RNA–Protein interactions for RNA: ENST00000468790.1

CASP7-208, Transcript of caspase 7, humanhuman

TSL 2

Gene CASP7, Length 607 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-208ENST00000468790 PREX1Q8TCU6 1659 aa15.6■□□□□ 0.09
CASP7-208ENST00000468790 POTEAQ6S8J7 498 aa15.6■□□□□ 0.09
CASP7-208ENST00000468790 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
CASP7-208ENST00000468790 FYCO1Q9BQS8 1478 aa15.59■□□□□ 0.09
CASP7-208ENST00000468790 HECW1Q76N89 1606 aa15.58■□□□□ 0.09
CASP7-208ENST00000468790 RAPGEF6Q8TEU7 1601 aa15.57■□□□□ 0.08
CASP7-208ENST00000468790 LRRIQ1Q96JM4 1722 aa15.57■□□□□ 0.08
CASP7-208ENST00000468790 ARAP3Q8WWN8 1544 aa15.56■□□□□ 0.08
CASP7-208ENST00000468790 PTPRGP23470 1445 aa15.55■□□□□ 0.08
CASP7-208ENST00000468790 CASKIN1Q8WXD9 1431 aa15.54■□□□□ 0.08
CASP7-208ENST00000468790 ABCA8O94911 1581 aa15.53■□□□□ 0.08
CASP7-208ENST00000468790 PIP4K2BP78356 416 aa15.53■□□□□ 0.08
CASP7-208ENST00000468790 UPF1Q92900 1129 aaKnown RBP eCLIP15.53■□□□□ 0.08
CASP7-208ENST00000468790 CD109Q6YHK3 1445 aa15.52■□□□□ 0.08
CASP7-208ENST00000468790 P3H3Q8IVL6 736 aa15.52■□□□□ 0.08
CASP7-208ENST00000468790 TTBK1Q5TCY1 1321 aaPredicted RBP15.51■□□□□ 0.07
CASP7-208ENST00000468790 MAP3K1Q13233 1512 aa15.51■□□□□ 0.07
CASP7-208ENST00000468790 TIAM1Q13009 1591 aa15.5■□□□□ 0.07
CASP7-208ENST00000468790 ZNF335Q9H4Z2 1342 aaPredicted RBP15.5■□□□□ 0.07
CASP7-208ENST00000468790 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
CASP7-208ENST00000468790 UHRF1BP1LA0JNW5 1464 aa15.5■□□□□ 0.07
CASP7-208ENST00000468790 CCDC18Q5T9S5 1454 aa15.48■□□□□ 0.07
CASP7-208ENST00000468790 TTC37Q6PGP7 1564 aa15.48■□□□□ 0.07
CASP7-208ENST00000468790 KDM5BQ9UGL1 1544 aa15.48■□□□□ 0.07
CASP7-208ENST00000468790 SIGLEC1Q9BZZ2 1709 aa15.46■□□□□ 0.06
CASP7-208ENST00000468790 RAPGEF3O95398 923 aa15.45■□□□□ 0.06
CASP7-208ENST00000468790 ZCCHC11Q5TAX3 1644 aaKnown RBP15.44■□□□□ 0.06
CASP7-208ENST00000468790 NUP153P49790 1475 aaKnown RBP15.44■□□□□ 0.06
CASP7-208ENST00000468790 FRMPD1Q5SYB0 1578 aa15.41■□□□□ 0.06
CASP7-208ENST00000468790 WDR7Q9Y4E6 1490 aa15.41■□□□□ 0.06
CASP7-208ENST00000468790 UACAQ9BZF9 1416 aa15.41■□□□□ 0.06
CASP7-208ENST00000468790 CEBPAP49715 358 aaPredicted RBP15.4■□□□□ 0.06
CASP7-208ENST00000468790 FER1L4A9Z1Z3 1794 aa15.39■□□□□ 0.05
CASP7-208ENST00000468790 CDK13Q14004 1512 aaKnown RBP15.39■□□□□ 0.05
CASP7-208ENST00000468790 EHBP1L1Q8N3D4 1523 aa15.39■□□□□ 0.05
CASP7-208ENST00000468790 UHRF1BP1Q6BDS2 1440 aa15.38■□□□□ 0.05
CASP7-208ENST00000468790 ALKQ9UM73 1620 aa15.37■□□□□ 0.05
CASP7-208ENST00000468790 APLP2Q06481 763 aa15.37■□□□□ 0.05
CASP7-208ENST00000468790 NCOA1Q15788 1441 aa15.36■□□□□ 0.05
CASP7-208ENST00000468790 LRRC9Q6ZRR7 1453 aa15.36■□□□□ 0.05
CASP7-208ENST00000468790 SUPT6HQ7KZ85 1726 aaKnown RBP15.36■□□□□ 0.05
CASP7-208ENST00000468790 ARHGEF40Q8TER5 1519 aa15.36■□□□□ 0.05
CASP7-208ENST00000468790 ATP10BO94823 1461 aa15.32■□□□□ 0.04
CASP7-208ENST00000468790 TOM1O60784 492 aa15.31■□□□□ 0.04
CASP7-208ENST00000468790 ATP1B4Q9UN42 357 aaPredicted RBP15.31■□□□□ 0.04
CASP7-208ENST00000468790 KIF14Q15058 1648 aa15.29■□□□□ 0.04
CASP7-208ENST00000468790 MLECQ14165 292 aa15.29■□□□□ 0.04
CASP7-208ENST00000468790 SETD1BQ9UPS6 1966 aaKnown RBP15.29■□□□□ 0.04
CASP7-208ENST00000468790 POGZQ7Z3K3 1410 aa15.28■□□□□ 0.04
CASP7-208ENST00000468790 KCNH8Q96L42 1107 aa15.28■□□□□ 0.04
CASP7-208ENST00000468790 MTUS2Q5JR59 1369 aa15.27■□□□□ 0.04
CASP7-208ENST00000468790 ITSN2Q9NZM3 1697 aa15.27■□□□□ 0.03
CASP7-208ENST00000468790 TROQ12816 1431 aaPredicted RBP15.26■□□□□ 0.03
CASP7-208ENST00000468790 FANCAO15360 1455 aa15.26■□□□□ 0.03
CASP7-208ENST00000468790 SETBP1Q9Y6X0 1596 aa15.24■□□□□ 0.03
CASP7-208ENST00000468790 ARHGEF12Q9NZN5 1544 aa15.23■□□□□ 0.03
CASP7-208ENST00000468790 KANK4Q5T7N3 995 aaPredicted RBP15.23■□□□□ 0.03
CASP7-208ENST00000468790 NCOA2Q15596 1464 aa15.22■□□□□ 0.03
CASP7-208ENST00000468790 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
CASP7-208ENST00000468790 ARID3CA6NKF2 412 aa15.21■□□□□ 0.03
CASP7-208ENST00000468790 CDC42BPAQ5VT25 1732 aa15.2■□□□□ 0.02
CASP7-208ENST00000468790 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
CASP7-208ENST00000468790 MYO5CQ9NQX4 1742 aa15.2■□□□□ 0.02
CASP7-208ENST00000468790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
CASP7-208ENST00000468790 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
CASP7-208ENST00000468790 PPARGC1BQ86YN6 1023 aaKnown RBP15.19■□□□□ 0.02
CASP7-208ENST00000468790 PHLDB1Q86UU1 1377 aa15.19■□□□□ 0.02
CASP7-208ENST00000468790 PREX2Q70Z35 1606 aa15.18■□□□□ 0.02
CASP7-208ENST00000468790 RBM33Q96EV2 1170 aaKnown RBP15.18■□□□□ 0.02
CASP7-208ENST00000468790 CAMSAP1Q5T5Y3 1602 aa15.17■□□□□ 0.02
CASP7-208ENST00000468790 ABCA9Q8IUA7 1624 aa15.16■□□□□ 0.02
CASP7-208ENST00000468790 PLEKHD1A6NEE1 506 aa15.15■□□□□ 0.02
CASP7-208ENST00000468790 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.15■□□□□ 0.02
CASP7-208ENST00000468790 MYOM3Q5VTT5 1437 aa15.15■□□□□ 0.02
CASP7-208ENST00000468790 RRBP1Q9P2E9 1410 aaKnown RBP15.15■□□□□ 0.02
CASP7-208ENST00000468790 ZBTB22O15209 634 aa15.14■□□□□ 0.01
CASP7-208ENST00000468790 AKNAQ7Z591 1439 aa15.13■□□□□ 0.01
CASP7-208ENST00000468790 CDC42BPBQ9Y5S2 1711 aa15.13■□□□□ 0.01
CASP7-208ENST00000468790 PTPN23Q9H3S7 1636 aa15.13■□□□□ 0.01
CASP7-208ENST00000468790 CEP350Q5VT06 3117 aa15.12■□□□□ 0.01
CASP7-208ENST00000468790 FGD6Q6ZV73 1430 aa15.11■□□□□ 0.01
CASP7-208ENST00000468790 RICTORQ6R327 1708 aa15.11■□□□□ 0.01
CASP7-208ENST00000468790 MIA2Q96PC5 1412 aa15.1■□□□□ 0.01
CASP7-208ENST00000468790 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
CASP7-208ENST00000468790 TCOF1Q13428 1488 aaKnown RBP15.09■□□□□ 0.01
CASP7-208ENST00000468790 NEO1Q92859 1461 aa15.09■□□□□ 0.01
CASP7-208ENST00000468790 TRIM26Q12899 539 aaPredicted RBP15.09■□□□□ 0.01
CASP7-208ENST00000468790 CCNB3Q8WWL7 1395 aa15.09■□□□□ 0.01
CASP7-208ENST00000468790 PTPRKQ15262 1439 aa15.09■□□□□ 0.01
CASP7-208ENST00000468790 GPATCH8Q9UKJ3 1502 aaKnown RBP15.08■□□□□ 0.01
CASP7-208ENST00000468790 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
CASP7-208ENST00000468790 TRIM52Q96A61 297 aa15.07■□□□□ 0
CASP7-208ENST00000468790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.06■□□□□ 0
CASP7-208ENST00000468790 CROCC2H7BZ55 1655 aa15.06■□□□□ 0
CASP7-208ENST00000468790 C3P01024 1663 aa15.05■□□□□ -0
CASP7-208ENST00000468790 SAMD9LQ8IVG5 1584 aa15.04■□□□□ -0
CASP7-208ENST00000468790 CPS1P31327 1500 aa15.04■□□□□ -0
CASP7-208ENST00000468790 DNMT1P26358 1616 aaKnown RBP15.03■□□□□ -0
CASP7-208ENST00000468790 ARHGAP5Q13017 1502 aa15.03■□□□□ -0
CASP7-208ENST00000468790 ZFYVE16Q7Z3T8 1539 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms