RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
TRAIP-202ENST00000469027 CTTNBP2Q8WZ74 1663 aa18.67■□□□□ 0.58
TRAIP-202ENST00000469027 ZMYM4Q5VZL5 1548 aa18.67■□□□□ 0.58
TRAIP-202ENST00000469027 ARHGEF12Q9NZN5 1544 aa18.67■□□□□ 0.58
TRAIP-202ENST00000469027 SETD1BQ9UPS6 1966 aaKnown RBP18.65■□□□□ 0.58
TRAIP-202ENST00000469027 CFAP74Q9C0B2 1584 aa18.63■□□□□ 0.57
TRAIP-202ENST00000469027 MAGI2Q86UL8 1455 aa18.62■□□□□ 0.57
TRAIP-202ENST00000469027 HSPA1LP34931 641 aa18.61■□□□□ 0.57
TRAIP-202ENST00000469027 P3H3Q8IVL6 736 aa18.61■□□□□ 0.57
TRAIP-202ENST00000469027 HECW1Q76N89 1606 aa18.6■□□□□ 0.57
TRAIP-202ENST00000469027 ZNF335Q9H4Z2 1342 aaPredicted RBP18.59■□□□□ 0.57
TRAIP-202ENST00000469027 PIP4K2BP78356 416 aa18.57■□□□□ 0.56
TRAIP-202ENST00000469027 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
TRAIP-202ENST00000469027 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
TRAIP-202ENST00000469027 ATP10AO60312 1499 aa18.56■□□□□ 0.56
TRAIP-202ENST00000469027 ESF1Q9H501 851 aaKnown RBP18.52■□□□□ 0.56
TRAIP-202ENST00000469027 RAPGEF6Q8TEU7 1601 aa18.51■□□□□ 0.55
TRAIP-202ENST00000469027 SCAPERQ9BY12 1400 aa18.49■□□□□ 0.55
TRAIP-202ENST00000469027 C3P01024 1663 aa18.49■□□□□ 0.55
TRAIP-202ENST00000469027 CAMSAP1Q5T5Y3 1602 aa18.49■□□□□ 0.55
TRAIP-202ENST00000469027 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
TRAIP-202ENST00000469027 TRAPPC8Q9Y2L5 1435 aa18.48■□□□□ 0.55
TRAIP-202ENST00000469027 NCKAP5LQ9HCH0 1330 aa18.48■□□□□ 0.55
TRAIP-202ENST00000469027 MYT1LQ9UL68 1186 aa18.47■□□□□ 0.55
TRAIP-202ENST00000469027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.46■□□□□ 0.55
TRAIP-202ENST00000469027 TOM1O60784 492 aa18.45■□□□□ 0.54
TRAIP-202ENST00000469027 NUP153P49790 1475 aaKnown RBP18.41■□□□□ 0.54
TRAIP-202ENST00000469027 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
TRAIP-202ENST00000469027 PKD2Q13563 968 aa18.36■□□□□ 0.53
TRAIP-202ENST00000469027 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
TRAIP-202ENST00000469027 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.52
TRAIP-202ENST00000469027 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
TRAIP-202ENST00000469027 PLCH2O75038 1416 aa18.32■□□□□ 0.52
TRAIP-202ENST00000469027 CNTLNQ9NXG0 1405 aa18.31■□□□□ 0.52
TRAIP-202ENST00000469027 SAMD9Q5K651 1589 aa18.3■□□□□ 0.52
TRAIP-202ENST00000469027 DIP2CQ9Y2E4 1556 aa18.3■□□□□ 0.52
TRAIP-202ENST00000469027 EFCAB2Q5VUJ9 269 aa18.3■□□□□ 0.52
TRAIP-202ENST00000469027 PLA2R1Q13018 1463 aa18.29■□□□□ 0.52
TRAIP-202ENST00000469027 AFAP1Q8N556 730 aa18.29■□□□□ 0.52
TRAIP-202ENST00000469027 RANGAP1P46060 587 aaPredicted RBP18.28■□□□□ 0.52
TRAIP-202ENST00000469027 NPATQ14207 1427 aa18.28■□□□□ 0.52
TRAIP-202ENST00000469027 RGS17Q9UGC6 210 aaPredicted RBP18.27■□□□□ 0.52
TRAIP-202ENST00000469027 AGLP35573 1532 aa18.27■□□□□ 0.51
TRAIP-202ENST00000469027 REREQ9P2R6 1566 aa18.26■□□□□ 0.51
TRAIP-202ENST00000469027 PTPRKQ15262 1439 aa18.26■□□□□ 0.51
TRAIP-202ENST00000469027 CPS1P31327 1500 aa18.26■□□□□ 0.51
TRAIP-202ENST00000469027 TCOF1Q13428 1488 aaKnown RBP18.26■□□□□ 0.51
TRAIP-202ENST00000469027 PRXQ9BXM0 1461 aa18.25■□□□□ 0.51
TRAIP-202ENST00000469027 KDM5CP41229 1560 aa18.25■□□□□ 0.51
TRAIP-202ENST00000469027 ABCA6Q8N139 1617 aa18.24■□□□□ 0.51
TRAIP-202ENST00000469027 MYO5CQ9NQX4 1742 aa18.23■□□□□ 0.51
TRAIP-202ENST00000469027 MYO3AQ8NEV4 1616 aa18.23■□□□□ 0.51
TRAIP-202ENST00000469027 ZNF142P52746 1687 aaPredicted RBP18.22■□□□□ 0.51
TRAIP-202ENST00000469027 CEP170BQ9Y4F5 1589 aaPredicted RBP18.21■□□□□ 0.51
TRAIP-202ENST00000469027 ZMYM3Q14202 1370 aa18.2■□□□□ 0.5
TRAIP-202ENST00000469027 SHANK2Q9UPX8 1470 aa18.2■□□□□ 0.5
TRAIP-202ENST00000469027 MROH2AA6NES4 1674 aa18.19■□□□□ 0.5
TRAIP-202ENST00000469027 ARHGAP5Q13017 1502 aa18.18■□□□□ 0.5
TRAIP-202ENST00000469027 CDK13Q14004 1512 aaKnown RBP18.18■□□□□ 0.5
TRAIP-202ENST00000469027 POTEAQ6S8J7 498 aa18.18■□□□□ 0.5
TRAIP-202ENST00000469027 MLH3Q9UHC1 1453 aa18.15■□□□□ 0.5
TRAIP-202ENST00000469027 ALKQ9UM73 1620 aa18.15■□□□□ 0.5
TRAIP-202ENST00000469027 SETD1AO15047 1707 aaKnown RBP18.15■□□□□ 0.5
TRAIP-202ENST00000469027 POLR1AO95602 1720 aaPredicted RBP18.1■□□□□ 0.49
TRAIP-202ENST00000469027 CLTCQ00610 1675 aaKnown RBP18.1■□□□□ 0.49
TRAIP-202ENST00000469027 ATP1B4Q9UN42 357 aaPredicted RBP18.1■□□□□ 0.49
TRAIP-202ENST00000469027 A2ML1A8K2U0 1454 aa18.07■□□□□ 0.48
TRAIP-202ENST00000469027 KIF14Q15058 1648 aa18.06■□□□□ 0.48
TRAIP-202ENST00000469027 NEURL4Q96JN8 1562 aa18.06■□□□□ 0.48
TRAIP-202ENST00000469027 DNMT1P26358 1616 aaKnown RBP18.05■□□□□ 0.48
TRAIP-202ENST00000469027 VWDEQ8N2E2 1590 aa18.04■□□□□ 0.48
TRAIP-202ENST00000469027 KIDINS220Q9ULH0 1771 aa18.04■□□□□ 0.48
TRAIP-202ENST00000469027 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
TRAIP-202ENST00000469027 RNF17Q9BXT8 1623 aaKnown RBP18.04■□□□□ 0.48
TRAIP-202ENST00000469027 ANKLE2Q86XL3 938 aa18.01■□□□□ 0.47
TRAIP-202ENST00000469027 ABCC1P33527 1531 aa18■□□□□ 0.47
TRAIP-202ENST00000469027 GGT6Q6P531 493 aa18■□□□□ 0.47
TRAIP-202ENST00000469027 UPF1Q92900 1129 aaKnown RBP eCLIP18■□□□□ 0.47
TRAIP-202ENST00000469027 ITSN2Q9NZM3 1697 aa17.99■□□□□ 0.47
TRAIP-202ENST00000469027 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
TRAIP-202ENST00000469027 CLIP1P30622 1438 aa17.98■□□□□ 0.47
TRAIP-202ENST00000469027 CDC42BPBQ9Y5S2 1711 aa17.97■□□□□ 0.47
TRAIP-202ENST00000469027 NPHP4O75161 1426 aaPredicted RBP17.97■□□□□ 0.47
TRAIP-202ENST00000469027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.96■□□□□ 0.47
TRAIP-202ENST00000469027 TROQ12816 1431 aaPredicted RBP17.95■□□□□ 0.46
TRAIP-202ENST00000469027 SYNMO15061 1565 aa17.94■□□□□ 0.46
TRAIP-202ENST00000469027 SPAG9O60271 1321 aaKnown RBP17.92■□□□□ 0.46
TRAIP-202ENST00000469027 TNRQ92752 1358 aa17.91■□□□□ 0.46
TRAIP-202ENST00000469027 SRCAPQ6ZRS2 3230 aa17.91■□□□□ 0.46
TRAIP-202ENST00000469027 STRCP1A6NGW2 1772 aa17.91■□□□□ 0.46
TRAIP-202ENST00000469027 SAMD9LQ8IVG5 1584 aa17.91■□□□□ 0.46
TRAIP-202ENST00000469027 PREX2Q70Z35 1606 aa17.9■□□□□ 0.46
TRAIP-202ENST00000469027 THEMISQ8N1K5 641 aaPredicted RBP17.9■□□□□ 0.46
TRAIP-202ENST00000469027 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
TRAIP-202ENST00000469027 TRIM52Q96A61 297 aa17.9■□□□□ 0.46
TRAIP-202ENST00000469027 IQGAP1P46940 1657 aa17.89■□□□□ 0.45
TRAIP-202ENST00000469027 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
TRAIP-202ENST00000469027 A2MP01023 1474 aa17.88■□□□□ 0.45
TRAIP-202ENST00000469027 FBXO31Q5XUX0 539 aaPredicted RBP17.87■□□□□ 0.45
TRAIP-202ENST00000469027 MED14O60244 1454 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms