX6-203ENST00000469420 TSPY10P0CW01 314 aa23.54■■□□□ 1.36
CBX6-203ENST00000469420 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
CBX6-203ENST00000469420 MYO5CQ9NQX4 1742 aa23.52■■□□□ 1.36
CBX6-203ENST00000469420 BCORL1Q5H9F3 1711 aa23.52■■□□□ 1.36
CBX6-203ENST00000469420 ZNF326Q5BKZ1 582 aaKnown RBP23.51■■□□□ 1.35
CBX6-203ENST00000469420 ARHGAP5Q13017 1502 aa23.5■■□□□ 1.35
CBX6-203ENST00000469420 USP47Q96K76 1375 aa23.49■■□□□ 1.35
CBX6-203ENST00000469420 KDM5CP41229 1560 aa23.49■■□□□ 1.35
CBX6-203ENST00000469420 ZCCHC11Q5TAX3 1644 aaKnown RBP23.49■■□□□ 1.35
CBX6-203ENST00000469420 MAST1Q9Y2H9 1570 aa23.46■■□□□ 1.35
CBX6-203ENST00000469420 FAM135AQ9P2D6 1515 aa23.45■■□□□ 1.34
CBX6-203ENST00000469420 MRS2Q9HD23 443 aa23.45■■□□□ 1.34
CBX6-203ENST00000469420 ARHGEF12Q9NZN5 1544 aa23.45■■□□□ 1.34
CBX6-203ENST00000469420 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
CBX6-203ENST00000469420 UHRF1BP1Q6BDS2 1440 aa23.43■■□□□ 1.34
CBX6-203ENST00000469420 FAM9BQ8IZU0 186 aa23.43■■□□□ 1.34
CBX6-203ENST00000469420 UNC13BO14795 1591 aa23.41■■□□□ 1.34
CBX6-203ENST00000469420 DHX29Q7Z478 1369 aaKnown RBP23.39■■□□□ 1.33
CBX6-203ENST00000469420 PLXNC1O60486 1568 aa23.39■■□□□ 1.33
CBX6-203ENST00000469420 POLR3GLQ9BT43 218 aa23.37■■□□□ 1.33
CBX6-203ENST00000469420 RSPH4AQ5TD94 716 aa23.37■■□□□ 1.33
CBX6-203ENST00000469420 IRX6P78412 446 aaPredicted RBP23.36■■□□□ 1.33
CBX6-203ENST00000469420 UHRF1BP1LA0JNW5 1464 aa23.36■■□□□ 1.33
CBX6-203ENST00000469420 PLEKHH2Q8IVE3 1493 aa23.34■■□□□ 1.33
CBX6-203ENST00000469420 PLA2R1Q13018 1463 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms