RNA–Protein interactions for RNA: ENST00000468655.1

RPL13A-203, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 407 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-203ENST00000468655 UHRF1BP1Q6BDS2 1440 aa15.62■□□□□ 0.09
RPL13A-203ENST00000468655 CEBPAP49715 358 aaPredicted RBP15.6■□□□□ 0.09
RPL13A-203ENST00000468655 CFAP74Q9C0B2 1584 aa15.59■□□□□ 0.09
RPL13A-203ENST00000468655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
RPL13A-203ENST00000468655 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
RPL13A-203ENST00000468655 HECW1Q76N89 1606 aa15.56■□□□□ 0.08
RPL13A-203ENST00000468655 SETD1BQ9UPS6 1966 aaKnown RBP15.56■□□□□ 0.08
RPL13A-203ENST00000468655 ATP10AO60312 1499 aa15.54■□□□□ 0.08
RPL13A-203ENST00000468655 C9orf84Q5VXU9 1444 aa15.54■□□□□ 0.08
RPL13A-203ENST00000468655 P3H3Q8IVL6 736 aa15.54■□□□□ 0.08
RPL13A-203ENST00000468655 RAPGEF6Q8TEU7 1601 aa15.54■□□□□ 0.08
RPL13A-203ENST00000468655 NUP153P49790 1475 aaKnown RBP15.52■□□□□ 0.08
RPL13A-203ENST00000468655 UBAP1LF5GYI3 381 aa15.51■□□□□ 0.07
RPL13A-203ENST00000468655 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
RPL13A-203ENST00000468655 NCOA1Q15788 1441 aa15.51■□□□□ 0.07
RPL13A-203ENST00000468655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.5■□□□□ 0.07
RPL13A-203ENST00000468655 PLEKHD1A6NEE1 506 aa15.49■□□□□ 0.07
RPL13A-203ENST00000468655 SCAPERQ9BY12 1400 aa15.49■□□□□ 0.07
RPL13A-203ENST00000468655 MED1Q15648 1581 aaPredicted RBP15.48■□□□□ 0.07
RPL13A-203ENST00000468655 SAMD9Q5K651 1589 aa15.47■□□□□ 0.07
RPL13A-203ENST00000468655 PCGF6Q9BYE7 350 aa15.46■□□□□ 0.07
RPL13A-203ENST00000468655 TRAPPC8Q9Y2L5 1435 aa15.45■□□□□ 0.06
RPL13A-203ENST00000468655 ZEB1P37275 1124 aaPredicted RBP15.44■□□□□ 0.06
RPL13A-203ENST00000468655 ZNF335Q9H4Z2 1342 aaPredicted RBP15.43■□□□□ 0.06
RPL13A-203ENST00000468655 PLCH2O75038 1416 aa15.42■□□□□ 0.06
RPL13A-203ENST00000468655 C3P01024 1663 aa15.41■□□□□ 0.06
RPL13A-203ENST00000468655 HSPA1LP34931 641 aa15.4■□□□□ 0.06
RPL13A-203ENST00000468655 REREQ9P2R6 1566 aa15.38■□□□□ 0.05
RPL13A-203ENST00000468655 CAMSAP1Q5T5Y3 1602 aa15.38■□□□□ 0.05
RPL13A-203ENST00000468655 ZNF518AQ6AHZ1 1483 aa15.38■□□□□ 0.05
RPL13A-203ENST00000468655 KDM5CP41229 1560 aa15.36■□□□□ 0.05
RPL13A-203ENST00000468655 AGLP35573 1532 aa15.35■□□□□ 0.05
RPL13A-203ENST00000468655 EFCAB2Q5VUJ9 269 aa15.35■□□□□ 0.05
RPL13A-203ENST00000468655 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
RPL13A-203ENST00000468655 ESF1Q9H501 851 aaKnown RBP15.35■□□□□ 0.05
RPL13A-203ENST00000468655 CNTLNQ9NXG0 1405 aa15.34■□□□□ 0.05
RPL13A-203ENST00000468655 DIP2CQ9Y2E4 1556 aa15.34■□□□□ 0.05
RPL13A-203ENST00000468655 TRIM26Q12899 539 aaPredicted RBP15.34■□□□□ 0.05
RPL13A-203ENST00000468655 NCKAP5LQ9HCH0 1330 aa15.34■□□□□ 0.05
RPL13A-203ENST00000468655 NPATQ14207 1427 aa15.34■□□□□ 0.05
RPL13A-203ENST00000468655 PKD2Q13563 968 aa15.32■□□□□ 0.04
RPL13A-203ENST00000468655 AFAP1Q8N556 730 aa15.32■□□□□ 0.04
RPL13A-203ENST00000468655 PLA2R1Q13018 1463 aa15.32■□□□□ 0.04
RPL13A-203ENST00000468655 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
RPL13A-203ENST00000468655 PIP4K2BP78356 416 aa15.3■□□□□ 0.04
RPL13A-203ENST00000468655 TCOF1Q13428 1488 aaKnown RBP15.3■□□□□ 0.04
RPL13A-203ENST00000468655 MLH3Q9UHC1 1453 aa15.29■□□□□ 0.04
RPL13A-203ENST00000468655 TOM1O60784 492 aa15.29■□□□□ 0.04
RPL13A-203ENST00000468655 MYT1Q01538 1121 aa15.29■□□□□ 0.04
RPL13A-203ENST00000468655 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
RPL13A-203ENST00000468655 CDK13Q14004 1512 aaKnown RBP15.27■□□□□ 0.04
RPL13A-203ENST00000468655 PPARGC1BQ86YN6 1023 aaKnown RBP15.27■□□□□ 0.04
RPL13A-203ENST00000468655 MYT1LQ9UL68 1186 aa15.27■□□□□ 0.04
RPL13A-203ENST00000468655 MYO5CQ9NQX4 1742 aa15.26■□□□□ 0.03
RPL13A-203ENST00000468655 PPP6R1Q9UPN7 881 aa15.26■□□□□ 0.03
RPL13A-203ENST00000468655 ZMYM3Q14202 1370 aa15.24■□□□□ 0.03
RPL13A-203ENST00000468655 MROH2AA6NES4 1674 aa15.23■□□□□ 0.03
RPL13A-203ENST00000468655 ZNF142P52746 1687 aaPredicted RBP15.23■□□□□ 0.03
RPL13A-203ENST00000468655 CPS1P31327 1500 aa15.22■□□□□ 0.03
RPL13A-203ENST00000468655 ARHGAP5Q13017 1502 aa15.22■□□□□ 0.03
RPL13A-203ENST00000468655 CEP170BQ9Y4F5 1589 aaPredicted RBP15.21■□□□□ 0.03
RPL13A-203ENST00000468655 MYO3AQ8NEV4 1616 aa15.21■□□□□ 0.02
RPL13A-203ENST00000468655 RANGAP1P46060 587 aaPredicted RBP15.2■□□□□ 0.02
RPL13A-203ENST00000468655 PTPRKQ15262 1439 aa15.19■□□□□ 0.02
RPL13A-203ENST00000468655 SHANK2Q9UPX8 1470 aa15.17■□□□□ 0.02
RPL13A-203ENST00000468655 RGS17Q9UGC6 210 aaPredicted RBP15.17■□□□□ 0.02
RPL13A-203ENST00000468655 KIF14Q15058 1648 aa15.17■□□□□ 0.02
RPL13A-203ENST00000468655 ALKQ9UM73 1620 aa15.17■□□□□ 0.02
RPL13A-203ENST00000468655 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
RPL13A-203ENST00000468655 CDK11AQ9UQ88 783 aaPredicted RBP15.16■□□□□ 0.02
RPL13A-203ENST00000468655 ABCC1P33527 1531 aa15.14■□□□□ 0.01
RPL13A-203ENST00000468655 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
RPL13A-203ENST00000468655 KIDINS220Q9ULH0 1771 aa15.13■□□□□ 0.01
RPL13A-203ENST00000468655 SUPT6HQ7KZ85 1726 aaKnown RBP15.13■□□□□ 0.01
RPL13A-203ENST00000468655 A2ML1A8K2U0 1454 aa15.12■□□□□ 0.01
RPL13A-203ENST00000468655 NEURL4Q96JN8 1562 aa15.11■□□□□ 0.01
RPL13A-203ENST00000468655 CLIP1P30622 1438 aa15.1■□□□□ 0.01
RPL13A-203ENST00000468655 VWDEQ8N2E2 1590 aa15.09■□□□□ 0.01
RPL13A-203ENST00000468655 DNMT1P26358 1616 aaKnown RBP15.09■□□□□ 0.01
RPL13A-203ENST00000468655 CLTCQ00610 1675 aaKnown RBP15.09■□□□□ 0.01
RPL13A-203ENST00000468655 ITSN2Q9NZM3 1697 aa15.09■□□□□ 0.01
RPL13A-203ENST00000468655 CDC42BPBQ9Y5S2 1711 aa15.09■□□□□ 0.01
RPL13A-203ENST00000468655 ATP1B4Q9UN42 357 aaPredicted RBP15.06■□□□□ 0
RPL13A-203ENST00000468655 FMN1Q68DA7 1419 aa15.06■□□□□ 0
RPL13A-203ENST00000468655 PREX2Q70Z35 1606 aa15.06■□□□□ 0
RPL13A-203ENST00000468655 POLR1AO95602 1720 aaPredicted RBP15.06■□□□□ 0
RPL13A-203ENST00000468655 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
RPL13A-203ENST00000468655 PLXNC1O60486 1568 aa15.05■□□□□ -0
RPL13A-203ENST00000468655 SAMD9LQ8IVG5 1584 aa15.05■□□□□ -0
RPL13A-203ENST00000468655 SRCAPQ6ZRS2 3230 aa15.04■□□□□ -0
RPL13A-203ENST00000468655 POTEAQ6S8J7 498 aa15.04■□□□□ -0
RPL13A-203ENST00000468655 SPAG9O60271 1321 aaKnown RBP15.02■□□□□ -0
RPL13A-203ENST00000468655 ANKLE2Q86XL3 938 aa15.01□□□□□ -0.01
RPL13A-203ENST00000468655 RNF17Q9BXT8 1623 aaKnown RBP15.01□□□□□ -0.01
RPL13A-203ENST00000468655 LRRC7Q96NW7 1537 aa15.01□□□□□ -0.01
RPL13A-203ENST00000468655 MED14O60244 1454 aa15.01□□□□□ -0.01
RPL13A-203ENST00000468655 A2MP01023 1474 aa15.01□□□□□ -0.01
RPL13A-203ENST00000468655 GGT6Q6P531 493 aa15□□□□□ -0.01
RPL13A-203ENST00000468655 NPHP4O75161 1426 aaPredicted RBP15□□□□□ -0.01
RPL13A-203ENST00000468655 EEA1Q15075 1411 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms